RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 ZNF777Q9ULD5 760 aaPredicted RBP6.4□□□□□ -1.38
RNU4-49P-201ENST00000516080 SPDYE3A6NKU9 549 aa6.39□□□□□ -1.39
RNU4-49P-201ENST00000516080 TGFBR3LH3BV60 316 aa6.38□□□□□ -1.39
RNU4-49P-201ENST00000516080 ADH7P40394 386 aa6.38□□□□□ -1.39
RNU4-49P-201ENST00000516080 CFAP70Q5T0N1 1121 aa6.38□□□□□ -1.39
RNU4-49P-201ENST00000516080 FAM200AQ8TCP9 573 aa6.38□□□□□ -1.39
RNU4-49P-201ENST00000516080 TRIM11Q96F44 468 aa6.38□□□□□ -1.39
RNU4-49P-201ENST00000516080 ARXQ96QS3 562 aa6.38□□□□□ -1.39
RNU4-49P-201ENST00000516080 PLVAPQ9BX97 442 aa6.38□□□□□ -1.39
RNU4-49P-201ENST00000516080 PRDM6Q9NQX0 595 aa6.38□□□□□ -1.39
RNU4-49P-201ENST00000516080 FOXO3O43524 673 aa6.37□□□□□ -1.39
RNU4-49P-201ENST00000516080 RFX1P22670 979 aa6.37□□□□□ -1.39
RNU4-49P-201ENST00000516080 WEE1P30291 646 aa6.37□□□□□ -1.39
RNU4-49P-201ENST00000516080 RAB44Q7Z6P3 723 aaPredicted RBP6.37□□□□□ -1.39
RNU4-49P-201ENST00000516080 BHMTQ93088 406 aa6.37□□□□□ -1.39
RNU4-49P-201ENST00000516080 VTI1AQ96AJ9 217 aa6.37□□□□□ -1.39
RNU4-49P-201ENST00000516080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.37□□□□□ -1.39
RNU4-49P-201ENST00000516080 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 C1QTNF9BB2RNN3 333 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 M0R082 166 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 LGR5O75473 907 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 SPATA31C1P0DKV0 1188 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 EPB42P16452 691 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 BAG6P46379 1132 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 PRRT3Q5FWE3 981 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 CD163Q86VB7 1156 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 ZNF417Q8TAU3 575 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 ZNF587Q96SQ5 575 aaPredicted RBP6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 KRTAP4-6Q9BYQ5 205 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 STARD13Q9Y3M8 1113 aa6.36□□□□□ -1.39
RNU4-49P-201ENST00000516080 ADAM23O75077 832 aa6.35□□□□□ -1.39
RNU4-49P-201ENST00000516080 MICALL1Q8N3F8 863 aa6.35□□□□□ -1.39
RNU4-49P-201ENST00000516080 PNMA5Q96PV4 448 aa6.35□□□□□ -1.39
RNU4-49P-201ENST00000516080 DMGDHQ9UI17 866 aaKnown RBP6.35□□□□□ -1.39
RNU4-49P-201ENST00000516080 ALBP02768 609 aa6.34□□□□□ -1.39
RNU4-49P-201ENST00000516080 CCINQ13939 588 aa6.34□□□□□ -1.39
RNU4-49P-201ENST00000516080 GSX2Q9BZM3 304 aa6.34□□□□□ -1.39
RNU4-49P-201ENST00000516080 UBE2OQ9C0C9 1292 aaKnown RBP6.34□□□□□ -1.39
RNU4-49P-201ENST00000516080 C11orf16Q9NQ32 467 aa6.34□□□□□ -1.39
RNU4-49P-201ENST00000516080 NOVA2Q9UNW9 492 aaKnown RBP6.34□□□□□ -1.39
RNU4-49P-201ENST00000516080 BCS1LQ9Y276 419 aa6.34□□□□□ -1.39
RNU4-49P-201ENST00000516080 K7ELQ4 463 aaPredicted RBP6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 CHRNA4P43681 627 aa6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 TBC1D8BQ0IIM8 1120 aa6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 DGKZQ13574 1117 aa6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 PCSK7Q16549 785 aa6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 SWI5Q1ZZU3 235 aa6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 C11orf91Q3C1V1 193 aa6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 CDCA8Q53HL2 280 aa6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 C20orf204Q6ZNR8 217 aa6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 MYO19Q96H55 970 aa6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 KLK14Q9P0G3 267 aa6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.33□□□□□ -1.4
RNU4-49P-201ENST00000516080 LILRB5O75023 590 aa6.32□□□□□ -1.4
RNU4-49P-201ENST00000516080 APBA3O96018 575 aa6.32□□□□□ -1.4
RNU4-49P-201ENST00000516080 INPP5BP32019 993 aa6.32□□□□□ -1.4
RNU4-49P-201ENST00000516080 IDH3AP50213 366 aa6.32□□□□□ -1.4
RNU4-49P-201ENST00000516080 ARSDP51689 593 aa6.32□□□□□ -1.4
RNU4-49P-201ENST00000516080 TRIM28Q13263 835 aaKnown RBP6.32□□□□□ -1.4
RNU4-49P-201ENST00000516080 COL9A3Q14050 684 aaPredicted RBP6.32□□□□□ -1.4
RNU4-49P-201ENST00000516080 ELOAQ14241 798 aaKnown RBP6.32□□□□□ -1.4
RNU4-49P-201ENST00000516080 IGFLR1Q9H665 355 aa6.32□□□□□ -1.4
RNU4-49P-201ENST00000516080 QTRT2Q9H974 415 aaKnown RBP6.32□□□□□ -1.4
RNU4-49P-201ENST00000516080 SLC6A14Q9UN76 642 aa6.32□□□□□ -1.4
RNU4-49P-201ENST00000516080 ACIN1Q9UKV3 1341 aaKnown RBP6.31□□□□□ -1.4
RNU4-49P-201ENST00000516080 MICAL2O94851 1124 aa6.31□□□□□ -1.4
RNU4-49P-201ENST00000516080 MAP3K6O95382 1288 aa6.31□□□□□ -1.4
RNU4-49P-201ENST00000516080 NFKB1P19838 968 aa6.31□□□□□ -1.4
RNU4-49P-201ENST00000516080 NACC1Q96RE7 527 aa6.31□□□□□ -1.4
RNU4-49P-201ENST00000516080 DNAJB12Q9NXW2 375 aaKnown RBP6.31□□□□□ -1.4
RNU4-49P-201ENST00000516080 FURINP09958 794 aa6.3□□□□□ -1.4
RNU4-49P-201ENST00000516080 NID1P14543 1247 aa6.3□□□□□ -1.4
RNU4-49P-201ENST00000516080 GATA4P43694 442 aa6.3□□□□□ -1.4
RNU4-49P-201ENST00000516080 C8orf86Q6ZUL3 223 aa6.3□□□□□ -1.4
RNU4-49P-201ENST00000516080 IFT43Q96FT9 208 aa6.3□□□□□ -1.4
RNU4-49P-201ENST00000516080 ARID4AP29374 1257 aaPredicted RBP6.29□□□□□ -1.4
RNU4-49P-201ENST00000516080 TRAPPC3LQ5T215 181 aa6.29□□□□□ -1.4
RNU4-49P-201ENST00000516080 ZMYND15Q9H091 742 aa6.29□□□□□ -1.4
RNU4-49P-201ENST00000516080 JPH1Q9HDC5 661 aaPredicted RBP6.29□□□□□ -1.4
RNU4-49P-201ENST00000516080 RGS9O75916 674 aaPredicted RBP6.28□□□□□ -1.4
RNU4-49P-201ENST00000516080 GRNP28799 593 aaKnown RBP6.28□□□□□ -1.4
RNU4-49P-201ENST00000516080 RAC1P63000 192 aa6.28□□□□□ -1.4
RNU4-49P-201ENST00000516080 FKBP5Q13451 457 aaPredicted RBP6.28□□□□□ -1.4
RNU4-49P-201ENST00000516080 PSAPL1Q6NUJ1 521 aa6.28□□□□□ -1.4
RNU4-49P-201ENST00000516080 PRIMPOLQ96LW4 560 aa6.28□□□□□ -1.4
RNU4-49P-201ENST00000516080 ZMIZ1Q9ULJ6 1067 aa6.28□□□□□ -1.4
RNU4-49P-201ENST00000516080 FAM229AH3BQW9 127 aa6.27□□□□□ -1.41
RNU4-49P-201ENST00000516080 OPLAHO14841 1288 aa6.27□□□□□ -1.41
RNU4-49P-201ENST00000516080 PRMT3O60678 531 aa6.27□□□□□ -1.41
RNU4-49P-201ENST00000516080 ATG7O95352 703 aa6.27□□□□□ -1.41
RNU4-49P-201ENST00000516080 FAM35AQ86V20 835 aa6.27□□□□□ -1.41
RNU4-49P-201ENST00000516080 NUDT8Q8WV74 236 aa6.27□□□□□ -1.41
RNU4-49P-201ENST00000516080 COL26A1Q96A83 441 aa6.27□□□□□ -1.41
RNU4-49P-201ENST00000516080 LRFN2Q9ULH4 789 aa6.27□□□□□ -1.41
RNU4-49P-201ENST00000516080 RTCBQ9Y3I0 505 aaKnown RBP6.27□□□□□ -1.41
RNU4-49P-201ENST00000516080 EGFRP00533 1210 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 RARAP10276 462 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 ELNP15502 786 aa6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 TARSP26639 723 aaKnown RBP6.26□□□□□ -1.41
RNU4-49P-201ENST00000516080 AFF1P51825 1210 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms