RNA–Protein interactions for RNA: ENST00000513053.5

FAM200B-219, Transcript of family with sequence similarity 200 member B, human

TSL 3

Gene FAM200B, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-219	ENST00000513053	RNF123	Q5XPI4	1314 aa		28.03	■■■□□ 2.08
FAM200B-219	ENST00000513053	RASSF7	Q02833	373 aa		28.03	■■■□□ 2.08
FAM200B-219	ENST00000513053	TWISTNB	Q3B726	338 aa	Predicted RBP	28.03	■■■□□ 2.08
FAM200B-219	ENST00000513053	SLC10A5	Q5PT55	438 aa		28.03	■■■□□ 2.08
FAM200B-219	ENST00000513053	ZNF219	Q9P2Y4	722 aa	Predicted RBP	28.03	■■■□□ 2.08
FAM200B-219	ENST00000513053	CCER2	I3L3R5	266 aa		28.02	■■■□□ 2.08
FAM200B-219	ENST00000513053	FER1L6	Q2WGJ9	1857 aa		28.02	■■■□□ 2.08
FAM200B-219	ENST00000513053	NFKBIE	O00221	500 aa		28.01	■■■□□ 2.07
FAM200B-219	ENST00000513053	ALDH1B1	P30837	517 aa		28.01	■■■□□ 2.07
FAM200B-219	ENST00000513053	C7orf43	Q8WVR3	580 aa		28.01	■■■□□ 2.07
FAM200B-219	ENST00000513053	ISCA1	Q9BUE6	129 aa		28.01	■■■□□ 2.07
FAM200B-219	ENST00000513053	RNF181	Q9P0P0	153 aa		28.01	■■■□□ 2.07
FAM200B-219	ENST00000513053	CCDC88A	Q3V6T2	1871 aa		28.01	■■■□□ 2.07
FAM200B-219	ENST00000513053	GOLGA2	Q08379	1002 aa		28	■■■□□ 2.07
FAM200B-219	ENST00000513053	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28	■■■□□ 2.07
FAM200B-219	ENST00000513053	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28	■■■□□ 2.07
FAM200B-219	ENST00000513053	LMNB1	P20700	586 aa		27.99	■■■□□ 2.07
FAM200B-219	ENST00000513053	PRELP	P51888	382 aa		27.99	■■■□□ 2.07
FAM200B-219	ENST00000513053	SOGA3	Q5TF21	947 aa		27.99	■■■□□ 2.07
FAM200B-219	ENST00000513053	RIC3	Q7Z5B4	369 aa		27.99	■■■□□ 2.07
FAM200B-219	ENST00000513053	HOXA10	P31260	410 aa	Predicted RBP	27.98	■■■□□ 2.07
FAM200B-219	ENST00000513053	TRIM28	Q13263	835 aa	Known RBP	27.98	■■■□□ 2.07
FAM200B-219	ENST00000513053	ZNF526	Q8TF50	670 aa	Predicted RBP	27.98	■■■□□ 2.07
FAM200B-219	ENST00000513053	NLRP3	Q96P20	1036 aa		27.98	■■■□□ 2.07
FAM200B-219	ENST00000513053	TRMT112	Q9UI30	125 aa	Known RBP	27.98	■■■□□ 2.07
FAM200B-219	ENST00000513053	ZNF521	Q96K83	1311 aa		27.97	■■■□□ 2.07
FAM200B-219	ENST00000513053	ATP5J2-PTCD1	G3V325	749 aa		27.97	■■■□□ 2.07
FAM200B-219	ENST00000513053	C3orf67	Q6ZVT6	689 aa		27.97	■■■□□ 2.07
FAM200B-219	ENST00000513053	STK31	Q9BXU1	1019 aa		27.97	■■■□□ 2.07
FAM200B-219	ENST00000513053	SH3TC1	Q8TE82	1336 aa		27.96	■■■□□ 2.07
FAM200B-219	ENST00000513053	SYNE4	Q8N205	404 aa		27.96	■■■□□ 2.07
FAM200B-219	ENST00000513053	RPGR	Q92834	1020 aa	Known RBP	27.96	■■■□□ 2.07
FAM200B-219	ENST00000513053	LTBP3	Q9NS15	1303 aa		27.95	■■■□□ 2.07
FAM200B-219	ENST00000513053	CACNA1F	O60840	1977 aa		27.95	■■■□□ 2.07
FAM200B-219	ENST00000513053	TCERG1	O14776	1098 aa	Known RBP	27.95	■■■□□ 2.06
FAM200B-219	ENST00000513053	VAMP4	O75379	141 aa		27.95	■■■□□ 2.06
FAM200B-219	ENST00000513053	DDX58	O95786	925 aa	Known RBP	27.95	■■■□□ 2.06
FAM200B-219	ENST00000513053	EXOSC9	Q06265	439 aa	Known RBP	27.95	■■■□□ 2.06
FAM200B-219	ENST00000513053	MYH16	Q9H6N6	1097 aa		27.95	■■■□□ 2.06
FAM200B-219	ENST00000513053	RBM17	Q96I25	401 aa	Known RBP	27.94	■■■□□ 2.06
FAM200B-219	ENST00000513053	CRAMP1	Q96RY5	1269 aa		27.94	■■■□□ 2.06
FAM200B-219	ENST00000513053	HCLS1	P14317	486 aa	Predicted RBP	27.93	■■■□□ 2.06
FAM200B-219	ENST00000513053	CCDC93	Q567U6	631 aa		27.93	■■■□□ 2.06
FAM200B-219	ENST00000513053	TAOK3	Q9H2K8	898 aa		27.93	■■■□□ 2.06
FAM200B-219	ENST00000513053	ZC3H4	Q9UPT8	1303 aa	Known RBP	27.92	■■■□□ 2.06
FAM200B-219	ENST00000513053	SLC4A2	P04920	1241 aa		27.92	■■■□□ 2.06
FAM200B-219	ENST00000513053	ZNF428	Q96B54	188 aa		27.92	■■■□□ 2.06
FAM200B-219	ENST00000513053	DICER1	Q9UPY3	1922 aa	Known RBP	27.92	■■■□□ 2.06
FAM200B-219	ENST00000513053	LAMB2	P55268	1798 aa		27.91	■■■□□ 2.06
FAM200B-219	ENST00000513053	KSR2	Q6VAB6	950 aa		27.91	■■■□□ 2.06
FAM200B-219	ENST00000513053	MYD88	Q99836	296 aa		27.91	■■■□□ 2.06
FAM200B-219	ENST00000513053	METTL22	Q9BUU2	404 aa	Predicted RBP	27.91	■■■□□ 2.06
FAM200B-219	ENST00000513053	OLFM4	Q6UX06	510 aa		27.9	■■■□□ 2.06
FAM200B-219	ENST00000513053	G2E3	Q7L622	706 aa		27.9	■■■□□ 2.06
FAM200B-219	ENST00000513053	FAM89A	Q96GI7	184 aa		27.9	■■■□□ 2.06
FAM200B-219	ENST00000513053	RTKN2	Q8IZC4	609 aa		27.89	■■■□□ 2.06
FAM200B-219	ENST00000513053	MAP3K2	Q9Y2U5	619 aa		27.89	■■■□□ 2.06
FAM200B-219	ENST00000513053	PI4KAP2	A4QPH2	592 aa		27.88	■■■□□ 2.05
FAM200B-219	ENST00000513053	DIEXF	Q68CQ4	756 aa	Known RBP	27.88	■■■□□ 2.05
FAM200B-219	ENST00000513053	DDX60	Q8IY21	1712 aa	Known RBP	27.88	■■■□□ 2.05
FAM200B-219	ENST00000513053	PI4KAP1	Q8N8J0	262 aa		27.88	■■■□□ 2.05
FAM200B-219	ENST00000513053	CCDC191	Q8NCU4	936 aa		27.88	■■■□□ 2.05
FAM200B-219	ENST00000513053	C1QTNF8	P60827	252 aa		27.87	■■■□□ 2.05
FAM200B-219	ENST00000513053	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.87	■■■□□ 2.05
FAM200B-219	ENST00000513053	CC2D2B	Q6DHV5	1058 aa		27.87	■■■□□ 2.05
FAM200B-219	ENST00000513053	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.86	■■■□□ 2.05
FAM200B-219	ENST00000513053	SNED1	Q8TER0	1413 aa		27.85	■■■□□ 2.05
FAM200B-219	ENST00000513053	TIAM2	Q8IVF5	1701 aa		27.85	■■■□□ 2.05
FAM200B-219	ENST00000513053	KIF3C	O14782	793 aa		27.85	■■■□□ 2.05
FAM200B-219	ENST00000513053	FLII	Q13045	1269 aa		27.85	■■■□□ 2.05
FAM200B-219	ENST00000513053	KDM2B	Q8NHM5	1336 aa		27.85	■■■□□ 2.05
FAM200B-219	ENST00000513053	PPEF1	O14829	653 aa	Predicted RBP	27.84	■■■□□ 2.05
FAM200B-219	ENST00000513053	RTL5	Q5HYW3	569 aa	Predicted RBP	27.84	■■■□□ 2.05
FAM200B-219	ENST00000513053	CWC25	Q9NXE8	425 aa	Predicted RBP	27.84	■■■□□ 2.05
FAM200B-219	ENST00000513053	ABCC4	O15439	1325 aa		27.84	■■■□□ 2.05
FAM200B-219	ENST00000513053	IRS4	O14654	1257 aa	Predicted RBP	27.83	■■■□□ 2.05
FAM200B-219	ENST00000513053	SF3B3	Q15393	1217 aa	Known RBP	27.83	■■■□□ 2.05
FAM200B-219	ENST00000513053	GRIPAP1	Q4V328	841 aa		27.83	■■■□□ 2.05
FAM200B-219	ENST00000513053	DDX46	Q7L014	1031 aa	Known RBP	27.83	■■■□□ 2.05
FAM200B-219	ENST00000513053	NMRK2	Q9NPI5	230 aa		27.83	■■■□□ 2.05
FAM200B-219	ENST00000513053		E9PSI1	815 aa		27.82	■■■□□ 2.04
FAM200B-219	ENST00000513053	BBOX1	O75936	387 aa		27.82	■■■□□ 2.04
FAM200B-219	ENST00000513053	PCCA	P05165	728 aa	Predicted RBP	27.82	■■■□□ 2.04
FAM200B-219	ENST00000513053	IGKV5-2	P06315	115 aa		27.82	■■■□□ 2.04
FAM200B-219	ENST00000513053	PSMD1	Q99460	953 aa		27.82	■■■□□ 2.04
FAM200B-219	ENST00000513053	TAF1	P21675	1872 aa		27.81	■■■□□ 2.04
FAM200B-219	ENST00000513053	GLTPD2	A6NH11	291 aa		27.81	■■■□□ 2.04
FAM200B-219	ENST00000513053	NEXN	Q0ZGT2	675 aa		27.81	■■■□□ 2.04
FAM200B-219	ENST00000513053	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.81	■■■□□ 2.04
FAM200B-219	ENST00000513053	ATP6V0A2	Q9Y487	856 aa		27.81	■■■□□ 2.04
FAM200B-219	ENST00000513053	HSP90B1	P14625	803 aa	Known RBP	27.8	■■■□□ 2.04
FAM200B-219	ENST00000513053	FKBP5	Q13451	457 aa	Predicted RBP	27.8	■■■□□ 2.04
FAM200B-219	ENST00000513053	MIER1	Q8N108	512 aa		27.8	■■■□□ 2.04
FAM200B-219	ENST00000513053	SLFN5	Q08AF3	891 aa		27.79	■■■□□ 2.04
FAM200B-219	ENST00000513053	GRAP	Q13588	217 aa		27.79	■■■□□ 2.04
FAM200B-219	ENST00000513053	SLC51A	Q86UW1	340 aa		27.79	■■■□□ 2.04
FAM200B-219	ENST00000513053	GRAPL	Q8TC17	118 aa	Predicted RBP	27.79	■■■□□ 2.04
FAM200B-219	ENST00000513053	NEURL1B	A8MQ27	555 aa		27.77	■■■□□ 2.04
FAM200B-219	ENST00000513053	IARS	P41252	1262 aa	Known RBP	27.77	■■■□□ 2.04
FAM200B-219	ENST00000513053	DPY19L2	Q6NUT2	758 aa		27.77	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms