RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 LMOD1P29536 600 aaPredicted RBP15.16■□□□□ 0.02
RNF4-218ENST00000513284 BRPF1P55201 1214 aaPredicted RBP15.16■□□□□ 0.02
RNF4-218ENST00000513284 CIAPIN1Q6FI81 312 aa15.16■□□□□ 0.02
RNF4-218ENST00000513284 NPM2Q86SE8 214 aaKnown RBP15.16■□□□□ 0.02
RNF4-218ENST00000513284 PGAP2Q9UHJ9 254 aa15.16■□□□□ 0.02
RNF4-218ENST00000513284 PDE4DIPQ5VU43 2346 aa15.16■□□□□ 0.02
RNF4-218ENST00000513284 BTBD11A6QL63 1104 aa15.15■□□□□ 0.02
RNF4-218ENST00000513284 CA12O43570 354 aa15.15■□□□□ 0.02
RNF4-218ENST00000513284 CELF2O95319 508 aaKnown RBP15.15■□□□□ 0.02
RNF4-218ENST00000513284 TRIM26Q12899 539 aaPredicted RBP15.15■□□□□ 0.02
RNF4-218ENST00000513284 HHIPL1Q96JK4 782 aa15.15■□□□□ 0.02
RNF4-218ENST00000513284 GLIS2Q9BZE0 524 aaPredicted RBP15.15■□□□□ 0.02
RNF4-218ENST00000513284 HOXA10P31260 410 aaPredicted RBP15.14■□□□□ 0.01
RNF4-218ENST00000513284 HIRAP54198 1017 aaPredicted RBP15.14■□□□□ 0.01
RNF4-218ENST00000513284 CC2D2BQ6DHV5 1058 aa15.14■□□□□ 0.01
RNF4-218ENST00000513284 LARGE2Q8N3Y3 721 aa15.14■□□□□ 0.01
RNF4-218ENST00000513284 PHACTR3Q96KR7 559 aa15.14■□□□□ 0.01
RNF4-218ENST00000513284 GPRC5DQ9NZD1 345 aa15.14■□□□□ 0.01
RNF4-218ENST00000513284 ZNF652Q9Y2D9 606 aa15.14■□□□□ 0.01
RNF4-218ENST00000513284 ABCC12Q96J65 1359 aa15.13■□□□□ 0.01
RNF4-218ENST00000513284 RGL2O15211 777 aa15.13■□□□□ 0.01
RNF4-218ENST00000513284 DLK2Q6UY11 383 aa15.13■□□□□ 0.01
RNF4-218ENST00000513284 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
RNF4-218ENST00000513284 ADARB2Q9NS39 739 aaKnown RBP15.13■□□□□ 0.01
RNF4-218ENST00000513284 SNRPA1P09661 255 aaKnown RBP15.12■□□□□ 0.01
RNF4-218ENST00000513284 CXCL9Q07325 125 aa15.12■□□□□ 0.01
RNF4-218ENST00000513284 GAS2L2Q8NHY3 880 aa15.12■□□□□ 0.01
RNF4-218ENST00000513284 TIMELESSQ9UNS1 1208 aa15.12■□□□□ 0.01
RNF4-218ENST00000513284 PER1O15534 1290 aaPredicted RBP15.11■□□□□ 0.01
RNF4-218ENST00000513284 SOX10P56693 466 aa15.11■□□□□ 0.01
RNF4-218ENST00000513284 EIF4G2P78344 907 aaKnown RBP eCLIP15.11■□□□□ 0.01
RNF4-218ENST00000513284 TCERG1O14776 1098 aaKnown RBP15.1■□□□□ 0.01
RNF4-218ENST00000513284 C3orf67Q6ZVT6 689 aa15.1■□□□□ 0.01
RNF4-218ENST00000513284 COL3A1P02461 1466 aaPredicted RBP15.09■□□□□ 0.01
RNF4-218ENST00000513284 FAM155AB1AL88 458 aaPredicted RBP15.09■□□□□ 0.01
RNF4-218ENST00000513284 GTF2E1P29083 439 aaPredicted RBP15.09■□□□□ 0.01
RNF4-218ENST00000513284 GMPSP49915 693 aaPredicted RBP15.09■□□□□ 0.01
RNF4-218ENST00000513284 AOC3Q16853 763 aa15.09■□□□□ 0.01
RNF4-218ENST00000513284 NIM1KQ8IY84 436 aa15.09■□□□□ 0.01
RNF4-218ENST00000513284 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
RNF4-218ENST00000513284 NPC1L1Q9UHC9 1359 aa15.09■□□□□ 0.01
RNF4-218ENST00000513284 SHTN1A0MZ66 631 aa15.08■□□□□ 0
RNF4-218ENST00000513284 U2SURPO15042 1029 aaKnown RBP15.08■□□□□ 0
RNF4-218ENST00000513284 GRIPAP1Q4V328 841 aa15.08■□□□□ 0
RNF4-218ENST00000513284 KIF7Q2M1P5 1343 aa15.08■□□□□ 0
RNF4-218ENST00000513284 PPIP5K2O43314 1243 aa15.07■□□□□ 0
RNF4-218ENST00000513284 NOGQ13253 232 aa15.07■□□□□ 0
RNF4-218ENST00000513284 SUSD4Q5VX71 490 aa15.07■□□□□ 0
RNF4-218ENST00000513284 TRPM4Q8TD43 1214 aa15.07■□□□□ 0
RNF4-218ENST00000513284 ZC3H15Q8WU90 426 aaKnown RBP15.07■□□□□ 0
RNF4-218ENST00000513284 ZNF408Q9H9D4 720 aa15.07■□□□□ 0
RNF4-218ENST00000513284 ZNRF3Q9ULT6 936 aa15.07■□□□□ 0
RNF4-218ENST00000513284 PPEF1O14829 653 aaPredicted RBP15.06■□□□□ 0
RNF4-218ENST00000513284 PRPF38BQ5VTL8 546 aaKnown RBP15.06■□□□□ 0
RNF4-218ENST00000513284 TTLL7Q6ZT98 887 aa15.06■□□□□ 0
RNF4-218ENST00000513284 CDC37L1Q7L3B6 337 aa15.06■□□□□ 0
RNF4-218ENST00000513284 MCM10Q7L590 875 aa15.06■□□□□ 0
RNF4-218ENST00000513284 USP48Q86UV5 1035 aa15.06■□□□□ 0
RNF4-218ENST00000513284 RPGRQ92834 1020 aaKnown RBP15.06■□□□□ 0
RNF4-218ENST00000513284 RTFDC1Q9BY42 306 aaPredicted RBP15.06■□□□□ 0
RNF4-218ENST00000513284 UBN2Q6ZU65 1347 aa15.06■□□□□ 0
RNF4-218ENST00000513284 ERVV-1B6SEH8 477 aa15.05■□□□□ -0
RNF4-218ENST00000513284 HUNKP57058 714 aa15.05■□□□□ -0
RNF4-218ENST00000513284 DCTN1Q14203 1278 aa15.05■□□□□ -0
RNF4-218ENST00000513284 CC2D1BQ5T0F9 858 aaKnown RBP15.05■□□□□ -0
RNF4-218ENST00000513284 NGEFQ8N5V2 710 aa15.05■□□□□ -0
RNF4-218ENST00000513284 NYXQ9GZU5 481 aa15.05■□□□□ -0
RNF4-218ENST00000513284 RSPH6AQ9H0K4 717 aa15.05■□□□□ -0
RNF4-218ENST00000513284 VPS33BQ9H267 617 aa15.05■□□□□ -0
RNF4-218ENST00000513284 RIC1Q4ADV7 1423 aa15.05■□□□□ -0
RNF4-218ENST00000513284 RAD17O75943 681 aa15.04■□□□□ -0
RNF4-218ENST00000513284 GPTP24298 496 aa15.04■□□□□ -0
RNF4-218ENST00000513284 PRKAR2BP31323 418 aa15.04■□□□□ -0
RNF4-218ENST00000513284 KIF23Q02241 960 aaPredicted RBP15.04■□□□□ -0
RNF4-218ENST00000513284 RBM17Q96I25 401 aaKnown RBP15.04■□□□□ -0
RNF4-218ENST00000513284 RNF186Q9NXI6 227 aa15.04■□□□□ -0
RNF4-218ENST00000513284 MIS18AQ9NYP9 233 aa15.04■□□□□ -0
RNF4-218ENST00000513284 ATP6V0A2Q9Y487 856 aa15.04■□□□□ -0
RNF4-218ENST00000513284 ZNF34Q8IZ26 560 aa15.03■□□□□ -0
RNF4-218ENST00000513284 CNOT7Q9UIV1 285 aaKnown RBP15.03■□□□□ -0
RNF4-218ENST00000513284 NUP98P52948 1817 aa15.03■□□□□ -0
RNF4-218ENST00000513284 MAP3K15Q6ZN16 1313 aa15.02■□□□□ -0
RNF4-218ENST00000513284 CLSPNQ9HAW4 1339 aa15.02■□□□□ -0
RNF4-218ENST00000513284 YDJCA8MPS7 323 aa15.02■□□□□ -0
RNF4-218ENST00000513284 TRPA1O75762 1119 aa15.02■□□□□ -0
RNF4-218ENST00000513284 NTSR2O95665 410 aa15.02■□□□□ -0
RNF4-218ENST00000513284 RGMBQ6NW40 437 aa15.02■□□□□ -0
RNF4-218ENST00000513284 CSRNP1Q96S65 589 aa15.02■□□□□ -0
RNF4-218ENST00000513284 SAGE1Q9NXZ1 904 aa15.02■□□□□ -0
RNF4-218ENST00000513284 EGFRP00533 1210 aa15.01□□□□□ -0.01
RNF4-218ENST00000513284 SLC10A5Q5PT55 438 aa15.01□□□□□ -0.01
RNF4-218ENST00000513284 KIAA2012Q0VF49 1180 aa15□□□□□ -0.01
RNF4-218ENST00000513284 SAMD7Q7Z3H4 446 aa15□□□□□ -0.01
RNF4-218ENST00000513284 BCL2L13Q9BXK5 485 aa15□□□□□ -0.01
RNF4-218ENST00000513284 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
RNF4-218ENST00000513284 IBTKQ9P2D0 1353 aaPredicted RBP14.99□□□□□ -0.01
RNF4-218ENST00000513284 ABCC4O15439 1325 aa14.99□□□□□ -0.01
RNF4-218ENST00000513284 CDHR2Q9BYE9 1310 aa14.99□□□□□ -0.01
RNF4-218ENST00000513284 POLR2AP24928 1970 aaKnown RBP14.99□□□□□ -0.01
RNF4-218ENST00000513284 TAF7Q15545 349 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms