RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 NUTM1Q86Y26 1132 aa17.72■□□□□ 0.43
CCHCR1-227ENST00000508852 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
CCHCR1-227ENST00000508852 UTP14AQ9BVJ6 771 aaKnown RBP17.72■□□□□ 0.43
CCHCR1-227ENST00000508852 ADAMTS8Q9UP79 889 aa17.72■□□□□ 0.43
CCHCR1-227ENST00000508852 UBN2Q6ZU65 1347 aa17.72■□□□□ 0.43
CCHCR1-227ENST00000508852 NTSR2O95665 410 aa17.71■□□□□ 0.43
CCHCR1-227ENST00000508852 SLC10A5Q5PT55 438 aa17.71■□□□□ 0.43
CCHCR1-227ENST00000508852 LRP10Q7Z4F1 713 aa17.71■□□□□ 0.43
CCHCR1-227ENST00000508852 JDP2Q8WYK2 163 aa17.71■□□□□ 0.43
CCHCR1-227ENST00000508852 KLRG1Q96E93 195 aa17.71■□□□□ 0.43
CCHCR1-227ENST00000508852 L3MBTL3Q96JM7 780 aaPredicted RBP17.71■□□□□ 0.43
CCHCR1-227ENST00000508852 ABCC12Q96J65 1359 aa17.7■□□□□ 0.42
CCHCR1-227ENST00000508852 IARSP41252 1262 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-227ENST00000508852 SYNE4Q8N205 404 aa17.7■□□□□ 0.42
CCHCR1-227ENST00000508852 CFAP44Q96MT7 982 aa17.7■□□□□ 0.42
CCHCR1-227ENST00000508852 VPS33BQ9H267 617 aa17.7■□□□□ 0.42
CCHCR1-227ENST00000508852 TRIM35Q9UPQ4 493 aa17.7■□□□□ 0.42
CCHCR1-227ENST00000508852 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-227ENST00000508852 POTECB2RU33 542 aa17.69■□□□□ 0.42
CCHCR1-227ENST00000508852 DDNO94850 711 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-227ENST00000508852 COPS6Q7L5N1 327 aa17.69■□□□□ 0.42
CCHCR1-227ENST00000508852 ZNF277Q9NRM2 450 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-227ENST00000508852 DBF4Q9UBU7 674 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-227ENST00000508852 ZEB1P37275 1124 aaPredicted RBP17.68■□□□□ 0.42
CCHCR1-227ENST00000508852 HDGFL1Q5TGJ6 251 aa17.68■□□□□ 0.42
CCHCR1-227ENST00000508852 CHADLQ6NUI6 762 aa17.68■□□□□ 0.42
CCHCR1-227ENST00000508852 FZD9O00144 591 aa17.67■□□□□ 0.42
CCHCR1-227ENST00000508852 PPEF1O14829 653 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-227ENST00000508852 TCIRG1Q13488 830 aa17.67■□□□□ 0.42
CCHCR1-227ENST00000508852 JMYQ8N9B5 988 aa17.67■□□□□ 0.42
CCHCR1-227ENST00000508852 XAGE3Q8WTP9 111 aa17.67■□□□□ 0.42
CCHCR1-227ENST00000508852 HYPKQ9NX55 129 aa17.67■□□□□ 0.42
CCHCR1-227ENST00000508852 BBOX1O75936 387 aa17.66■□□□□ 0.42
CCHCR1-227ENST00000508852 EIF6P56537 245 aaKnown RBP17.66■□□□□ 0.42
CCHCR1-227ENST00000508852 GNAI1P63096 354 aa17.66■□□□□ 0.42
CCHCR1-227ENST00000508852 AIMP1Q12904 312 aaKnown RBP17.66■□□□□ 0.42
CCHCR1-227ENST00000508852 PROSER3Q2NL68 480 aa17.66■□□□□ 0.42
CCHCR1-227ENST00000508852 PNMA8AQ86V59 439 aaPredicted RBP17.66■□□□□ 0.42
CCHCR1-227ENST00000508852 LDHDQ86WU2 507 aa17.66■□□□□ 0.42
CCHCR1-227ENST00000508852 GPC2Q8N158 579 aa17.66■□□□□ 0.42
CCHCR1-227ENST00000508852 SUPT20HQ8NEM7 779 aa17.66■□□□□ 0.42
CCHCR1-227ENST00000508852 PLBD2Q8NHP8 589 aa17.66■□□□□ 0.42
CCHCR1-227ENST00000508852 HSP90B1P14625 803 aaKnown RBP17.65■□□□□ 0.42
CCHCR1-227ENST00000508852 TMC4Q7Z404 712 aa17.65■□□□□ 0.42
CCHCR1-227ENST00000508852 NLRP10Q86W26 655 aa17.65■□□□□ 0.42
CCHCR1-227ENST00000508852 NECTIN2Q92692 538 aa17.65■□□□□ 0.42
CCHCR1-227ENST00000508852 IFT57Q9NWB7 429 aa17.65■□□□□ 0.42
CCHCR1-227ENST00000508852 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
CCHCR1-227ENST00000508852 HACL1Q9UJ83 578 aa17.65■□□□□ 0.42
CCHCR1-227ENST00000508852 SH3TC1Q8TE82 1336 aa17.65■□□□□ 0.42
CCHCR1-227ENST00000508852 SNED1Q8TER0 1413 aa17.64■□□□□ 0.42
CCHCR1-227ENST00000508852 ANKRD13DQ6ZTN6 518 aa17.64■□□□□ 0.41
CCHCR1-227ENST00000508852 DDX46Q7L014 1031 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-227ENST00000508852 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.41
CCHCR1-227ENST00000508852 CHPF2Q9P2E5 772 aa17.64■□□□□ 0.41
CCHCR1-227ENST00000508852 ATP6V0A2Q9Y487 856 aa17.64■□□□□ 0.41
CCHCR1-227ENST00000508852 ANXA1P04083 346 aa17.63■□□□□ 0.41
CCHCR1-227ENST00000508852 IFFO2Q5TF58 517 aa17.63■□□□□ 0.41
CCHCR1-227ENST00000508852 LARGE2Q8N3Y3 721 aa17.63■□□□□ 0.41
CCHCR1-227ENST00000508852 ZNF853P0CG23 659 aa17.62■□□□□ 0.41
CCHCR1-227ENST00000508852 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
CCHCR1-227ENST00000508852 OLFM4Q6UX06 510 aa17.62■□□□□ 0.41
CCHCR1-227ENST00000508852 CREBZFQ9NS37 354 aa17.62■□□□□ 0.41
CCHCR1-227ENST00000508852 APAF1O14727 1248 aa17.61■□□□□ 0.41
CCHCR1-227ENST00000508852 LMOD1P29536 600 aaPredicted RBP17.61■□□□□ 0.41
CCHCR1-227ENST00000508852 TRIM28Q13263 835 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-227ENST00000508852 SP8Q8IXZ3 490 aa17.61■□□□□ 0.41
CCHCR1-227ENST00000508852 NIM1KQ8IY84 436 aa17.61■□□□□ 0.41
CCHCR1-227ENST00000508852 MBIPQ9NS73 344 aa17.61■□□□□ 0.41
CCHCR1-227ENST00000508852 ZNF541Q9H0D2 1346 aa17.61■□□□□ 0.41
CCHCR1-227ENST00000508852 LAMB2P55268 1798 aa17.61■□□□□ 0.41
CCHCR1-227ENST00000508852 EPHX2P34913 555 aa17.6■□□□□ 0.41
CCHCR1-227ENST00000508852 ABCC4O15439 1325 aa17.6■□□□□ 0.41
CCHCR1-227ENST00000508852 HTRA3P83110 453 aa17.59■□□□□ 0.41
CCHCR1-227ENST00000508852 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
CCHCR1-227ENST00000508852 GRAPQ13588 217 aa17.59■□□□□ 0.41
CCHCR1-227ENST00000508852 KRT24Q2M2I5 525 aa17.59■□□□□ 0.41
CCHCR1-227ENST00000508852 GRAPLQ8TC17 118 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-227ENST00000508852 ISCA1Q9BUE6 129 aa17.59■□□□□ 0.41
CCHCR1-227ENST00000508852 RTFDC1Q9BY42 306 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-227ENST00000508852 CLEC11AQ9Y240 323 aa17.59■□□□□ 0.41
CCHCR1-227ENST00000508852 PPIP5K2O43314 1243 aa17.58■□□□□ 0.4
CCHCR1-227ENST00000508852 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
CCHCR1-227ENST00000508852 NCBP3Q53F19 620 aaKnown RBP17.58■□□□□ 0.4
CCHCR1-227ENST00000508852 EAPPQ56P03 285 aaPredicted RBP17.58■□□□□ 0.4
CCHCR1-227ENST00000508852 DPP8Q6V1X1 898 aaPredicted RBP17.58■□□□□ 0.4
CCHCR1-227ENST00000508852 MPNDQ8N594 471 aa17.58■□□□□ 0.4
CCHCR1-227ENST00000508852 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
CCHCR1-227ENST00000508852 CCDC30Q5VVM6 783 aa17.57■□□□□ 0.4
CCHCR1-227ENST00000508852 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
CCHCR1-227ENST00000508852 RIC3Q7Z5B4 369 aa17.57■□□□□ 0.4
CCHCR1-227ENST00000508852 PASKQ96RG2 1323 aa17.56■□□□□ 0.4
CCHCR1-227ENST00000508852 TCERG1O14776 1098 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-227ENST00000508852 SF3B3Q15393 1217 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-227ENST00000508852 CCDC27Q2M243 656 aa17.56■□□□□ 0.4
CCHCR1-227ENST00000508852 ZNRF3Q9ULT6 936 aa17.56■□□□□ 0.4
CCHCR1-227ENST00000508852 GJA3Q9Y6H8 435 aa17.56■□□□□ 0.4
CCHCR1-227ENST00000508852 ADAMTSL1Q8N6G6 1762 aa17.56■□□□□ 0.4
CCHCR1-227ENST00000508852 USP50Q70EL3 339 aaPredicted RBP17.55■□□□□ 0.4
CCHCR1-227ENST00000508852 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms