RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 ARFGEF2Q9Y6D5 1785 aa20.44■□□□□ 0.86
DDX41-214ENST00000512334 ATP5J2-PTCD1G3V325 749 aa20.43■□□□□ 0.86
DDX41-214ENST00000512334 ZNF219Q9P2Y4 722 aaPredicted RBP20.43■□□□□ 0.86
DDX41-214ENST00000512334 TRMT112Q9UI30 125 aaKnown RBP20.43■□□□□ 0.86
DDX41-214ENST00000512334 TNRC6CQ9HCJ0 1690 aaKnown RBP20.42■□□□□ 0.86
DDX41-214ENST00000512334 CACNA1SQ13698 1873 aa20.42■□□□□ 0.86
DDX41-214ENST00000512334 VAMP4O75379 141 aa20.42■□□□□ 0.86
DDX41-214ENST00000512334 SLC4A2P04920 1241 aa20.42■□□□□ 0.86
DDX41-214ENST00000512334 NPR1P16066 1061 aa20.42■□□□□ 0.86
DDX41-214ENST00000512334 KLRG2A4D1S0 409 aaPredicted RBP20.41■□□□□ 0.86
DDX41-214ENST00000512334 PRPF40BQ6NWY9 871 aaKnown RBP20.41■□□□□ 0.86
DDX41-214ENST00000512334 MYD88Q99836 296 aa20.41■□□□□ 0.86
DDX41-214ENST00000512334 E9PSI1 815 aa20.4■□□□□ 0.86
DDX41-214ENST00000512334 C21orf2O43822 256 aa20.4■□□□□ 0.86
DDX41-214ENST00000512334 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
DDX41-214ENST00000512334 ISCA1Q9BUE6 129 aa20.4■□□□□ 0.86
DDX41-214ENST00000512334 RIC1Q4ADV7 1423 aa20.39■□□□□ 0.85
DDX41-214ENST00000512334 SH3TC1Q8TE82 1336 aa20.39■□□□□ 0.85
DDX41-214ENST00000512334 G2E3Q7L622 706 aa20.39■□□□□ 0.85
DDX41-214ENST00000512334 ZNF784Q8NCA9 323 aaPredicted RBP20.39■□□□□ 0.85
DDX41-214ENST00000512334 RPGRQ92834 1020 aaKnown RBP20.39■□□□□ 0.85
DDX41-214ENST00000512334 NLRP3Q96P20 1036 aa20.39■□□□□ 0.85
DDX41-214ENST00000512334 MAP3K2Q9Y2U5 619 aa20.39■□□□□ 0.85
DDX41-214ENST00000512334 PI4KAP2A4QPH2 592 aa20.38■□□□□ 0.85
DDX41-214ENST00000512334 KSR2Q6VAB6 950 aa20.38■□□□□ 0.85
DDX41-214ENST00000512334 PI4KAP1Q8N8J0 262 aa20.38■□□□□ 0.85
DDX41-214ENST00000512334 SLX4Q8IY92 1834 aa20.38■□□□□ 0.85
DDX41-214ENST00000512334 HCLS1P14317 486 aaPredicted RBP20.37■□□□□ 0.85
DDX41-214ENST00000512334 ALDH1B1P30837 517 aa20.37■□□□□ 0.85
DDX41-214ENST00000512334 RASSF7Q02833 373 aa20.37■□□□□ 0.85
DDX41-214ENST00000512334 SLFN5Q08AF3 891 aa20.37■□□□□ 0.85
DDX41-214ENST00000512334 FLIIQ13045 1269 aa20.37■□□□□ 0.85
DDX41-214ENST00000512334 CRY2Q49AN0 593 aa20.37■□□□□ 0.85
DDX41-214ENST00000512334 SYNE4Q8N205 404 aa20.37■□□□□ 0.85
DDX41-214ENST00000512334 METTL22Q9BUU2 404 aaPredicted RBP20.37■□□□□ 0.85
DDX41-214ENST00000512334 FKBP5Q13451 457 aaPredicted RBP20.36■□□□□ 0.85
DDX41-214ENST00000512334 RTL5Q5HYW3 569 aaPredicted RBP20.36■□□□□ 0.85
DDX41-214ENST00000512334 SLC10A5Q5PT55 438 aa20.36■□□□□ 0.85
DDX41-214ENST00000512334 C3orf67Q6ZVT6 689 aa20.36■□□□□ 0.85
DDX41-214ENST00000512334 FAM89AQ96GI7 184 aa20.36■□□□□ 0.85
DDX41-214ENST00000512334 CDCA7LQ96GN5 454 aa20.36■□□□□ 0.85
DDX41-214ENST00000512334 TRIM28Q13263 835 aaKnown RBP20.35■□□□□ 0.85
DDX41-214ENST00000512334 C9orf131Q5VYM1 1079 aa20.35■□□□□ 0.85
DDX41-214ENST00000512334 RBM17Q96I25 401 aaKnown RBP20.35■□□□□ 0.85
DDX41-214ENST00000512334 CACNA1FO60840 1977 aa20.35■□□□□ 0.85
DDX41-214ENST00000512334 ADCY9O60503 1353 aa20.34■□□□□ 0.85
DDX41-214ENST00000512334 NEXNQ0ZGT2 675 aa20.34■□□□□ 0.85
DDX41-214ENST00000512334 SOGA3Q5TF21 947 aa20.34■□□□□ 0.85
DDX41-214ENST00000512334 RNF181Q9P0P0 153 aa20.34■□□□□ 0.85
DDX41-214ENST00000512334 CCDC191Q8NCU4 936 aa20.33■□□□□ 0.85
DDX41-214ENST00000512334 CWC25Q9NXE8 425 aaPredicted RBP20.33■□□□□ 0.85
DDX41-214ENST00000512334 HOXA10P31260 410 aaPredicted RBP20.32■□□□□ 0.84
DDX41-214ENST00000512334 CCDC93Q567U6 631 aa20.32■□□□□ 0.84
DDX41-214ENST00000512334 ZBTB38Q8NAP3 1195 aaPredicted RBP20.32■□□□□ 0.84
DDX41-214ENST00000512334 ZNF526Q8TF50 670 aaPredicted RBP20.32■□□□□ 0.84
DDX41-214ENST00000512334 LAMB2P55268 1798 aa20.31■□□□□ 0.84
DDX41-214ENST00000512334 NFKBIEO00221 500 aa20.31■□□□□ 0.84
DDX41-214ENST00000512334 LMNB1P20700 586 aa20.31■□□□□ 0.84
DDX41-214ENST00000512334 CRAMP1Q96RY5 1269 aa20.31■□□□□ 0.84
DDX41-214ENST00000512334 TAOK3Q9H2K8 898 aa20.31■□□□□ 0.84
DDX41-214ENST00000512334 SBF1O95248 1867 aa20.3■□□□□ 0.84
DDX41-214ENST00000512334 DDX60Q8IY21 1712 aaKnown RBP20.3■□□□□ 0.84
DDX41-214ENST00000512334 IRS4O14654 1257 aaPredicted RBP20.3■□□□□ 0.84
DDX41-214ENST00000512334 HNRNPUQ00839 825 aaKnown RBP eCLIP20.3■□□□□ 0.84
DDX41-214ENST00000512334 CWF19L2Q2TBE0 894 aaKnown RBP20.3■□□□□ 0.84
DDX41-214ENST00000512334 OLFM4Q6UX06 510 aa20.3■□□□□ 0.84
DDX41-214ENST00000512334 C7orf43Q8WVR3 580 aa20.3■□□□□ 0.84
DDX41-214ENST00000512334 DNAAF4Q8WXU2 420 aa20.3■□□□□ 0.84
DDX41-214ENST00000512334 FER1L6Q2WGJ9 1857 aa20.3■□□□□ 0.84
DDX41-214ENST00000512334 PPEF1O14829 653 aaPredicted RBP20.29■□□□□ 0.84
DDX41-214ENST00000512334 PCCAP05165 728 aaPredicted RBP20.29■□□□□ 0.84
DDX41-214ENST00000512334 IGKV5-2P06315 115 aa20.29■□□□□ 0.84
DDX41-214ENST00000512334 DDX46Q7L014 1031 aaKnown RBP20.29■□□□□ 0.84
DDX41-214ENST00000512334 JARID2Q92833 1246 aaPredicted RBP20.29■□□□□ 0.84
DDX41-214ENST00000512334 ABCC4O15439 1325 aa20.28■□□□□ 0.84
DDX41-214ENST00000512334 HSP90B1P14625 803 aaKnown RBP20.28■□□□□ 0.84
DDX41-214ENST00000512334 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
DDX41-214ENST00000512334 NEURL1BA8MQ27 555 aa20.27■□□□□ 0.84
DDX41-214ENST00000512334 PRELPP51888 382 aa20.27■□□□□ 0.84
DDX41-214ENST00000512334 TRMT2AQ8IZ69 625 aaKnown RBP20.27■□□□□ 0.84
DDX41-214ENST00000512334 RTKN2Q8IZC4 609 aa20.27■□□□□ 0.84
DDX41-214ENST00000512334 TMX4Q9H1E5 349 aaPredicted RBP20.27■□□□□ 0.84
DDX41-214ENST00000512334 GPBP1L1Q9HC44 474 aaPredicted RBP20.27■□□□□ 0.84
DDX41-214ENST00000512334 F6X3S4 739 aa20.26■□□□□ 0.83
DDX41-214ENST00000512334 LTBP3Q9NS15 1303 aa20.26■□□□□ 0.83
DDX41-214ENST00000512334 FKBP4Q02790 459 aaKnown RBP eCLIP20.25■□□□□ 0.83
DDX41-214ENST00000512334 SF3B3Q15393 1217 aaKnown RBP20.25■□□□□ 0.83
DDX41-214ENST00000512334 CC2D2BQ6DHV5 1058 aa20.25■□□□□ 0.83
DDX41-214ENST00000512334 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
DDX41-214ENST00000512334 GRAPQ13588 217 aa20.24■□□□□ 0.83
DDX41-214ENST00000512334 MRPL50Q8N5N7 158 aaKnown RBP20.24■□□□□ 0.83
DDX41-214ENST00000512334 LINS1Q8NG48 757 aa20.24■□□□□ 0.83
DDX41-214ENST00000512334 GRAPLQ8TC17 118 aaPredicted RBP20.24■□□□□ 0.83
DDX41-214ENST00000512334 SSH1Q8WYL5 1049 aa20.24■□□□□ 0.83
DDX41-214ENST00000512334 PDE8AO60658 829 aa20.23■□□□□ 0.83
DDX41-214ENST00000512334 BBOX1O75936 387 aa20.23■□□□□ 0.83
DDX41-214ENST00000512334 GCKRQ14397 625 aa20.23■□□□□ 0.83
DDX41-214ENST00000512334 SLC4A10Q6U841 1118 aa20.23■□□□□ 0.83
DDX41-214ENST00000512334 UBE3BQ7Z3V4 1068 aa20.23■□□□□ 0.83
DDX41-214ENST00000512334 SLC51AQ86UW1 340 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms