RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 C3orf67Q6ZVT6 689 aa21.21■□□□□ 0.99
LMNA-222ENST00000508500 COPS6Q7L5N1 327 aa21.21■□□□□ 0.99
LMNA-222ENST00000508500 SLC51AQ86UW1 340 aa21.21■□□□□ 0.99
LMNA-222ENST00000508500 APAF1O14727 1248 aa21.2■□□□□ 0.98
LMNA-222ENST00000508500 CCDC93Q567U6 631 aa21.2■□□□□ 0.98
LMNA-222ENST00000508500 SOGA3Q5TF21 947 aa21.2■□□□□ 0.98
LMNA-222ENST00000508500 XAGE3Q8WTP9 111 aa21.2■□□□□ 0.98
LMNA-222ENST00000508500 ZNF853P0CG23 659 aa21.19■□□□□ 0.98
LMNA-222ENST00000508500 ALDH1B1P30837 517 aa21.19■□□□□ 0.98
LMNA-222ENST00000508500 AIMP1Q12904 312 aaKnown RBP21.19■□□□□ 0.98
LMNA-222ENST00000508500 CFAP44Q96MT7 982 aa21.19■□□□□ 0.98
LMNA-222ENST00000508500 DDX21Q9NR30 783 aaKnown RBP eCLIP21.19■□□□□ 0.98
LMNA-222ENST00000508500 SCN4AP35499 1836 aa21.18■□□□□ 0.98
LMNA-222ENST00000508500 HOXA10P31260 410 aaPredicted RBP21.18■□□□□ 0.98
LMNA-222ENST00000508500 MBIPQ9NS73 344 aa21.18■□□□□ 0.98
LMNA-222ENST00000508500 CHPF2Q9P2E5 772 aa21.18■□□□□ 0.98
LMNA-222ENST00000508500 DDX60Q8IY21 1712 aaKnown RBP21.18■□□□□ 0.98
LMNA-222ENST00000508500 FKBP4Q02790 459 aaKnown RBP eCLIP21.17■□□□□ 0.98
LMNA-222ENST00000508500 PARP10Q53GL7 1025 aa21.17■□□□□ 0.98
LMNA-222ENST00000508500 DDNO94850 711 aaPredicted RBP21.16■□□□□ 0.98
LMNA-222ENST00000508500 DPY19L2Q6NUT2 758 aa21.16■□□□□ 0.98
LMNA-222ENST00000508500 ZNF277Q9NRM2 450 aaPredicted RBP21.16■□□□□ 0.98
LMNA-222ENST00000508500 ADAMTSL1Q8N6G6 1762 aa21.15■□□□□ 0.98
LMNA-222ENST00000508500 COL4A5P29400 1685 aa21.15■□□□□ 0.98
LMNA-222ENST00000508500 SLC10A5Q5PT55 438 aa21.15■□□□□ 0.98
LMNA-222ENST00000508500 COL13A1Q5TAT6 717 aaPredicted RBP21.15■□□□□ 0.98
LMNA-222ENST00000508500 PPP1R42Q7Z4L9 355 aa21.15■□□□□ 0.98
LMNA-222ENST00000508500 NLRP10Q86W26 655 aa21.15■□□□□ 0.98
LMNA-222ENST00000508500 SYNE4Q8N205 404 aa21.15■□□□□ 0.98
LMNA-222ENST00000508500 HOXB7P09629 217 aa21.14■□□□□ 0.97
LMNA-222ENST00000508500 TCIRG1Q13488 830 aa21.14■□□□□ 0.97
LMNA-222ENST00000508500 HDGFL1Q5TGJ6 251 aa21.14■□□□□ 0.97
LMNA-222ENST00000508500 DUSP27Q5VZP5 1158 aa21.14■□□□□ 0.97
LMNA-222ENST00000508500 UTP14AQ9BVJ6 771 aaKnown RBP21.14■□□□□ 0.97
LMNA-222ENST00000508500 RTKN2Q8IZC4 609 aa21.13■□□□□ 0.97
LMNA-222ENST00000508500 RPGRQ92834 1020 aaKnown RBP21.13■□□□□ 0.97
LMNA-222ENST00000508500 CRAMP1Q96RY5 1269 aa21.13■□□□□ 0.97
LMNA-222ENST00000508500 ZNF428Q96B54 188 aa21.12■□□□□ 0.97
LMNA-222ENST00000508500 ZNF541Q9H0D2 1346 aa21.11■□□□□ 0.97
LMNA-222ENST00000508500 IARSP41252 1262 aaKnown RBP21.11■□□□□ 0.97
LMNA-222ENST00000508500 PSMD1Q99460 953 aa21.11■□□□□ 0.97
LMNA-222ENST00000508500 IFT57Q9NWB7 429 aa21.11■□□□□ 0.97
LMNA-222ENST00000508500 POTEIP0CG38 1075 aa21.1■□□□□ 0.97
LMNA-222ENST00000508500 POTEJP0CG39 1038 aa21.1■□□□□ 0.97
LMNA-222ENST00000508500 HSP90AB3PQ58FF7 597 aa21.1■□□□□ 0.97
LMNA-222ENST00000508500 RBM17Q96I25 401 aaKnown RBP21.1■□□□□ 0.97
LMNA-222ENST00000508500 L3MBTL3Q96JM7 780 aaPredicted RBP21.1■□□□□ 0.97
LMNA-222ENST00000508500 NLRP3Q96P20 1036 aa21.1■□□□□ 0.97
LMNA-222ENST00000508500 DBF4Q9UBU7 674 aaPredicted RBP21.1■□□□□ 0.97
LMNA-222ENST00000508500 RNF123Q5XPI4 1314 aa21.09■□□□□ 0.97
LMNA-222ENST00000508500 TCERG1O14776 1098 aaKnown RBP21.09■□□□□ 0.97
LMNA-222ENST00000508500 HCLS1P14317 486 aaPredicted RBP21.09■□□□□ 0.97
LMNA-222ENST00000508500 PLBD2Q8NHP8 589 aa21.09■□□□□ 0.97
LMNA-222ENST00000508500 COL4A1P02462 1669 aa21.09■□□□□ 0.97
LMNA-222ENST00000508500 ABCC4O15439 1325 aa21.08■□□□□ 0.97
LMNA-222ENST00000508500 FZD9O00144 591 aa21.08■□□□□ 0.97
LMNA-222ENST00000508500 ELL2O00472 640 aaPredicted RBP21.08■□□□□ 0.97
LMNA-222ENST00000508500 PPEF1O14829 653 aaPredicted RBP21.08■□□□□ 0.97
LMNA-222ENST00000508500 GNAI1P63096 354 aa21.08■□□□□ 0.97
LMNA-222ENST00000508500 CC2D2BQ6DHV5 1058 aa21.08■□□□□ 0.97
LMNA-222ENST00000508500 ANKRD13DQ6ZTN6 518 aa21.08■□□□□ 0.97
LMNA-222ENST00000508500 C8orf58Q8NAV2 365 aa21.08■□□□□ 0.97
LMNA-222ENST00000508500 ISCA1Q9BUE6 129 aa21.08■□□□□ 0.97
LMNA-222ENST00000508500 LTBP1Q14766 1721 aa21.07■□□□□ 0.96
LMNA-222ENST00000508500 PHAXQ9H814 394 aaKnown RBP21.07■□□□□ 0.96
LMNA-222ENST00000508500 TRMT112Q9UI30 125 aaKnown RBP21.07■□□□□ 0.96
LMNA-222ENST00000508500 ZNF316A6NFI3 1004 aaPredicted RBP21.06■□□□□ 0.96
LMNA-222ENST00000508500 CHADLQ6NUI6 762 aa21.06■□□□□ 0.96
LMNA-222ENST00000508500 HYPKQ9NX55 129 aa21.06■□□□□ 0.96
LMNA-222ENST00000508500 LRRC37AA6NMS7 1700 aa21.06■□□□□ 0.96
LMNA-222ENST00000508500 SH3TC1Q8TE82 1336 aa21.05■□□□□ 0.96
LMNA-222ENST00000508500 PASKQ96RG2 1323 aa21.05■□□□□ 0.96
LMNA-222ENST00000508500 ATP5J2-PTCD1G3V325 749 aa21.05■□□□□ 0.96
LMNA-222ENST00000508500 CREBZFQ9NS37 354 aa21.05■□□□□ 0.96
LMNA-222ENST00000508500 TSPYL6Q8N831 410 aa21.04■□□□□ 0.96
LMNA-222ENST00000508500 TAF1DQ9H5J8 278 aaPredicted RBP21.04■□□□□ 0.96
LMNA-222ENST00000508500 ATP6V0A2Q9Y487 856 aa21.04■□□□□ 0.96
LMNA-222ENST00000508500 HSPA1AP0DMV8 641 aaKnown RBP21.03■□□□□ 0.96
LMNA-222ENST00000508500 HSPA1BP0DMV9 641 aaKnown RBP21.03■□□□□ 0.96
LMNA-222ENST00000508500 CALD1Q05682 793 aaKnown RBP21.03■□□□□ 0.96
LMNA-222ENST00000508500 FAM89AQ96GI7 184 aa21.03■□□□□ 0.96
LMNA-222ENST00000508500 GRIPAP1Q4V328 841 aa21.02■□□□□ 0.96
LMNA-222ENST00000508500 DUOX1Q9NRD9 1551 aa21.02■□□□□ 0.95
LMNA-222ENST00000508500 ITGBL1O95965 494 aaPredicted RBP21.01■□□□□ 0.95
LMNA-222ENST00000508500 TRIM28Q13263 835 aaKnown RBP21.01■□□□□ 0.95
LMNA-222ENST00000508500 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
LMNA-222ENST00000508500 WWC1Q8IX03 1113 aa21.01■□□□□ 0.95
LMNA-222ENST00000508500 TSR2Q969E8 191 aaKnown RBP21.01■□□□□ 0.95
LMNA-222ENST00000508500 CACNA1FO60840 1977 aa21.01■□□□□ 0.95
LMNA-222ENST00000508500 IQCA1LA6NCM1 817 aa21■□□□□ 0.95
LMNA-222ENST00000508500 BBOX1O75936 387 aa21■□□□□ 0.95
LMNA-222ENST00000508500 LDHDQ86WU2 507 aa21■□□□□ 0.95
LMNA-222ENST00000508500 SP8Q8IXZ3 490 aa21■□□□□ 0.95
LMNA-222ENST00000508500 JDP2Q8WYK2 163 aa21■□□□□ 0.95
LMNA-222ENST00000508500 GRAPQ13588 217 aa20.99■□□□□ 0.95
LMNA-222ENST00000508500 RTL5Q5HYW3 569 aaPredicted RBP20.99■□□□□ 0.95
LMNA-222ENST00000508500 GPC2Q8N158 579 aa20.99■□□□□ 0.95
LMNA-222ENST00000508500 LARGE2Q8N3Y3 721 aa20.99■□□□□ 0.95
LMNA-222ENST00000508500 GRAPLQ8TC17 118 aaPredicted RBP20.99■□□□□ 0.95
LMNA-222ENST00000508500 RTFDC1Q9BY42 306 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms