RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 CCDC148Q8NFR7 591 aa18.59■□□□□ 0.57
TRIO-221ENST00000513206 FERMT3Q86UX7 667 aa18.59■□□□□ 0.57
TRIO-221ENST00000513206 GOLGA6L7A0A1B0GV03 622 aa18.58■□□□□ 0.57
TRIO-221ENST00000513206 GSTO1P78417 241 aa18.58■□□□□ 0.57
TRIO-221ENST00000513206 SYCP3Q8IZU3 236 aa18.58■□□□□ 0.57
TRIO-221ENST00000513206 IPO4Q8TEX9 1081 aaKnown RBP18.58■□□□□ 0.57
TRIO-221ENST00000513206 FAM107BQ9H098 131 aa18.58■□□□□ 0.57
TRIO-221ENST00000513206 ERLIN1O75477 346 aa18.58■□□□□ 0.57
TRIO-221ENST00000513206 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.58■□□□□ 0.57
TRIO-221ENST00000513206 INCENPQ9NQS7 918 aa18.58■□□□□ 0.57
TRIO-221ENST00000513206 ZNF608Q9ULD9 1512 aaPredicted RBP18.58■□□□□ 0.57
TRIO-221ENST00000513206 ZGPATQ8N5A5 531 aaKnown RBP18.58■□□□□ 0.56
TRIO-221ENST00000513206 NPHP3Q7Z494 1330 aa18.58■□□□□ 0.56
TRIO-221ENST00000513206 PI4KAP2A4QPH2 592 aa18.58■□□□□ 0.56
TRIO-221ENST00000513206 PI4KAP1Q8N8J0 262 aa18.58■□□□□ 0.56
TRIO-221ENST00000513206 GOLGA8AA7E2F4 631 aa18.58■□□□□ 0.56
TRIO-221ENST00000513206 CCDC184Q52MB2 194 aa18.58■□□□□ 0.56
TRIO-221ENST00000513206 FERMT2Q96AC1 680 aa18.57■□□□□ 0.56
TRIO-221ENST00000513206 TCP11L1Q9NUJ3 509 aa18.57■□□□□ 0.56
TRIO-221ENST00000513206 CNNM3Q8NE01 707 aa18.57■□□□□ 0.56
TRIO-221ENST00000513206 CRNKL1Q9BZJ0 848 aaKnown RBP18.57■□□□□ 0.56
TRIO-221ENST00000513206 PPIP5K1Q6PFW1 1433 aa18.57■□□□□ 0.56
TRIO-221ENST00000513206 PLEKHH1Q9ULM0 1364 aa18.57■□□□□ 0.56
TRIO-221ENST00000513206 CETN1Q12798 172 aa18.56■□□□□ 0.56
TRIO-221ENST00000513206 STX8Q9UNK0 236 aa18.56■□□□□ 0.56
TRIO-221ENST00000513206 ANKRD13DQ6ZTN6 518 aa18.56■□□□□ 0.56
TRIO-221ENST00000513206 SYCE3A1L190 88 aa18.56■□□□□ 0.56
TRIO-221ENST00000513206 WDR7Q9Y4E6 1490 aa18.56■□□□□ 0.56
TRIO-221ENST00000513206 CLEC11AQ9Y240 323 aa18.56■□□□□ 0.56
TRIO-221ENST00000513206 MAP3K1Q13233 1512 aa18.56■□□□□ 0.56
TRIO-221ENST00000513206 TMCO3Q6UWJ1 677 aa18.56■□□□□ 0.56
TRIO-221ENST00000513206 KDM5AP29375 1690 aaKnown RBP18.55■□□□□ 0.56
TRIO-221ENST00000513206 TSPY3P0CV98 308 aa18.55■□□□□ 0.56
TRIO-221ENST00000513206 TSPY8P0CW00 308 aa18.55■□□□□ 0.56
TRIO-221ENST00000513206 CA8P35219 290 aa18.55■□□□□ 0.56
TRIO-221ENST00000513206 UHRF1BP1LA0JNW5 1464 aa18.55■□□□□ 0.56
TRIO-221ENST00000513206 JARID2Q92833 1246 aaPredicted RBP18.55■□□□□ 0.56
TRIO-221ENST00000513206 PRIMPOLQ96LW4 560 aa18.55■□□□□ 0.56
TRIO-221ENST00000513206 AMPD3Q01432 767 aa18.55■□□□□ 0.56
TRIO-221ENST00000513206 ZNF518AQ6AHZ1 1483 aa18.55■□□□□ 0.56
TRIO-221ENST00000513206 MICU3Q86XE3 530 aa18.55■□□□□ 0.56
TRIO-221ENST00000513206 ABCC1P33527 1531 aa18.55■□□□□ 0.56
TRIO-221ENST00000513206 CKAP2LQ8IYA6 745 aa18.54■□□□□ 0.56
TRIO-221ENST00000513206 ASXL2Q76L83 1435 aa18.54■□□□□ 0.56
TRIO-221ENST00000513206 HAND2P61296 217 aa18.54■□□□□ 0.56
TRIO-221ENST00000513206 ANO10Q9NW15 660 aa18.54■□□□□ 0.56
TRIO-221ENST00000513206 TTC21AQ8NDW8 1320 aa18.54■□□□□ 0.56
TRIO-221ENST00000513206 F8W031 263 aaPredicted RBP18.54■□□□□ 0.56
TRIO-221ENST00000513206 SNRKQ9NRH2 765 aa18.54■□□□□ 0.56
TRIO-221ENST00000513206 SCAND2PQ9GZW5 306 aaPredicted RBP18.54■□□□□ 0.56
TRIO-221ENST00000513206 RBM25P49756 843 aaKnown RBP18.54■□□□□ 0.56
TRIO-221ENST00000513206 FAM83GA6ND36 823 aa18.54■□□□□ 0.56
TRIO-221ENST00000513206 CTR9Q6PD62 1173 aa18.54■□□□□ 0.56
TRIO-221ENST00000513206 NYXQ9GZU5 481 aa18.54■□□□□ 0.56
TRIO-221ENST00000513206 NUP88Q99567 741 aaPredicted RBP18.53■□□□□ 0.56
TRIO-221ENST00000513206 VTI1AQ96AJ9 217 aa18.53■□□□□ 0.56
TRIO-221ENST00000513206 HDAC9Q9UKV0 1011 aa18.53■□□□□ 0.56
TRIO-221ENST00000513206 TRIM27P14373 513 aa18.53■□□□□ 0.56
TRIO-221ENST00000513206 METAP2P50579 478 aaKnown RBP eCLIP18.53■□□□□ 0.56
TRIO-221ENST00000513206 CTNNBL1Q8WYA6 563 aaPredicted RBP18.53■□□□□ 0.56
TRIO-221ENST00000513206 NLRP3Q96P20 1036 aa18.53■□□□□ 0.56
TRIO-221ENST00000513206 CHPF2Q9P2E5 772 aa18.53■□□□□ 0.56
TRIO-221ENST00000513206 A2MP01023 1474 aa18.53■□□□□ 0.56
TRIO-221ENST00000513206 PLS1Q14651 629 aa18.53■□□□□ 0.56
TRIO-221ENST00000513206 IFIT1BQ5T764 474 aaKnown RBP18.53■□□□□ 0.56
TRIO-221ENST00000513206 LARP6Q9BRS8 491 aaKnown RBP18.53■□□□□ 0.56
TRIO-221ENST00000513206 DDB1Q16531 1140 aa18.53■□□□□ 0.56
TRIO-221ENST00000513206 CCDC94Q9BW85 323 aaPredicted RBP18.52■□□□□ 0.56
TRIO-221ENST00000513206 LIMCH1Q9UPQ0 1083 aa18.52■□□□□ 0.56
TRIO-221ENST00000513206 KIF20AO95235 890 aa18.52■□□□□ 0.56
TRIO-221ENST00000513206 CCDC183Q5T5S1 534 aa18.52■□□□□ 0.56
TRIO-221ENST00000513206 STXBP4Q6ZWJ1 553 aa18.52■□□□□ 0.56
TRIO-221ENST00000513206 MACROD2A1Z1Q3 448 aa18.52■□□□□ 0.56
TRIO-221ENST00000513206 UBXN4Q92575 508 aa18.52■□□□□ 0.55
TRIO-221ENST00000513206 TNNT1P13805 278 aa18.52■□□□□ 0.55
TRIO-221ENST00000513206 CTNNA2P26232 953 aa18.52■□□□□ 0.55
TRIO-221ENST00000513206 CASQ1P31415 396 aa18.52■□□□□ 0.55
TRIO-221ENST00000513206 CCDC178Q5BJE1 867 aa18.52■□□□□ 0.55
TRIO-221ENST00000513206 CCDC91Q7Z6B0 441 aa18.52■□□□□ 0.55
TRIO-221ENST00000513206 BICD1Q96G01 975 aa18.51■□□□□ 0.55
TRIO-221ENST00000513206 GOPCQ9HD26 462 aa18.51■□□□□ 0.55
TRIO-221ENST00000513206 NIP7Q9Y221 180 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRIO-221ENST00000513206 GTF2F1P35269 517 aaKnown RBP eCLIP18.51■□□□□ 0.553e-6■■■■□ 22.4
TRIO-221ENST00000513206 NCOA7Q8NI08 942 aa18.5■□□□□ 0.55
TRIO-221ENST00000513206 ECHDC1Q9NTX5 307 aa18.5■□□□□ 0.55
TRIO-221ENST00000513206 PUF60Q9UHX1 559 aaKnown RBP18.5■□□□□ 0.55
TRIO-221ENST00000513206 KIF2AO00139 706 aaPredicted RBP18.5■□□□□ 0.55
TRIO-221ENST00000513206 TCERG1LQ5VWI1 586 aa18.5■□□□□ 0.55
TRIO-221ENST00000513206 RPRD2Q5VT52 1461 aaKnown RBP18.5■□□□□ 0.55
TRIO-221ENST00000513206 KIF5CO60282 957 aa18.5■□□□□ 0.55
TRIO-221ENST00000513206 SLC26A6Q9BXS9 759 aa18.5■□□□□ 0.55
TRIO-221ENST00000513206 CTAGE5O15320 804 aa18.5■□□□□ 0.55
TRIO-221ENST00000513206 TOP1P11387 765 aaKnown RBP18.5■□□□□ 0.55
TRIO-221ENST00000513206 SFPQP23246 707 aaKnown RBP eCLIP18.5■□□□□ 0.552e-6■□□□□ 10.2
TRIO-221ENST00000513206 IARSP41252 1262 aaKnown RBP18.5■□□□□ 0.55
TRIO-221ENST00000513206 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
TRIO-221ENST00000513206 RTCBQ9Y3I0 505 aaKnown RBP18.5■□□□□ 0.55
TRIO-221ENST00000513206 CFAP74Q9C0B2 1584 aa18.5■□□□□ 0.55
TRIO-221ENST00000513206 UBA7P41226 1012 aa18.49■□□□□ 0.55
TRIO-221ENST00000513206 GSTTP1A0A1W2PQM5 241 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms