RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
ABCC3-216ENST00000515585 C9orf78Q9NZ63 289 aaPredicted RBP17.23■□□□□ 0.35
ABCC3-216ENST00000515585 CASZ1Q86V15 1759 aa17.22■□□□□ 0.35
ABCC3-216ENST00000515585 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
ABCC3-216ENST00000515585 CEP350Q5VT06 3117 aa17.21■□□□□ 0.35
ABCC3-216ENST00000515585 ATP5J2-PTCD1G3V325 749 aa17.21■□□□□ 0.35
ABCC3-216ENST00000515585 CAMTA2O94983 1202 aa17.21■□□□□ 0.35
ABCC3-216ENST00000515585 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
ABCC3-216ENST00000515585 CHD1LQ86WJ1 897 aa17.21■□□□□ 0.35
ABCC3-216ENST00000515585 CWC25Q9NXE8 425 aaPredicted RBP17.21■□□□□ 0.35
ABCC3-216ENST00000515585 HLFQ16534 295 aa17.2■□□□□ 0.34
ABCC3-216ENST00000515585 HSP90AB3PQ58FF7 597 aa17.2■□□□□ 0.34
ABCC3-216ENST00000515585 DZIP3Q86Y13 1208 aaKnown RBP17.2■□□□□ 0.34
ABCC3-216ENST00000515585 ZNF34Q8IZ26 560 aa17.2■□□□□ 0.34
ABCC3-216ENST00000515585 NOP58Q9Y2X3 529 aaKnown RBP17.2■□□□□ 0.34
ABCC3-216ENST00000515585 EPHA10Q5JZY3 1008 aa17.19■□□□□ 0.34
ABCC3-216ENST00000515585 TSHZ2Q9NRE2 1034 aa17.19■□□□□ 0.34
ABCC3-216ENST00000515585 CCNL1Q9UK58 526 aaPredicted RBP17.19■□□□□ 0.34
ABCC3-216ENST00000515585 A0A087WZG4 1122 aa17.18■□□□□ 0.34
ABCC3-216ENST00000515585 RPS6KA4O75676 772 aa17.18■□□□□ 0.34
ABCC3-216ENST00000515585 PLA2G12BQ9BX93 195 aa17.18■□□□□ 0.34
ABCC3-216ENST00000515585 BICC1Q9H694 974 aaKnown RBP17.18■□□□□ 0.34
ABCC3-216ENST00000515585 CDHR2Q9BYE9 1310 aa17.18■□□□□ 0.34
ABCC3-216ENST00000515585 PCCAP05165 728 aaPredicted RBP17.17■□□□□ 0.34
ABCC3-216ENST00000515585 FOXO4P98177 505 aa17.17■□□□□ 0.34
ABCC3-216ENST00000515585 UBE3BQ7Z3V4 1068 aa17.17■□□□□ 0.34
ABCC3-216ENST00000515585 NLRP10Q86W26 655 aa17.17■□□□□ 0.34
ABCC3-216ENST00000515585 LRRC4BQ9NT99 713 aa17.17■□□□□ 0.34
ABCC3-216ENST00000515585 SALL3Q9BXA9 1300 aa17.17■□□□□ 0.34
ABCC3-216ENST00000515585 SRGAP3O43295 1099 aa17.16■□□□□ 0.34
ABCC3-216ENST00000515585 ZBTB7AO95365 584 aa17.16■□□□□ 0.34
ABCC3-216ENST00000515585 PTGER2P43116 358 aa17.16■□□□□ 0.34
ABCC3-216ENST00000515585 RFX5P48382 616 aaPredicted RBP17.16■□□□□ 0.34
ABCC3-216ENST00000515585 RGS3P49796 1198 aa17.16■□□□□ 0.34
ABCC3-216ENST00000515585 KCNQ4P56696 695 aa17.16■□□□□ 0.34
ABCC3-216ENST00000515585 SLC27A3Q5K4L6 730 aa17.16■□□□□ 0.34
ABCC3-216ENST00000515585 SYT17Q9BSW7 474 aa17.16■□□□□ 0.34
ABCC3-216ENST00000515585 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
ABCC3-216ENST00000515585 PDGFDQ9GZP0 370 aaPredicted RBP17.16■□□□□ 0.34
ABCC3-216ENST00000515585 ANO8Q9HCE9 1232 aaPredicted RBP17.16■□□□□ 0.34
ABCC3-216ENST00000515585 TBC1D2BQ9UPU7 963 aa17.16■□□□□ 0.34
ABCC3-216ENST00000515585 UBN2Q6ZU65 1347 aa17.16■□□□□ 0.34
ABCC3-216ENST00000515585 PLSCR1O15162 318 aa17.15■□□□□ 0.34
ABCC3-216ENST00000515585 ANKRD45Q5TZF3 282 aa17.15■□□□□ 0.34
ABCC3-216ENST00000515585 ZNF330Q9Y3S2 320 aaPredicted RBP17.15■□□□□ 0.34
ABCC3-216ENST00000515585 QSER1Q2KHR3 1735 aa17.14■□□□□ 0.33
ABCC3-216ENST00000515585 CLEC4GQ6UXB4 293 aa17.14■□□□□ 0.33
ABCC3-216ENST00000515585 PROM2Q8N271 834 aa17.14■□□□□ 0.33
ABCC3-216ENST00000515585 ZBTB38Q8NAP3 1195 aaPredicted RBP17.14■□□□□ 0.33
ABCC3-216ENST00000515585 ATF5Q9Y2D1 282 aaPredicted RBP17.14■□□□□ 0.33
ABCC3-216ENST00000515585 EXOC6BQ9Y2D4 811 aa17.14■□□□□ 0.33
ABCC3-216ENST00000515585 RAB11FIP3O75154 756 aa17.13■□□□□ 0.33
ABCC3-216ENST00000515585 AMIGO3Q86WK7 504 aa17.13■□□□□ 0.33
ABCC3-216ENST00000515585 FHDC1Q9C0D6 1143 aaPredicted RBP17.13■□□□□ 0.33
ABCC3-216ENST00000515585 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
ABCC3-216ENST00000515585 COPRSQ9NQ92 184 aa17.13■□□□□ 0.33
ABCC3-216ENST00000515585 C8orf34Q49A92 452 aa17.12■□□□□ 0.33
ABCC3-216ENST00000515585 PLEKHM2Q8IWE5 1019 aa17.12■□□□□ 0.33
ABCC3-216ENST00000515585 BACH2Q9BYV9 841 aa17.12■□□□□ 0.33
ABCC3-216ENST00000515585 NARFQ9UHQ1 456 aa17.12■□□□□ 0.33
ABCC3-216ENST00000515585 CSF1RP07333 972 aa17.11■□□□□ 0.33
ABCC3-216ENST00000515585 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
ABCC3-216ENST00000515585 JARID2Q92833 1246 aaPredicted RBP17.11■□□□□ 0.33
ABCC3-216ENST00000515585 LRRCC1Q9C099 1032 aa17.11■□□□□ 0.33
ABCC3-216ENST00000515585 OSBPL3Q9H4L5 887 aa17.11■□□□□ 0.33
ABCC3-216ENST00000515585 ADRA2BP18089 450 aa17.1■□□□□ 0.33
ABCC3-216ENST00000515585 TXNRD1Q16881 649 aa17.1■□□□□ 0.33
ABCC3-216ENST00000515585 PARP10Q53GL7 1025 aa17.1■□□□□ 0.33
ABCC3-216ENST00000515585 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
ABCC3-216ENST00000515585 GNPATO15228 680 aa17.09■□□□□ 0.33
ABCC3-216ENST00000515585 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
ABCC3-216ENST00000515585 SURF6O75683 361 aaKnown RBP17.09■□□□□ 0.33
ABCC3-216ENST00000515585 GPTP24298 496 aa17.09■□□□□ 0.33
ABCC3-216ENST00000515585 HMGB2P26583 209 aaKnown RBP17.09■□□□□ 0.33
ABCC3-216ENST00000515585 PTPN12Q05209 780 aaKnown RBP17.09■□□□□ 0.33
ABCC3-216ENST00000515585 RHPN1Q8TCX5 695 aa17.09■□□□□ 0.33
ABCC3-216ENST00000515585 AK7Q96M32 723 aa17.09■□□□□ 0.33
ABCC3-216ENST00000515585 RTCBQ9Y3I0 505 aaKnown RBP17.09■□□□□ 0.33
ABCC3-216ENST00000515585 USP42Q9H9J4 1324 aaKnown RBP17.09■□□□□ 0.33
ABCC3-216ENST00000515585 A0A1B0GUL6 1792 aa17.08■□□□□ 0.33
ABCC3-216ENST00000515585 NTSR2O95665 410 aa17.08■□□□□ 0.32
ABCC3-216ENST00000515585 FAM161AQ3B820 660 aa17.08■□□□□ 0.32
ABCC3-216ENST00000515585 BMP2KLQ5H9B9 411 aa17.08■□□□□ 0.32
ABCC3-216ENST00000515585 SUSD4Q5VX71 490 aa17.08■□□□□ 0.32
ABCC3-216ENST00000515585 LMBR1LQ6UX01 489 aa17.08■□□□□ 0.32
ABCC3-216ENST00000515585 C16orf71Q8IYS4 520 aaPredicted RBP17.08■□□□□ 0.32
ABCC3-216ENST00000515585 OTUD7AQ8TE49 926 aaPredicted RBP17.08■□□□□ 0.32
ABCC3-216ENST00000515585 KIF1BPQ96EK5 621 aa17.08■□□□□ 0.32
ABCC3-216ENST00000515585 STAP2Q9UGK3 403 aa17.08■□□□□ 0.32
ABCC3-216ENST00000515585 PA2G4Q9UQ80 394 aaKnown RBP17.08■□□□□ 0.32
ABCC3-216ENST00000515585 ZNF652Q9Y2D9 606 aa17.08■□□□□ 0.32
ABCC3-216ENST00000515585 SASH1O94885 1247 aa17.07■□□□□ 0.32
ABCC3-216ENST00000515585 ARHGEF1Q92888 912 aaKnown RBP17.07■□□□□ 0.32
ABCC3-216ENST00000515585 FAM89AQ96GI7 184 aa17.07■□□□□ 0.32
ABCC3-216ENST00000515585 AK9Q5TCS8 1911 aa17.07■□□□□ 0.32
ABCC3-216ENST00000515585 RTL9Q8NET4 1388 aa17.06■□□□□ 0.32
ABCC3-216ENST00000515585 AOX1Q06278 1338 aa17.06■□□□□ 0.32
ABCC3-216ENST00000515585 SSFA2P28290 1259 aa17.06■□□□□ 0.32
ABCC3-216ENST00000515585 ERC1Q8IUD2 1116 aa17.06■□□□□ 0.32
ABCC3-216ENST00000515585 SYNE4Q8N205 404 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms