RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-231ENST00000513098 DDX21Q9NR30 783 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBE2D3-231ENST00000513098 RNF123Q5XPI4 1314 aa16.41■□□□□ 0.22
UBE2D3-231ENST00000513098 CACNA1SQ13698 1873 aa16.4■□□□□ 0.22
UBE2D3-231ENST00000513098 SNED1Q8TER0 1413 aa16.4■□□□□ 0.22
UBE2D3-231ENST00000513098 HSP90AB3PQ58FF7 597 aa16.4■□□□□ 0.22
UBE2D3-231ENST00000513098 COPS6Q7L5N1 327 aa16.4■□□□□ 0.22
UBE2D3-231ENST00000513098 L3MBTL3Q96JM7 780 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-231ENST00000513098 UTP14AQ9BVJ6 771 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-231ENST00000513098 FZD9O00144 591 aa16.38■□□□□ 0.21
UBE2D3-231ENST00000513098 DDNO94850 711 aaPredicted RBP16.38■□□□□ 0.21
UBE2D3-231ENST00000513098 ZNF853P0CG23 659 aa16.38■□□□□ 0.21
UBE2D3-231ENST00000513098 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
UBE2D3-231ENST00000513098 OLFM4Q6UX06 510 aa16.38■□□□□ 0.21
UBE2D3-231ENST00000513098 SYNE4Q8N205 404 aa16.38■□□□□ 0.21
UBE2D3-231ENST00000513098 RPGRQ92834 1020 aaKnown RBP16.38■□□□□ 0.21
UBE2D3-231ENST00000513098 RBM17Q96I25 401 aaKnown RBP16.38■□□□□ 0.21
UBE2D3-231ENST00000513098 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
UBE2D3-231ENST00000513098 ANXA1P04083 346 aa16.37■□□□□ 0.21
UBE2D3-231ENST00000513098 XAGE3Q8WTP9 111 aa16.37■□□□□ 0.21
UBE2D3-231ENST00000513098 KLRG1Q96E93 195 aa16.37■□□□□ 0.21
UBE2D3-231ENST00000513098 ZNF277Q9NRM2 450 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-231ENST00000513098 IQCA1LA6NCM1 817 aa16.36■□□□□ 0.21
UBE2D3-231ENST00000513098 IARSP41252 1262 aaKnown RBP16.36■□□□□ 0.21
UBE2D3-231ENST00000513098 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
UBE2D3-231ENST00000513098 NLRP10Q86W26 655 aa16.36■□□□□ 0.21
UBE2D3-231ENST00000513098 JMYQ8N9B5 988 aa16.36■□□□□ 0.21
UBE2D3-231ENST00000513098 DBF4Q9UBU7 674 aaPredicted RBP16.36■□□□□ 0.21
UBE2D3-231ENST00000513098 C3orf67Q6ZVT6 689 aa16.35■□□□□ 0.21
UBE2D3-231ENST00000513098 VPS33BQ9H267 617 aa16.35■□□□□ 0.21
UBE2D3-231ENST00000513098 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
UBE2D3-231ENST00000513098 SCN4AP35499 1836 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 APAF1O14727 1248 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 BBOX1O75936 387 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 AIMP1Q12904 312 aaKnown RBP16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 HDGFL1Q5TGJ6 251 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 ANKRD13DQ6ZTN6 518 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 PLBD2Q8NHP8 589 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 MBIPQ9NS73 344 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 IFT57Q9NWB7 429 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 HYPKQ9NX55 129 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
UBE2D3-231ENST00000513098 HTRA3P83110 453 aa16.33■□□□□ 0.2
UBE2D3-231ENST00000513098 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.2
UBE2D3-231ENST00000513098 DUSP27Q5VZP5 1158 aa16.33■□□□□ 0.2
UBE2D3-231ENST00000513098 JDP2Q8WYK2 163 aa16.33■□□□□ 0.2
UBE2D3-231ENST00000513098 TAF1DQ9H5J8 278 aaPredicted RBP16.33■□□□□ 0.2
UBE2D3-231ENST00000513098 ATP6V0A2Q9Y487 856 aa16.33■□□□□ 0.2
UBE2D3-231ENST00000513098 PPEF1O14829 653 aaPredicted RBP16.32■□□□□ 0.2
UBE2D3-231ENST00000513098 GNAI1P63096 354 aa16.32■□□□□ 0.2
UBE2D3-231ENST00000513098 GPC2Q8N158 579 aa16.32■□□□□ 0.2
UBE2D3-231ENST00000513098 ISCA1Q9BUE6 129 aa16.32■□□□□ 0.2
UBE2D3-231ENST00000513098 SH3TC1Q8TE82 1336 aa16.31■□□□□ 0.2
UBE2D3-231ENST00000513098 ZNF541Q9H0D2 1346 aa16.31■□□□□ 0.2
UBE2D3-231ENST00000513098 ZEB1P37275 1124 aaPredicted RBP16.31■□□□□ 0.2
UBE2D3-231ENST00000513098 LDHDQ86WU2 507 aa16.31■□□□□ 0.2
UBE2D3-231ENST00000513098 SP8Q8IXZ3 490 aa16.31■□□□□ 0.2
UBE2D3-231ENST00000513098 RTFDC1Q9BY42 306 aaPredicted RBP16.31■□□□□ 0.2
UBE2D3-231ENST00000513098 TRMT112Q9UI30 125 aaKnown RBP16.31■□□□□ 0.2
UBE2D3-231ENST00000513098 ANKRD36CQ5JPF3 1778 aa16.31■□□□□ 0.2
UBE2D3-231ENST00000513098 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
UBE2D3-231ENST00000513098 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
UBE2D3-231ENST00000513098 TMX4Q9H1E5 349 aaPredicted RBP16.3■□□□□ 0.2
UBE2D3-231ENST00000513098 HACL1Q9UJ83 578 aa16.3■□□□□ 0.2
UBE2D3-231ENST00000513098 ABCC4O15439 1325 aa16.29■□□□□ 0.2
UBE2D3-231ENST00000513098 POTEIP0CG38 1075 aa16.29■□□□□ 0.2
UBE2D3-231ENST00000513098 POTEJP0CG39 1038 aa16.29■□□□□ 0.2
UBE2D3-231ENST00000513098 HCLS1P14317 486 aaPredicted RBP16.29■□□□□ 0.2
UBE2D3-231ENST00000513098 IFFO2Q5TF58 517 aa16.29■□□□□ 0.2
UBE2D3-231ENST00000513098 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
UBE2D3-231ENST00000513098 PASKQ96RG2 1323 aa16.28■□□□□ 0.2
UBE2D3-231ENST00000513098 ITGBL1O95965 494 aaPredicted RBP16.28■□□□□ 0.2
UBE2D3-231ENST00000513098 SF3B3Q15393 1217 aaKnown RBP16.28■□□□□ 0.2
UBE2D3-231ENST00000513098 CCDC27Q2M243 656 aa16.28■□□□□ 0.2
UBE2D3-231ENST00000513098 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
UBE2D3-231ENST00000513098 CREBZFQ9NS37 354 aa16.28■□□□□ 0.2
UBE2D3-231ENST00000513098 EPHX2P34913 555 aa16.27■□□□□ 0.2
UBE2D3-231ENST00000513098 EIF6P56537 245 aaKnown RBP16.27■□□□□ 0.2
UBE2D3-231ENST00000513098 DDX46Q7L014 1031 aaKnown RBP16.27■□□□□ 0.2
UBE2D3-231ENST00000513098 LARGE2Q8N3Y3 721 aa16.27■□□□□ 0.2
UBE2D3-231ENST00000513098 SUPT20HQ8NEM7 779 aa16.27■□□□□ 0.2
UBE2D3-231ENST00000513098 COL4A5P29400 1685 aa16.27■□□□□ 0.19
UBE2D3-231ENST00000513098 GRAPQ13588 217 aa16.26■□□□□ 0.19
UBE2D3-231ENST00000513098 GRAPLQ8TC17 118 aaPredicted RBP16.26■□□□□ 0.19
UBE2D3-231ENST00000513098 TCERG1O14776 1098 aaKnown RBP16.25■□□□□ 0.19
UBE2D3-231ENST00000513098 SLC51AQ86UW1 340 aa16.25■□□□□ 0.19
UBE2D3-231ENST00000513098 C8orf58Q8NAV2 365 aa16.25■□□□□ 0.19
UBE2D3-231ENST00000513098 FAM89AQ96GI7 184 aa16.25■□□□□ 0.19
UBE2D3-231ENST00000513098 LAMB2P55268 1798 aa16.25■□□□□ 0.19
UBE2D3-231ENST00000513098 ATP5J2-PTCD1G3V325 749 aa16.24■□□□□ 0.19
UBE2D3-231ENST00000513098 CCDC184Q52MB2 194 aa16.24■□□□□ 0.19
UBE2D3-231ENST00000513098 NIM1KQ8IY84 436 aa16.24■□□□□ 0.19
UBE2D3-231ENST00000513098 MPNDQ8N594 471 aa16.24■□□□□ 0.19
UBE2D3-231ENST00000513098 ZNRF3Q9ULT6 936 aa16.24■□□□□ 0.19
UBE2D3-231ENST00000513098 ADAMTSL1Q8N6G6 1762 aa16.23■□□□□ 0.19
UBE2D3-231ENST00000513098 PPIP5K2O43314 1243 aa16.23■□□□□ 0.19
UBE2D3-231ENST00000513098 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
UBE2D3-231ENST00000513098 SCNN1DP51172 638 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms