RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
VEGFA-216ENST00000512683 FER1L6Q2WGJ9 1857 aa16.5■□□□□ 0.23
VEGFA-216ENST00000512683 BBOX1O75936 387 aa16.5■□□□□ 0.23
VEGFA-216ENST00000512683 RIPK4P57078 832 aa16.5■□□□□ 0.23
VEGFA-216ENST00000512683 DDX10Q13206 875 aaKnown RBP16.5■□□□□ 0.23
VEGFA-216ENST00000512683 ZBTB3Q9H5J0 574 aa16.5■□□□□ 0.23
VEGFA-216ENST00000512683 CLEC11AQ9Y240 323 aa16.5■□□□□ 0.23
VEGFA-216ENST00000512683 ZNF541Q9H0D2 1346 aa16.49■□□□□ 0.23
VEGFA-216ENST00000512683 NTSR2O95665 410 aa16.49■□□□□ 0.23
VEGFA-216ENST00000512683 EAPPQ56P03 285 aaPredicted RBP16.49■□□□□ 0.23
VEGFA-216ENST00000512683 CNTROBQ8N137 903 aa16.49■□□□□ 0.23
VEGFA-216ENST00000512683 THUMPD2Q9BTF0 503 aaKnown RBP16.49■□□□□ 0.23
VEGFA-216ENST00000512683 UTP14AQ9BVJ6 771 aaKnown RBP16.49■□□□□ 0.23
VEGFA-216ENST00000512683 SLX4Q8IY92 1834 aa16.49■□□□□ 0.23
VEGFA-216ENST00000512683 CNTNAP1P78357 1384 aa16.49■□□□□ 0.23
VEGFA-216ENST00000512683 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
VEGFA-216ENST00000512683 GPTP24298 496 aa16.48■□□□□ 0.23
VEGFA-216ENST00000512683 LMOD1P29536 600 aaPredicted RBP16.48■□□□□ 0.23
VEGFA-216ENST00000512683 PDIA6Q15084 440 aa16.48■□□□□ 0.23
VEGFA-216ENST00000512683 OLFM4Q6UX06 510 aa16.48■□□□□ 0.23
VEGFA-216ENST00000512683 LRP10Q7Z4F1 713 aa16.48■□□□□ 0.23
VEGFA-216ENST00000512683 SUPT20HQ8NEM7 779 aa16.48■□□□□ 0.23
VEGFA-216ENST00000512683 MKRN1Q9UHC7 482 aaKnown RBP16.48■□□□□ 0.23
VEGFA-216ENST00000512683 KDM3BQ7LBC6 1761 aa16.48■□□□□ 0.23
VEGFA-216ENST00000512683 SNED1Q8TER0 1413 aa16.47■□□□□ 0.23
VEGFA-216ENST00000512683 BCORQ6W2J9 1755 aa16.47■□□□□ 0.23
VEGFA-216ENST00000512683 TMPOP42166 694 aaKnown RBP16.47■□□□□ 0.23
VEGFA-216ENST00000512683 LARGE2Q8N3Y3 721 aa16.47■□□□□ 0.23
VEGFA-216ENST00000512683 PRDM10Q9NQV6 1147 aa16.47■□□□□ 0.23
VEGFA-216ENST00000512683 ATP6V0A2Q9Y487 856 aa16.47■□□□□ 0.23
VEGFA-216ENST00000512683 ABCC12Q96J65 1359 aa16.47■□□□□ 0.23
VEGFA-216ENST00000512683 COL11A2P13942 1736 aaPredicted RBP16.47■□□□□ 0.23
VEGFA-216ENST00000512683 PPEF1O14829 653 aaPredicted RBP16.46■□□□□ 0.23
VEGFA-216ENST00000512683 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
VEGFA-216ENST00000512683 USP50Q70EL3 339 aaPredicted RBP16.46■□□□□ 0.23
VEGFA-216ENST00000512683 TIAM2Q8IVF5 1701 aa16.45■□□□□ 0.22
VEGFA-216ENST00000512683 RASSF10A6NK89 507 aa16.45■□□□□ 0.22
VEGFA-216ENST00000512683 CHL1O00533 1208 aa16.45■□□□□ 0.22
VEGFA-216ENST00000512683 DEFB115Q30KQ5 88 aa16.45■□□□□ 0.22
VEGFA-216ENST00000512683 TMC4Q7Z404 712 aa16.45■□□□□ 0.22
VEGFA-216ENST00000512683 SP8Q8IXZ3 490 aa16.45■□□□□ 0.22
VEGFA-216ENST00000512683 RTFDC1Q9BY42 306 aaPredicted RBP16.45■□□□□ 0.22
VEGFA-216ENST00000512683 HOXB7P09629 217 aa16.44■□□□□ 0.22
VEGFA-216ENST00000512683 TCIRG1Q13488 830 aa16.44■□□□□ 0.22
VEGFA-216ENST00000512683 NIM1KQ8IY84 436 aa16.44■□□□□ 0.22
VEGFA-216ENST00000512683 AIDAQ96BJ3 306 aa16.44■□□□□ 0.22
VEGFA-216ENST00000512683 DDX21Q9NR30 783 aaKnown RBP eCLIP16.44■□□□□ 0.22
VEGFA-216ENST00000512683 DICER1Q9UPY3 1922 aaKnown RBP16.44■□□□□ 0.22
VEGFA-216ENST00000512683 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
VEGFA-216ENST00000512683 CTCFP49711 727 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-216ENST00000512683 VEGFBP49765 207 aa16.43■□□□□ 0.22
VEGFA-216ENST00000512683 COPS6Q7L5N1 327 aa16.43■□□□□ 0.22
VEGFA-216ENST00000512683 ZNRF3Q9ULT6 936 aa16.43■□□□□ 0.22
VEGFA-216ENST00000512683 GJA3Q9Y6H8 435 aa16.43■□□□□ 0.22
VEGFA-216ENST00000512683 PCNTO95613 3336 aa16.42■□□□□ 0.22
VEGFA-216ENST00000512683 ARFGEF2Q9Y6D5 1785 aa16.42■□□□□ 0.22
VEGFA-216ENST00000512683 MAP2K1Q02750 393 aaPredicted RBP16.42■□□□□ 0.22
VEGFA-216ENST00000512683 MAP1SQ66K74 1059 aaPredicted RBP16.42■□□□□ 0.22
VEGFA-216ENST00000512683 DDX46Q7L014 1031 aaKnown RBP16.42■□□□□ 0.22
VEGFA-216ENST00000512683 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
VEGFA-216ENST00000512683 WBP1LQ9NX94 342 aa16.42■□□□□ 0.22
VEGFA-216ENST00000512683 SCN4AP35499 1836 aa16.41■□□□□ 0.22
VEGFA-216ENST00000512683 PPIP5K2O43314 1243 aa16.41■□□□□ 0.22
VEGFA-216ENST00000512683 SCNN1DP51172 638 aa16.41■□□□□ 0.22
VEGFA-216ENST00000512683 MPNDQ8N594 471 aa16.41■□□□□ 0.22
VEGFA-216ENST00000512683 RUNDC1Q96C34 613 aa16.41■□□□□ 0.22
VEGFA-216ENST00000512683 ADARB2Q9NS39 739 aaKnown RBP16.41■□□□□ 0.22
VEGFA-216ENST00000512683 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
VEGFA-216ENST00000512683 TNIP1Q15025 636 aa16.4■□□□□ 0.22
VEGFA-216ENST00000512683 DPP8Q6V1X1 898 aaPredicted RBP16.4■□□□□ 0.22
VEGFA-216ENST00000512683 C3orf67Q6ZVT6 689 aa16.4■□□□□ 0.22
VEGFA-216ENST00000512683 XAGE3Q8WTP9 111 aa16.4■□□□□ 0.22
VEGFA-216ENST00000512683 ZC3H15Q8WU90 426 aaKnown RBP16.4■□□□□ 0.22
VEGFA-216ENST00000512683 TRMT112Q9UI30 125 aaKnown RBP16.4■□□□□ 0.22
VEGFA-216ENST00000512683 SH3TC1Q8TE82 1336 aa16.4■□□□□ 0.22
VEGFA-216ENST00000512683 CDHR2Q9BYE9 1310 aa16.4■□□□□ 0.22
VEGFA-216ENST00000512683 CCDC88AQ3V6T2 1871 aa16.39■□□□□ 0.22
VEGFA-216ENST00000512683 EPS15P42566 896 aa16.39■□□□□ 0.21
VEGFA-216ENST00000512683 ECE1P42892 770 aa16.39■□□□□ 0.21
VEGFA-216ENST00000512683 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
VEGFA-216ENST00000512683 TRIM28Q13263 835 aaKnown RBP16.39■□□□□ 0.21
VEGFA-216ENST00000512683 GRAPQ13588 217 aa16.39■□□□□ 0.21
VEGFA-216ENST00000512683 PROSER3Q2NL68 480 aa16.39■□□□□ 0.21
VEGFA-216ENST00000512683 PLBD2Q8NHP8 589 aa16.39■□□□□ 0.21
VEGFA-216ENST00000512683 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
VEGFA-216ENST00000512683 CHMP4AQ9BY43 222 aa16.39■□□□□ 0.21
VEGFA-216ENST00000512683 GPRC5DQ9NZD1 345 aa16.39■□□□□ 0.21
VEGFA-216ENST00000512683 ABCC4O15439 1325 aa16.39■□□□□ 0.21
VEGFA-216ENST00000512683 FOXN1O15353 648 aa16.38■□□□□ 0.21
VEGFA-216ENST00000512683 HSP90B1P14625 803 aaKnown RBP16.38■□□□□ 0.21
VEGFA-216ENST00000512683 CXCL9Q07325 125 aa16.38■□□□□ 0.21
VEGFA-216ENST00000512683 AIMP1Q12904 312 aaKnown RBP16.38■□□□□ 0.21
VEGFA-216ENST00000512683 ANKRD13DQ6ZTN6 518 aa16.38■□□□□ 0.21
VEGFA-216ENST00000512683 DBF4Q9UBU7 674 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-216ENST00000512683 PGAP2Q9UHJ9 254 aa16.38■□□□□ 0.21
VEGFA-216ENST00000512683 ABT1Q9ULW3 272 aaKnown RBP16.38■□□□□ 0.21
VEGFA-216ENST00000512683 TCERG1O14776 1098 aaKnown RBP16.37■□□□□ 0.21
VEGFA-216ENST00000512683 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.213e-18■□□□□ 10
VEGFA-216ENST00000512683 AOC3Q16853 763 aa16.37■□□□□ 0.21
VEGFA-216ENST00000512683 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms