RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 NPHP1O15259 732 aa19.71■□□□□ 0.75
MATR3-239ENST00000514694 RARSP54136 660 aaKnown RBP19.71■□□□□ 0.75
MATR3-239ENST00000514694 TRIM28Q13263 835 aaKnown RBP19.71■□□□□ 0.75
MATR3-239ENST00000514694 UTP14AQ9BVJ6 771 aaKnown RBP19.71■□□□□ 0.75
MATR3-239ENST00000514694 N4BP2Q86UW6 1770 aaPredicted RBP19.7■□□□□ 0.74
MATR3-239ENST00000514694 ST5P78524 1137 aa19.7■□□□□ 0.74
MATR3-239ENST00000514694 CWF19L2Q2TBE0 894 aaKnown RBP19.7■□□□□ 0.74
MATR3-239ENST00000514694 ALDH1L2Q3SY69 923 aa19.7■□□□□ 0.74
MATR3-239ENST00000514694 C3orf67Q6ZVT6 689 aa19.7■□□□□ 0.74
MATR3-239ENST00000514694 NYXQ9GZU5 481 aa19.7■□□□□ 0.74
MATR3-239ENST00000514694 SMC4Q9NTJ3 1288 aa19.7■□□□□ 0.74
MATR3-239ENST00000514694 TNRC6CQ9HCJ0 1690 aaKnown RBP19.7■□□□□ 0.74
MATR3-239ENST00000514694 YBX3P16989 372 aaKnown RBP eCLIP19.69■□□□□ 0.74
MATR3-239ENST00000514694 C2CD5Q86YS7 1000 aa19.69■□□□□ 0.74
MATR3-239ENST00000514694 DNAAF4Q8WXU2 420 aa19.69■□□□□ 0.74
MATR3-239ENST00000514694 TRMT112Q9UI30 125 aaKnown RBP19.69■□□□□ 0.74
MATR3-239ENST00000514694 COL11A2P13942 1736 aaPredicted RBP19.68■□□□□ 0.74
MATR3-239ENST00000514694 GTF2E1P29083 439 aaPredicted RBP19.68■□□□□ 0.74
MATR3-239ENST00000514694 PPP1R42Q7Z4L9 355 aa19.68■□□□□ 0.74
MATR3-239ENST00000514694 JARID2Q92833 1246 aaPredicted RBP19.68■□□□□ 0.74
MATR3-239ENST00000514694 KLRG2A4D1S0 409 aaPredicted RBP19.67■□□□□ 0.74
MATR3-239ENST00000514694 RTL5Q5HYW3 569 aaPredicted RBP19.67■□□□□ 0.74
MATR3-239ENST00000514694 FAM89AQ96GI7 184 aa19.67■□□□□ 0.74
MATR3-239ENST00000514694 NEURL1BA8MQ27 555 aa19.66■□□□□ 0.74
MATR3-239ENST00000514694 BCAR3O75815 825 aa19.66■□□□□ 0.74
MATR3-239ENST00000514694 HCLS1P14317 486 aaPredicted RBP19.66■□□□□ 0.74
MATR3-239ENST00000514694 PDE6BP35913 854 aa19.66■□□□□ 0.74
MATR3-239ENST00000514694 PELP1Q8IZL8 1130 aaKnown RBP19.66■□□□□ 0.74
MATR3-239ENST00000514694 CCDC191Q8NCU4 936 aa19.66■□□□□ 0.74
MATR3-239ENST00000514694 CACNA1FO60840 1977 aa19.66■□□□□ 0.74
MATR3-239ENST00000514694 H0YIN7 160 aa19.65■□□□□ 0.74
MATR3-239ENST00000514694 SRGNP10124 158 aa19.65■□□□□ 0.74
MATR3-239ENST00000514694 BRPF1P55201 1214 aaPredicted RBP19.65■□□□□ 0.74
MATR3-239ENST00000514694 SLC10A5Q5PT55 438 aa19.65■□□□□ 0.74
MATR3-239ENST00000514694 BEND3Q5T5X7 828 aa19.65■□□□□ 0.74
MATR3-239ENST00000514694 CWC25Q9NXE8 425 aaPredicted RBP19.65■□□□□ 0.74
MATR3-239ENST00000514694 SH3TC1Q8TE82 1336 aa19.65■□□□□ 0.74
MATR3-239ENST00000514694 RIC1Q4ADV7 1423 aa19.65■□□□□ 0.74
MATR3-239ENST00000514694 NOB1Q9ULX3 412 aaKnown RBP19.64■□□□□ 0.73
MATR3-239ENST00000514694 PTPRCP08575 1304 aa19.64■□□□□ 0.73
MATR3-239ENST00000514694 RNF123Q5XPI4 1314 aa19.64■□□□□ 0.73
MATR3-239ENST00000514694 BRCA1P38398 1863 aaKnown RBP19.63■□□□□ 0.73
MATR3-239ENST00000514694 NEXNQ0ZGT2 675 aa19.63■□□□□ 0.73
MATR3-239ENST00000514694 CRY2Q49AN0 593 aa19.63■□□□□ 0.73
MATR3-239ENST00000514694 ZBTB38Q8NAP3 1195 aaPredicted RBP19.63■□□□□ 0.73
MATR3-239ENST00000514694 LINS1Q8NG48 757 aa19.63■□□□□ 0.73
MATR3-239ENST00000514694 PIM2Q9P1W9 311 aa19.63■□□□□ 0.73
MATR3-239ENST00000514694 GCKRQ14397 625 aa19.62■□□□□ 0.73
MATR3-239ENST00000514694 GPR162Q16538 588 aa19.62■□□□□ 0.73
MATR3-239ENST00000514694 SLC4A10Q6U841 1118 aa19.62■□□□□ 0.73
MATR3-239ENST00000514694 ZNF622Q969S3 477 aaKnown RBP eCLIP19.62■□□□□ 0.73
MATR3-239ENST00000514694 BCS1LQ9Y276 419 aa19.62■□□□□ 0.73
MATR3-239ENST00000514694 DLEC1Q9Y238 1755 aa19.62■□□□□ 0.73
MATR3-239ENST00000514694 IRS4O14654 1257 aaPredicted RBP19.61■□□□□ 0.73
MATR3-239ENST00000514694 PCCAP05165 728 aaPredicted RBP19.61■□□□□ 0.73
MATR3-239ENST00000514694 DALRD3Q5D0E6 543 aaKnown RBP19.61■□□□□ 0.73
MATR3-239ENST00000514694 TNNQ9UQP3 1299 aa19.61■□□□□ 0.73
MATR3-239ENST00000514694 DDX60Q8IY21 1712 aaKnown RBP19.6■□□□□ 0.73
MATR3-239ENST00000514694 STYK1Q6J9G0 422 aa19.6■□□□□ 0.73
MATR3-239ENST00000514694 SLC51AQ86UW1 340 aa19.6■□□□□ 0.73
MATR3-239ENST00000514694 MASTLQ96GX5 879 aa19.6■□□□□ 0.73
MATR3-239ENST00000514694 H7C1W4 665 aa19.59■□□□□ 0.73
MATR3-239ENST00000514694 NPR1P16066 1061 aa19.59■□□□□ 0.73
MATR3-239ENST00000514694 CASP7P55210 303 aa19.59■□□□□ 0.73
MATR3-239ENST00000514694 UBE3BQ7Z3V4 1068 aa19.59■□□□□ 0.73
MATR3-239ENST00000514694 TTLL6Q8N841 843 aa19.59■□□□□ 0.73
MATR3-239ENST00000514694 NLRP3Q96P20 1036 aa19.59■□□□□ 0.73
MATR3-239ENST00000514694 PDZRN3Q9UPQ7 1066 aa19.59■□□□□ 0.73
MATR3-239ENST00000514694 PRPF40BQ6NWY9 871 aaKnown RBP19.58■□□□□ 0.72
MATR3-239ENST00000514694 KIF16BQ96L93 1317 aa19.57■□□□□ 0.72
MATR3-239ENST00000514694 COL4A1P02462 1669 aa19.57■□□□□ 0.72
MATR3-239ENST00000514694 HOXA10P31260 410 aaPredicted RBP19.57■□□□□ 0.72
MATR3-239ENST00000514694 SRCIN1Q9C0H9 1055 aa19.57■□□□□ 0.72
MATR3-239ENST00000514694 CDHR2Q9BYE9 1310 aa19.56■□□□□ 0.72
MATR3-239ENST00000514694 ALDH1L1O75891 902 aa19.56■□□□□ 0.72
MATR3-239ENST00000514694 TRIM27P14373 513 aa19.56■□□□□ 0.72
MATR3-239ENST00000514694 OLFM4Q6UX06 510 aa19.56■□□□□ 0.72
MATR3-239ENST00000514694 FRAT1Q92837 279 aaPredicted RBP19.56■□□□□ 0.72
MATR3-239ENST00000514694 LAMB2P55268 1798 aa19.56■□□□□ 0.72
MATR3-239ENST00000514694 SF3B3Q15393 1217 aaKnown RBP19.55■□□□□ 0.72
MATR3-239ENST00000514694 ARHGAP45Q92619 1136 aa19.55■□□□□ 0.72
MATR3-239ENST00000514694 RPGRQ92834 1020 aaKnown RBP19.55■□□□□ 0.72
MATR3-239ENST00000514694 CNKSR1Q969H4 720 aa19.55■□□□□ 0.72
MATR3-239ENST00000514694 API5Q9BZZ5 524 aaKnown RBP19.55■□□□□ 0.72
MATR3-239ENST00000514694 ZNF219Q9P2Y4 722 aaPredicted RBP19.55■□□□□ 0.72
MATR3-239ENST00000514694 SLX4Q8IY92 1834 aa19.55■□□□□ 0.72
MATR3-239ENST00000514694 GRM8O00222 908 aa19.54■□□□□ 0.72
MATR3-239ENST00000514694 C7orf43Q8WVR3 580 aa19.54■□□□□ 0.72
MATR3-239ENST00000514694 CCDC85AQ96PX6 553 aaPredicted RBP19.54■□□□□ 0.72
MATR3-239ENST00000514694 ABCC4O15439 1325 aa19.53■□□□□ 0.72
MATR3-239ENST00000514694 C21orf2O43822 256 aa19.53■□□□□ 0.72
MATR3-239ENST00000514694 PDE8AO60658 829 aa19.53■□□□□ 0.72
MATR3-239ENST00000514694 NBPF7P0C2Y1 421 aaPredicted RBP19.53■□□□□ 0.72
MATR3-239ENST00000514694 ATF7IPQ6VMQ6 1270 aa19.53■□□□□ 0.72
MATR3-239ENST00000514694 CRAMP1Q96RY5 1269 aa19.53■□□□□ 0.72
MATR3-239ENST00000514694 DCAF8L1A6NGE4 600 aa19.52■□□□□ 0.72
MATR3-239ENST00000514694 GRIN3BO60391 1043 aa19.52■□□□□ 0.72
MATR3-239ENST00000514694 CTSWP56202 376 aa19.52■□□□□ 0.72
MATR3-239ENST00000514694 EPHA10Q5JZY3 1008 aa19.52■□□□□ 0.72
MATR3-239ENST00000514694 CLUAP1Q96AJ1 413 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms