RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 TRMT112Q9UI30 125 aaKnown RBP26.48■■□□□ 1.83
TRIM41-208ENST00000515499 PDE6BP35913 854 aa26.47■■□□□ 1.83
TRIM41-208ENST00000515499 ERFEQ4G0M1 354 aa26.47■■□□□ 1.83
TRIM41-208ENST00000515499 NUTM1Q86Y26 1132 aa26.47■■□□□ 1.83
TRIM41-208ENST00000515499 CWC25Q9NXE8 425 aaPredicted RBP26.47■■□□□ 1.83
TRIM41-208ENST00000515499 NOB1Q9ULX3 412 aaKnown RBP26.47■■□□□ 1.83
TRIM41-208ENST00000515499 KIF16BQ96L93 1317 aa26.46■■□□□ 1.83
TRIM41-208ENST00000515499 BCAR3O75815 825 aa26.46■■□□□ 1.83
TRIM41-208ENST00000515499 LINS1Q8NG48 757 aa26.46■■□□□ 1.83
TRIM41-208ENST00000515499 PDZRN3Q9UPQ7 1066 aa26.46■■□□□ 1.83
TRIM41-208ENST00000515499 SH3TC1Q8TE82 1336 aa26.45■■□□□ 1.83
TRIM41-208ENST00000515499 NEURL1BA8MQ27 555 aa26.45■■□□□ 1.82
TRIM41-208ENST00000515499 SLC10A5Q5PT55 438 aa26.45■■□□□ 1.82
TRIM41-208ENST00000515499 PXDNLA1KZ92 1463 aa26.44■■□□□ 1.82
TRIM41-208ENST00000515499 BEND3Q5T5X7 828 aa26.44■■□□□ 1.82
TRIM41-208ENST00000515499 ARHGAP45Q92619 1136 aa26.44■■□□□ 1.82
TRIM41-208ENST00000515499 ANKRD31Q8N7Z5 1873 aa26.44■■□□□ 1.82
TRIM41-208ENST00000515499 RIC1Q4ADV7 1423 aa26.43■■□□□ 1.82
TRIM41-208ENST00000515499 A0A0G2JLW4 131 aa26.43■■□□□ 1.82
TRIM41-208ENST00000515499 DPEP1P16444 411 aa26.43■■□□□ 1.82
TRIM41-208ENST00000515499 CWF19L2Q2TBE0 894 aaKnown RBP26.43■■□□□ 1.82
TRIM41-208ENST00000515499 ZBTB38Q8NAP3 1195 aaPredicted RBP26.43■■□□□ 1.82
TRIM41-208ENST00000515499 ABCC12Q96J65 1359 aa26.43■■□□□ 1.82
TRIM41-208ENST00000515499 KIAA1551Q9HCM1 1747 aa26.42■■□□□ 1.82
TRIM41-208ENST00000515499 KLRG2A4D1S0 409 aaPredicted RBP26.42■■□□□ 1.82
TRIM41-208ENST00000515499 H0YIN7 160 aa26.42■■□□□ 1.82
TRIM41-208ENST00000515499 IPO8O15397 1037 aaKnown RBP26.42■■□□□ 1.82
TRIM41-208ENST00000515499 SLC4A10Q6U841 1118 aa26.42■■□□□ 1.82
TRIM41-208ENST00000515499 C2CD5Q86YS7 1000 aa26.42■■□□□ 1.82
TRIM41-208ENST00000515499 FAM89AQ96GI7 184 aa26.42■■□□□ 1.82
TRIM41-208ENST00000515499 API5Q9BZZ5 524 aaKnown RBP26.42■■□□□ 1.82
TRIM41-208ENST00000515499 PCCAP05165 728 aaPredicted RBP26.41■■□□□ 1.82
TRIM41-208ENST00000515499 KCNA3P22001 575 aa26.4■■□□□ 1.82
TRIM41-208ENST00000515499 CHRNA5P30532 468 aa26.4■■□□□ 1.82
TRIM41-208ENST00000515499 GCKRQ14397 625 aa26.4■■□□□ 1.82
TRIM41-208ENST00000515499 SYNE4Q8N205 404 aa26.4■■□□□ 1.82
TRIM41-208ENST00000515499 SRCIN1Q9C0H9 1055 aa26.4■■□□□ 1.82
TRIM41-208ENST00000515499 N4BP2Q86UW6 1770 aaPredicted RBP26.4■■□□□ 1.82
TRIM41-208ENST00000515499 ALDH1L1O75891 902 aa26.39■■□□□ 1.82
TRIM41-208ENST00000515499 NLRP3Q96P20 1036 aa26.39■■□□□ 1.82
TRIM41-208ENST00000515499 HSP90B1P14625 803 aaKnown RBP26.38■■□□□ 1.81
TRIM41-208ENST00000515499 FRAT1Q92837 279 aaPredicted RBP26.38■■□□□ 1.81
TRIM41-208ENST00000515499 PIM2Q9P1W9 311 aa26.38■■□□□ 1.81
TRIM41-208ENST00000515499 RCAN3Q9UKA8 241 aa26.38■■□□□ 1.81
TRIM41-208ENST00000515499 H7C1W4 665 aa26.37■■□□□ 1.81
TRIM41-208ENST00000515499 SRGNP10124 158 aa26.37■■□□□ 1.81
TRIM41-208ENST00000515499 HCLS1P14317 486 aaPredicted RBP26.37■■□□□ 1.81
TRIM41-208ENST00000515499 RTL5Q5HYW3 569 aaPredicted RBP26.37■■□□□ 1.81
TRIM41-208ENST00000515499 IRS4O14654 1257 aaPredicted RBP26.36■■□□□ 1.81
TRIM41-208ENST00000515499 CRY2Q49AN0 593 aa26.36■■□□□ 1.81
TRIM41-208ENST00000515499 ATF7IPQ6VMQ6 1270 aa26.36■■□□□ 1.81
TRIM41-208ENST00000515499 MASTLQ96GX5 879 aa26.36■■□□□ 1.81
TRIM41-208ENST00000515499 CDHR2Q9BYE9 1310 aa26.36■■□□□ 1.81
TRIM41-208ENST00000515499 ZKSCAN2Q63HK3 967 aa26.35■■□□□ 1.81
TRIM41-208ENST00000515499 STYK1Q6J9G0 422 aa26.35■■□□□ 1.81
TRIM41-208ENST00000515499 TNRC6CQ9HCJ0 1690 aaKnown RBP26.34■■□□□ 1.81
TRIM41-208ENST00000515499 DLEC1Q9Y238 1755 aa26.34■■□□□ 1.81
TRIM41-208ENST00000515499 NPR1P16066 1061 aa26.34■■□□□ 1.81
TRIM41-208ENST00000515499 CCT4P50991 539 aaKnown RBP26.34■■□□□ 1.81
TRIM41-208ENST00000515499 JARID2Q92833 1246 aaPredicted RBP26.34■■□□□ 1.81
TRIM41-208ENST00000515499 ZNF622Q969S3 477 aaKnown RBP eCLIP26.34■■□□□ 1.813e-8■■■□□ 17.5
TRIM41-208ENST00000515499 TRIM27P14373 513 aa26.33■■□□□ 1.81
TRIM41-208ENST00000515499 C3orf67Q6ZVT6 689 aa26.33■■□□□ 1.81
TRIM41-208ENST00000515499 COL11A2P13942 1736 aaPredicted RBP26.33■■□□□ 1.81
TRIM41-208ENST00000515499 BRCA1P38398 1863 aaKnown RBP26.32■■□□□ 1.8
TRIM41-208ENST00000515499 DDX60Q8IY21 1712 aaKnown RBP26.32■■□□□ 1.8
TRIM41-208ENST00000515499 CASP7P55210 303 aa26.32■■□□□ 1.8
TRIM41-208ENST00000515499 UBE3BQ7Z3V4 1068 aa26.32■■□□□ 1.8
TRIM41-208ENST00000515499 DCAF8L1A6NGE4 600 aa26.31■■□□□ 1.8
TRIM41-208ENST00000515499 GRM8O00222 908 aa26.31■■□□□ 1.8
TRIM41-208ENST00000515499 PDE8AO60658 829 aa26.31■■□□□ 1.8
TRIM41-208ENST00000515499 HOXA10P31260 410 aaPredicted RBP26.31■■□□□ 1.8
TRIM41-208ENST00000515499 SF3B3Q15393 1217 aaKnown RBP26.31■■□□□ 1.8
TRIM41-208ENST00000515499 DALRD3Q5D0E6 543 aaKnown RBP26.31■■□□□ 1.8
TRIM41-208ENST00000515499 TTLL6Q8N841 843 aa26.31■■□□□ 1.8
TRIM41-208ENST00000515499 RPGRQ92834 1020 aaKnown RBP26.31■■□□□ 1.8
TRIM41-208ENST00000515499 CNKSR1Q969H4 720 aa26.31■■□□□ 1.8
TRIM41-208ENST00000515499 C9orf78Q9NZ63 289 aaPredicted RBP26.31■■□□□ 1.8
TRIM41-208ENST00000515499 ABCC4O15439 1325 aa26.31■■□□□ 1.8
TRIM41-208ENST00000515499 GPR162Q16538 588 aa26.3■■□□□ 1.8
TRIM41-208ENST00000515499 WWC3Q9ULE0 1092 aa26.3■■□□□ 1.8
TRIM41-208ENST00000515499 LAMB2P55268 1798 aa26.3■■□□□ 1.8
TRIM41-208ENST00000515499 ALDH1B1P30837 517 aa26.29■■□□□ 1.8
TRIM41-208ENST00000515499 INTS3Q68E01 1043 aaKnown RBP26.29■■□□□ 1.8
TRIM41-208ENST00000515499 PELP1Q8IZL8 1130 aaKnown RBP26.29■■□□□ 1.8
TRIM41-208ENST00000515499 RBM17Q96I25 401 aaKnown RBP26.29■■□□□ 1.8
TRIM41-208ENST00000515499 BCS1LQ9Y276 419 aa26.29■■□□□ 1.8
TRIM41-208ENST00000515499 PLA2G12BQ9BX93 195 aa26.28■■□□□ 1.8
TRIM41-208ENST00000515499 YBX3P16989 372 aaKnown RBP eCLIP26.27■■□□□ 1.8
TRIM41-208ENST00000515499 CRAMP1Q96RY5 1269 aa26.27■■□□□ 1.8
TRIM41-208ENST00000515499 TNNQ9UQP3 1299 aa26.27■■□□□ 1.8
TRIM41-208ENST00000515499 UTYO14607 1347 aa26.27■■□□□ 1.8
TRIM41-208ENST00000515499 CLUAP1Q96AJ1 413 aa26.26■■□□□ 1.79
TRIM41-208ENST00000515499 DDX46Q7L014 1031 aaKnown RBP26.25■■□□□ 1.79
TRIM41-208ENST00000515499 DZIP1LQ8IYY4 767 aaKnown RBP26.25■■□□□ 1.79
TRIM41-208ENST00000515499 USP44Q9H0E7 712 aa26.25■■□□□ 1.79
TRIM41-208ENST00000515499 GRIN3BO60391 1043 aa26.24■■□□□ 1.79
TRIM41-208ENST00000515499 NBPF7P0C2Y1 421 aaPredicted RBP26.24■■□□□ 1.79
TRIM41-208ENST00000515499 MS4A1P11836 297 aa26.24■■□□□ 1.79
TRIM41-208ENST00000515499 CTSWP56202 376 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms