RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 NLRP10Q86W26 655 aa21.79■■□□□ 1.08
CLDND1-219ENST00000508659 KLRG2A4D1S0 409 aaPredicted RBP21.78■■□□□ 1.08
CLDND1-219ENST00000508659 EXOSC9Q06265 439 aaKnown RBP21.78■■□□□ 1.08
CLDND1-219ENST00000508659 PRPF40BQ6NWY9 871 aaKnown RBP21.78■■□□□ 1.08
CLDND1-219ENST00000508659 ADCY9O60503 1353 aa21.77■■□□□ 1.08
CLDND1-219ENST00000508659 TCERG1O14776 1098 aaKnown RBP21.77■■□□□ 1.08
CLDND1-219ENST00000508659 MIER1Q8N108 512 aa21.77■■□□□ 1.08
CLDND1-219ENST00000508659 ZNF784Q8NCA9 323 aaPredicted RBP21.77■■□□□ 1.08
CLDND1-219ENST00000508659 TRMT112Q9UI30 125 aaKnown RBP21.76■■□□□ 1.07
CLDND1-219ENST00000508659 CRY2Q49AN0 593 aa21.75■■□□□ 1.07
CLDND1-219ENST00000508659 RPGRQ92834 1020 aaKnown RBP21.75■■□□□ 1.07
CLDND1-219ENST00000508659 ZNF219Q9P2Y4 722 aaPredicted RBP21.75■■□□□ 1.07
CLDND1-219ENST00000508659 SH3TC1Q8TE82 1336 aa21.75■■□□□ 1.07
CLDND1-219ENST00000508659 E9PSI1 815 aa21.74■■□□□ 1.07
CLDND1-219ENST00000508659 ATP5J2-PTCD1G3V325 749 aa21.74■■□□□ 1.07
CLDND1-219ENST00000508659 ISCA1Q9BUE6 129 aa21.74■■□□□ 1.07
CLDND1-219ENST00000508659 C21orf2O43822 256 aa21.73■■□□□ 1.07
CLDND1-219ENST00000508659 VAMP4O75379 141 aa21.73■■□□□ 1.07
CLDND1-219ENST00000508659 SLC4A2P04920 1241 aa21.73■■□□□ 1.07
CLDND1-219ENST00000508659 RASSF7Q02833 373 aa21.73■■□□□ 1.07
CLDND1-219ENST00000508659 SOGA3Q5TF21 947 aa21.73■■□□□ 1.07
CLDND1-219ENST00000508659 ALDH1B1P30837 517 aa21.72■■□□□ 1.07
CLDND1-219ENST00000508659 ZNF428Q96B54 188 aa21.72■■□□□ 1.07
CLDND1-219ENST00000508659 NLRP3Q96P20 1036 aa21.72■■□□□ 1.07
CLDND1-219ENST00000508659 MYD88Q99836 296 aa21.72■■□□□ 1.07
CLDND1-219ENST00000508659 CACNA1SQ13698 1873 aa21.71■■□□□ 1.07
CLDND1-219ENST00000508659 C9orf131Q5VYM1 1079 aa21.71■■□□□ 1.07
CLDND1-219ENST00000508659 MAP3K2Q9Y2U5 619 aa21.71■■□□□ 1.07
CLDND1-219ENST00000508659 FLIIQ13045 1269 aa21.7■■□□□ 1.06
CLDND1-219ENST00000508659 KSR2Q6VAB6 950 aa21.7■■□□□ 1.06
CLDND1-219ENST00000508659 RBM17Q96I25 401 aaKnown RBP21.7■■□□□ 1.06
CLDND1-219ENST00000508659 METTL22Q9BUU2 404 aaPredicted RBP21.7■■□□□ 1.06
CLDND1-219ENST00000508659 RNF181Q9P0P0 153 aa21.7■■□□□ 1.06
CLDND1-219ENST00000508659 PI4KAP2A4QPH2 592 aa21.69■■□□□ 1.06
CLDND1-219ENST00000508659 NFKBIEO00221 500 aa21.69■■□□□ 1.06
CLDND1-219ENST00000508659 HCLS1P14317 486 aaPredicted RBP21.69■■□□□ 1.06
CLDND1-219ENST00000508659 TRIM28Q13263 835 aaKnown RBP21.69■■□□□ 1.06
CLDND1-219ENST00000508659 SLC10A5Q5PT55 438 aa21.69■■□□□ 1.06
CLDND1-219ENST00000508659 C3orf67Q6ZVT6 689 aa21.69■■□□□ 1.06
CLDND1-219ENST00000508659 G2E3Q7L622 706 aa21.69■■□□□ 1.06
CLDND1-219ENST00000508659 PI4KAP1Q8N8J0 262 aa21.69■■□□□ 1.06
CLDND1-219ENST00000508659 SLX4Q8IY92 1834 aa21.69■■□□□ 1.06
CLDND1-219ENST00000508659 NEXNQ0ZGT2 675 aa21.68■■□□□ 1.06
CLDND1-219ENST00000508659 FKBP5Q13451 457 aaPredicted RBP21.68■■□□□ 1.06
CLDND1-219ENST00000508659 CCDC93Q567U6 631 aa21.68■■□□□ 1.06
CLDND1-219ENST00000508659 TAOK3Q9H2K8 898 aa21.68■■□□□ 1.06
CLDND1-219ENST00000508659 LMNB1P20700 586 aa21.67■■□□□ 1.06
CLDND1-219ENST00000508659 HOXA10P31260 410 aaPredicted RBP21.67■■□□□ 1.06
CLDND1-219ENST00000508659 RTL5Q5HYW3 569 aaPredicted RBP21.67■■□□□ 1.06
CLDND1-219ENST00000508659 SYNE4Q8N205 404 aa21.67■■□□□ 1.06
CLDND1-219ENST00000508659 CCDC191Q8NCU4 936 aa21.67■■□□□ 1.06
CLDND1-219ENST00000508659 FAM89AQ96GI7 184 aa21.67■■□□□ 1.06
CLDND1-219ENST00000508659 CWC25Q9NXE8 425 aaPredicted RBP21.67■■□□□ 1.06
CLDND1-219ENST00000508659 SLFN5Q08AF3 891 aa21.66■■□□□ 1.06
CLDND1-219ENST00000508659 ZNF526Q8TF50 670 aaPredicted RBP21.66■■□□□ 1.06
CLDND1-219ENST00000508659 LTBP3Q9NS15 1303 aa21.65■■□□□ 1.06
CLDND1-219ENST00000508659 PPEF1O14829 653 aaPredicted RBP21.65■■□□□ 1.06
CLDND1-219ENST00000508659 ZBTB38Q8NAP3 1195 aaPredicted RBP21.65■■□□□ 1.06
CLDND1-219ENST00000508659 C7orf43Q8WVR3 580 aa21.65■■□□□ 1.06
CLDND1-219ENST00000508659 CRAMP1Q96RY5 1269 aa21.65■■□□□ 1.06
CLDND1-219ENST00000508659 GPBP1L1Q9HC44 474 aaPredicted RBP21.65■■□□□ 1.06
CLDND1-219ENST00000508659 LAMB2P55268 1798 aa21.65■■□□□ 1.06
CLDND1-219ENST00000508659 DDX60Q8IY21 1712 aaKnown RBP21.64■■□□□ 1.06
CLDND1-219ENST00000508659 ABCC4O15439 1325 aa21.64■■□□□ 1.05
CLDND1-219ENST00000508659 HSP90B1P14625 803 aaKnown RBP21.64■■□□□ 1.05
CLDND1-219ENST00000508659 CDCA7LQ96GN5 454 aa21.64■■□□□ 1.05
CLDND1-219ENST00000508659 ZC3H4Q9UPT8 1303 aaKnown RBP21.63■■□□□ 1.05
CLDND1-219ENST00000508659 FER1L6Q2WGJ9 1857 aa21.63■■□□□ 1.05
CLDND1-219ENST00000508659 IRS4O14654 1257 aaPredicted RBP21.63■■□□□ 1.05
CLDND1-219ENST00000508659 DDX46Q7L014 1031 aaKnown RBP21.63■■□□□ 1.05
CLDND1-219ENST00000508659 DNAAF4Q8WXU2 420 aa21.63■■□□□ 1.05
CLDND1-219ENST00000508659 TIAM2Q8IVF5 1701 aa21.63■■□□□ 1.05
CLDND1-219ENST00000508659 PCCAP05165 728 aaPredicted RBP21.62■■□□□ 1.05
CLDND1-219ENST00000508659 OLFM4Q6UX06 510 aa21.62■■□□□ 1.05
CLDND1-219ENST00000508659 RTKN2Q8IZC4 609 aa21.62■■□□□ 1.05
CLDND1-219ENST00000508659 TMX4Q9H1E5 349 aaPredicted RBP21.62■■□□□ 1.05
CLDND1-219ENST00000508659 IGKV5-2P06315 115 aa21.61■■□□□ 1.05
CLDND1-219ENST00000508659 PRELPP51888 382 aa21.61■■□□□ 1.05
CLDND1-219ENST00000508659 CWF19L2Q2TBE0 894 aaKnown RBP21.61■■□□□ 1.05
CLDND1-219ENST00000508659 CC2D2BQ6DHV5 1058 aa21.61■■□□□ 1.05
CLDND1-219ENST00000508659 NEURL1BA8MQ27 555 aa21.6■■□□□ 1.05
CLDND1-219ENST00000508659 FKBP4Q02790 459 aaKnown RBP eCLIP21.6■■□□□ 1.05
CLDND1-219ENST00000508659 SBF1O95248 1867 aa21.59■■□□□ 1.05
CLDND1-219ENST00000508659 HNRNPUQ00839 825 aaKnown RBP eCLIP21.59■■□□□ 1.05
CLDND1-219ENST00000508659 GRAPQ13588 217 aa21.59■■□□□ 1.05
CLDND1-219ENST00000508659 GRAPLQ8TC17 118 aaPredicted RBP21.59■■□□□ 1.05
CLDND1-219ENST00000508659 SNED1Q8TER0 1413 aa21.59■■□□□ 1.05
CLDND1-219ENST00000508659 CACNA1FO60840 1977 aa21.59■■□□□ 1.05
CLDND1-219ENST00000508659 CDHR2Q9BYE9 1310 aa21.58■■□□□ 1.05
CLDND1-219ENST00000508659 SF3B3Q15393 1217 aaKnown RBP21.58■■□□□ 1.05
CLDND1-219ENST00000508659 GRIPAP1Q4V328 841 aa21.58■■□□□ 1.05
CLDND1-219ENST00000508659 LINS1Q8NG48 757 aa21.58■■□□□ 1.05
CLDND1-219ENST00000508659 F6X3S4 739 aa21.57■■□□□ 1.04
CLDND1-219ENST00000508659 ATP6V0A2Q9Y487 856 aa21.57■■□□□ 1.04
CLDND1-219ENST00000508659 KDM2BQ8NHM5 1336 aa21.56■■□□□ 1.04
CLDND1-219ENST00000508659 PDE8AO60658 829 aa21.56■■□□□ 1.04
CLDND1-219ENST00000508659 BBOX1O75936 387 aa21.56■■□□□ 1.04
CLDND1-219ENST00000508659 CCDC152Q4G0S7 254 aa21.56■■□□□ 1.04
CLDND1-219ENST00000508659 TRMT2AQ8IZ69 625 aaKnown RBP21.56■■□□□ 1.04
CLDND1-219ENST00000508659 JARID2Q92833 1246 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms