RNA–Protein interactions for RNA: ENST00000511288.1

ACSF2-220, Transcript of acyl-CoA synthetase family member 2, humanhuman

TSL 1 (best)

Gene ACSF2, Length 838 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF2-220ENST00000511288 C7orf43Q8WVR3 580 aa18.05■□□□□ 0.48
ACSF2-220ENST00000511288 RNF181Q9P0P0 153 aa18.05■□□□□ 0.48
ACSF2-220ENST00000511288 ZNF219Q9P2Y4 722 aaPredicted RBP18.05■□□□□ 0.48
ACSF2-220ENST00000511288 WDR63Q8IWG1 891 aa18.04■□□□□ 0.48
ACSF2-220ENST00000511288 UTP14AQ9BVJ6 771 aaKnown RBP18.04■□□□□ 0.48
ACSF2-220ENST00000511288 RNF123Q5XPI4 1314 aa18.03■□□□□ 0.48
ACSF2-220ENST00000511288 SLC10A5Q5PT55 438 aa18.03■□□□□ 0.48
ACSF2-220ENST00000511288 PHAXQ9H814 394 aaKnown RBP18.03■□□□□ 0.48
ACSF2-220ENST00000511288 SALL2Q9Y467 1007 aaPredicted RBP18.03■□□□□ 0.48
ACSF2-220ENST00000511288 LAMB2P55268 1798 aa18.03■□□□□ 0.48
ACSF2-220ENST00000511288 DICER1Q9UPY3 1922 aaKnown RBP18.03■□□□□ 0.48
ACSF2-220ENST00000511288 TIAM2Q8IVF5 1701 aa18.03■□□□□ 0.48
ACSF2-220ENST00000511288 LTBP3Q9NS15 1303 aa18.02■□□□□ 0.48
ACSF2-220ENST00000511288 LMNB1P20700 586 aa18.02■□□□□ 0.48
ACSF2-220ENST00000511288 ALDH1B1P30837 517 aa18.02■□□□□ 0.48
ACSF2-220ENST00000511288 CCDC30Q5VVM6 783 aa18.02■□□□□ 0.48
ACSF2-220ENST00000511288 ISCA1Q9BUE6 129 aa18.02■□□□□ 0.48
ACSF2-220ENST00000511288 HOXA10P31260 410 aaPredicted RBP18.01■□□□□ 0.47
ACSF2-220ENST00000511288 C1QTNF8P60827 252 aa18.01■□□□□ 0.47
ACSF2-220ENST00000511288 SOGA3Q5TF21 947 aa18.01■□□□□ 0.47
ACSF2-220ENST00000511288 C3orf67Q6ZVT6 689 aa18.01■□□□□ 0.47
ACSF2-220ENST00000511288 CHMP4AQ9BY43 222 aa18.01■□□□□ 0.47
ACSF2-220ENST00000511288 FANCIQ9NVI1 1328 aa18■□□□□ 0.47
ACSF2-220ENST00000511288 ZC3H4Q9UPT8 1303 aaKnown RBP18■□□□□ 0.47
ACSF2-220ENST00000511288 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
ACSF2-220ENST00000511288 DDX60Q8IY21 1712 aaKnown RBP18■□□□□ 0.47
ACSF2-220ENST00000511288 KIF3CO14782 793 aa17.99■□□□□ 0.47
ACSF2-220ENST00000511288 CCDC93Q567U6 631 aa17.99■□□□□ 0.47
ACSF2-220ENST00000511288 SYNE4Q8N205 404 aa17.99■□□□□ 0.47
ACSF2-220ENST00000511288 RPGRQ92834 1020 aaKnown RBP17.99■□□□□ 0.47
ACSF2-220ENST00000511288 NLRP3Q96P20 1036 aa17.99■□□□□ 0.47
ACSF2-220ENST00000511288 TAOK3Q9H2K8 898 aa17.99■□□□□ 0.47
ACSF2-220ENST00000511288 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
ACSF2-220ENST00000511288 TRMT112Q9UI30 125 aaKnown RBP17.99■□□□□ 0.47
ACSF2-220ENST00000511288 SNED1Q8TER0 1413 aa17.98■□□□□ 0.47
ACSF2-220ENST00000511288 ATP5J2-PTCD1G3V325 749 aa17.98■□□□□ 0.47
ACSF2-220ENST00000511288 GOLGA2Q08379 1002 aa17.98■□□□□ 0.47
ACSF2-220ENST00000511288 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
ACSF2-220ENST00000511288 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
ACSF2-220ENST00000511288 CRAMP1Q96RY5 1269 aa17.98■□□□□ 0.47
ACSF2-220ENST00000511288 SH3TC1Q8TE82 1336 aa17.98■□□□□ 0.47
ACSF2-220ENST00000511288 OLFM4Q6UX06 510 aa17.97■□□□□ 0.47
ACSF2-220ENST00000511288 RBM17Q96I25 401 aaKnown RBP17.97■□□□□ 0.47
ACSF2-220ENST00000511288 HCLS1P14317 486 aaPredicted RBP17.96■□□□□ 0.47
ACSF2-220ENST00000511288 NMRK2Q9NPI5 230 aa17.96■□□□□ 0.47
ACSF2-220ENST00000511288 ZNF521Q96K83 1311 aa17.96■□□□□ 0.46
ACSF2-220ENST00000511288 CACNA1FO60840 1977 aa17.95■□□□□ 0.46
ACSF2-220ENST00000511288 TCERG1O14776 1098 aaKnown RBP17.95■□□□□ 0.46
ACSF2-220ENST00000511288 VAMP4O75379 141 aa17.95■□□□□ 0.46
ACSF2-220ENST00000511288 ZNF428Q96B54 188 aa17.95■□□□□ 0.46
ACSF2-220ENST00000511288 STK31Q9BXU1 1019 aa17.95■□□□□ 0.46
ACSF2-220ENST00000511288 KDM2BQ8NHM5 1336 aa17.95■□□□□ 0.46
ACSF2-220ENST00000511288 CCER2I3L3R5 266 aa17.94■□□□□ 0.46
ACSF2-220ENST00000511288 DDX58O95786 925 aaKnown RBP17.94■□□□□ 0.46
ACSF2-220ENST00000511288 FKBP4Q02790 459 aaKnown RBP eCLIP17.94■□□□□ 0.464e-7■■■■■ 31.2
ACSF2-220ENST00000511288 EXOSC9Q06265 439 aaKnown RBP17.94■□□□□ 0.46
ACSF2-220ENST00000511288 RTKN2Q8IZC4 609 aa17.94■□□□□ 0.46
ACSF2-220ENST00000511288 METTL22Q9BUU2 404 aaPredicted RBP17.94■□□□□ 0.46
ACSF2-220ENST00000511288 GLTPD2A6NH11 291 aa17.93■□□□□ 0.46
ACSF2-220ENST00000511288 CC2D2BQ6DHV5 1058 aa17.93■□□□□ 0.46
ACSF2-220ENST00000511288 KSR2Q6VAB6 950 aa17.93■□□□□ 0.46
ACSF2-220ENST00000511288 G2E3Q7L622 706 aa17.93■□□□□ 0.46
ACSF2-220ENST00000511288 FAM89AQ96GI7 184 aa17.93■□□□□ 0.46
ACSF2-220ENST00000511288 MYD88Q99836 296 aa17.93■□□□□ 0.46
ACSF2-220ENST00000511288 ABCC4O15439 1325 aa17.93■□□□□ 0.46
ACSF2-220ENST00000511288 TAF1P21675 1872 aa17.92■□□□□ 0.46
ACSF2-220ENST00000511288 PPEF1O14829 653 aaPredicted RBP17.92■□□□□ 0.46
ACSF2-220ENST00000511288 SLC4A2P04920 1241 aa17.92■□□□□ 0.46
ACSF2-220ENST00000511288 SLC51AQ86UW1 340 aa17.92■□□□□ 0.46
ACSF2-220ENST00000511288 MYH16Q9H6N6 1097 aa17.92■□□□□ 0.46
ACSF2-220ENST00000511288 MAP3K2Q9Y2U5 619 aa17.92■□□□□ 0.46
ACSF2-220ENST00000511288 PI4KAP2A4QPH2 592 aa17.91■□□□□ 0.46
ACSF2-220ENST00000511288 PI4KAP1Q8N8J0 262 aa17.91■□□□□ 0.46
ACSF2-220ENST00000511288 ZBTB38Q8NAP3 1195 aaPredicted RBP17.91■□□□□ 0.46
ACSF2-220ENST00000511288 CCDC191Q8NCU4 936 aa17.91■□□□□ 0.46
ACSF2-220ENST00000511288 PSMD1Q99460 953 aa17.91■□□□□ 0.46
ACSF2-220ENST00000511288 RRAGCQ9HB90 399 aa17.91■□□□□ 0.46
ACSF2-220ENST00000511288 WDR90Q96KV7 1748 aa17.91■□□□□ 0.46
ACSF2-220ENST00000511288 SF3B3Q15393 1217 aaKnown RBP17.9■□□□□ 0.46
ACSF2-220ENST00000511288 GRIPAP1Q4V328 841 aa17.9■□□□□ 0.46
ACSF2-220ENST00000511288 ZNF277Q9NRM2 450 aaPredicted RBP17.9■□□□□ 0.46
ACSF2-220ENST00000511288 ATP6V0A2Q9Y487 856 aa17.9■□□□□ 0.46
ACSF2-220ENST00000511288 IRS4O14654 1257 aaPredicted RBP17.89■□□□□ 0.45
ACSF2-220ENST00000511288 BBOX1O75936 387 aa17.89■□□□□ 0.45
ACSF2-220ENST00000511288 TOMM70O94826 608 aa17.89■□□□□ 0.45
ACSF2-220ENST00000511288 PCCAP05165 728 aaPredicted RBP17.89■□□□□ 0.45
ACSF2-220ENST00000511288 RTL5Q5HYW3 569 aaPredicted RBP17.89■□□□□ 0.45
ACSF2-220ENST00000511288 DDX46Q7L014 1031 aaKnown RBP17.89■□□□□ 0.45
ACSF2-220ENST00000511288 CWC25Q9NXE8 425 aaPredicted RBP17.89■□□□□ 0.45
ACSF2-220ENST00000511288 COL4A1P02462 1669 aa17.88■□□□□ 0.45
ACSF2-220ENST00000511288 IGKV5-2P06315 115 aa17.88■□□□□ 0.45
ACSF2-220ENST00000511288 IARSP41252 1262 aaKnown RBP17.88■□□□□ 0.45
ACSF2-220ENST00000511288 FLIIQ13045 1269 aa17.88■□□□□ 0.45
ACSF2-220ENST00000511288 GRAPQ13588 217 aa17.88■□□□□ 0.45
ACSF2-220ENST00000511288 DPY19L2Q6NUT2 758 aa17.88■□□□□ 0.45
ACSF2-220ENST00000511288 GRAPLQ8TC17 118 aaPredicted RBP17.88■□□□□ 0.45
ACSF2-220ENST00000511288 LRRC37AA6NMS7 1700 aa17.88■□□□□ 0.45
ACSF2-220ENST00000511288 POTECB2RU33 542 aa17.87■□□□□ 0.45
ACSF2-220ENST00000511288 SP8Q8IXZ3 490 aa17.87■□□□□ 0.45
ACSF2-220ENST00000511288 COL4A5P29400 1685 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms