RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 CLEC4GQ6UXB4 293 aa12.32□□□□□ -0.44
UBE2D3-223ENST00000508249 USP16Q9Y5T5 823 aa12.32□□□□□ -0.44
UBE2D3-223ENST00000508249 KDM3BQ7LBC6 1761 aa12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 DGKZQ13574 1117 aa12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 PAXIP1Q6ZW49 1069 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 HHIPL1Q96JK4 782 aa12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 CFAP53Q96M91 514 aa12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 BEGAINQ9BUH8 593 aa12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 TEX13AQ9BXU3 409 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 GJA3Q9Y6H8 435 aa12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 LRRC37AA6NMS7 1700 aa12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 AKAP11Q9UKA4 1901 aa12.31□□□□□ -0.44
UBE2D3-223ENST00000508249 CA12O43570 354 aa12.3□□□□□ -0.44
UBE2D3-223ENST00000508249 CIAPIN1Q6FI81 312 aa12.3□□□□□ -0.44
UBE2D3-223ENST00000508249 USP50Q70EL3 339 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-223ENST00000508249 FMNL2Q96PY5 1086 aa12.3□□□□□ -0.44
UBE2D3-223ENST00000508249 POLR2AP24928 1970 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-223ENST00000508249 RGL2O15211 777 aa12.29□□□□□ -0.44
UBE2D3-223ENST00000508249 NPHP1O15259 732 aa12.29□□□□□ -0.44
UBE2D3-223ENST00000508249 DIAPH1O60610 1272 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-223ENST00000508249 SOX10P56693 466 aa12.29□□□□□ -0.44
UBE2D3-223ENST00000508249 HLFQ16534 295 aa12.29□□□□□ -0.44
UBE2D3-223ENST00000508249 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
UBE2D3-223ENST00000508249 GLIS2Q9BZE0 524 aaPredicted RBP12.29□□□□□ -0.44
UBE2D3-223ENST00000508249 GPRC5DQ9NZD1 345 aa12.29□□□□□ -0.44
UBE2D3-223ENST00000508249 TAF1P21675 1872 aa12.29□□□□□ -0.44
UBE2D3-223ENST00000508249 ANKRD36CQ5JPF3 1778 aa12.28□□□□□ -0.44
UBE2D3-223ENST00000508249 CELF2O95319 508 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-223ENST00000508249 PGAP2Q9UHJ9 254 aa12.28□□□□□ -0.44
UBE2D3-223ENST00000508249 NIP7Q9Y221 180 aaKnown RBP eCLIP12.28□□□□□ -0.44
UBE2D3-223ENST00000508249 GNAT3A8MTJ3 354 aa12.27□□□□□ -0.45
UBE2D3-223ENST00000508249 FAM155AB1AL88 458 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-223ENST00000508249 LMOD1P29536 600 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-223ENST00000508249 HIRAP54198 1017 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-223ENST00000508249 EIF6P56537 245 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-223ENST00000508249 TEFQ10587 303 aa12.27□□□□□ -0.45
UBE2D3-223ENST00000508249 RALBP1Q15311 655 aa12.27□□□□□ -0.45
UBE2D3-223ENST00000508249 PRPF38BQ5VTL8 546 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-223ENST00000508249 JDP2Q8WYK2 163 aa12.27□□□□□ -0.45
UBE2D3-223ENST00000508249 DLG5Q8TDM6 1919 aa12.27□□□□□ -0.45
UBE2D3-223ENST00000508249 COL4A1P02462 1669 aa12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 FAM177BA6PVY3 158 aa12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 ALDH1B1P30837 517 aa12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 HOXA10P31260 410 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 DLK2Q6UY11 383 aa12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 TPTE2Q6XPS3 522 aa12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 C3orf67Q6ZVT6 689 aa12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 NUTM1Q86Y26 1132 aa12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 TRPM4Q8TD43 1214 aa12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 ADARB2Q9NS39 739 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 NUDCQ9Y266 331 aa12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 UBN2Q6ZU65 1347 aa12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 IBTKQ9P2D0 1353 aaPredicted RBP12.26□□□□□ -0.45
UBE2D3-223ENST00000508249 SZT2Q5T011 3432 aa12.25□□□□□ -0.45
UBE2D3-223ENST00000508249 SHTN1A0MZ66 631 aa12.25□□□□□ -0.45
UBE2D3-223ENST00000508249 PPP2R1AP30153 589 aa12.25□□□□□ -0.45
UBE2D3-223ENST00000508249 LARGE2Q8N3Y3 721 aa12.25□□□□□ -0.45
UBE2D3-223ENST00000508249 ZNF652Q9Y2D9 606 aa12.25□□□□□ -0.45
UBE2D3-223ENST00000508249 CXCL9Q07325 125 aa12.24□□□□□ -0.45
UBE2D3-223ENST00000508249 AOC3Q16853 763 aa12.24□□□□□ -0.45
UBE2D3-223ENST00000508249 CC2D2BQ6DHV5 1058 aa12.24□□□□□ -0.45
UBE2D3-223ENST00000508249 DDX60Q8IY21 1712 aaKnown RBP12.24□□□□□ -0.45
UBE2D3-223ENST00000508249 PHACTR3Q96KR7 559 aa12.24□□□□□ -0.45
UBE2D3-223ENST00000508249 SCN9AQ15858 1988 aa12.23□□□□□ -0.45
UBE2D3-223ENST00000508249 BTBD11A6QL63 1104 aa12.23□□□□□ -0.45
UBE2D3-223ENST00000508249 GMPSP49915 693 aaPredicted RBP12.23□□□□□ -0.45
UBE2D3-223ENST00000508249 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
UBE2D3-223ENST00000508249 GAS2L2Q8NHY3 880 aa12.23□□□□□ -0.45
UBE2D3-223ENST00000508249 CDHR2Q9BYE9 1310 aa12.22□□□□□ -0.45
UBE2D3-223ENST00000508249 PPEF1O14829 653 aaPredicted RBP12.22□□□□□ -0.45
UBE2D3-223ENST00000508249 NOGQ13253 232 aa12.22□□□□□ -0.45
UBE2D3-223ENST00000508249 NIM1KQ8IY84 436 aa12.22□□□□□ -0.45
UBE2D3-223ENST00000508249 SAGE1Q9NXZ1 904 aa12.22□□□□□ -0.45
UBE2D3-223ENST00000508249 RBBP6Q7Z6E9 1792 aaKnown RBP12.22□□□□□ -0.45
UBE2D3-223ENST00000508249 PSME4Q14997 1843 aa12.21□□□□□ -0.45
UBE2D3-223ENST00000508249 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-223ENST00000508249 PPIP5K2O43314 1243 aa12.21□□□□□ -0.45
UBE2D3-223ENST00000508249 NTSR2O95665 410 aa12.21□□□□□ -0.45
UBE2D3-223ENST00000508249 SNRPA1P09661 255 aaKnown RBP12.21□□□□□ -0.45
UBE2D3-223ENST00000508249 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-223ENST00000508249 CRAMP1Q96RY5 1269 aa12.21□□□□□ -0.45
UBE2D3-223ENST00000508249 RTFDC1Q9BY42 306 aaPredicted RBP12.21□□□□□ -0.45
UBE2D3-223ENST00000508249 ZNF646O15015 1829 aaPredicted RBP12.21□□□□□ -0.46
UBE2D3-223ENST00000508249 YDJCA8MPS7 323 aa12.2□□□□□ -0.46
UBE2D3-223ENST00000508249 U2SURPO15042 1029 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-223ENST00000508249 EGFRP00533 1210 aa12.2□□□□□ -0.46
UBE2D3-223ENST00000508249 ZC3H15Q8WU90 426 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-223ENST00000508249 RSPH6AQ9H0K4 717 aa12.2□□□□□ -0.46
UBE2D3-223ENST00000508249 ZNF408Q9H9D4 720 aa12.2□□□□□ -0.46
UBE2D3-223ENST00000508249 MYBBP1AQ9BQG0 1328 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-223ENST00000508249 HUNKP57058 714 aa12.19□□□□□ -0.46
UBE2D3-223ENST00000508249 GRIPAP1Q4V328 841 aa12.19□□□□□ -0.46
UBE2D3-223ENST00000508249 TTLL7Q6ZT98 887 aa12.19□□□□□ -0.46
UBE2D3-223ENST00000508249 NPM2Q86SE8 214 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-223ENST00000508249 PNNQ9H307 717 aaKnown RBP12.19□□□□□ -0.46
UBE2D3-223ENST00000508249 RNF186Q9NXI6 227 aa12.19□□□□□ -0.46
UBE2D3-223ENST00000508249 ZNRF3Q9ULT6 936 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms