RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 FSD1Q9BTV5 496 aa26.54■■□□□ 1.84
SPCS3-203ENST00000507678 A0A087WZG4 1122 aa26.54■■□□□ 1.84
SPCS3-203ENST00000507678 NMIQ13287 307 aaPredicted RBP26.54■■□□□ 1.84
SPCS3-203ENST00000507678 BRINP3Q76B58 766 aa26.54■■□□□ 1.84
SPCS3-203ENST00000507678 INTS4Q96HW7 963 aaKnown RBP26.54■■□□□ 1.84
SPCS3-203ENST00000507678 ISY1Q9ULR0 285 aaKnown RBP26.54■■□□□ 1.84
SPCS3-203ENST00000507678 LRP10Q7Z4F1 713 aa26.53■■□□□ 1.84
SPCS3-203ENST00000507678 STRN4Q9NRL3 753 aa26.53■■□□□ 1.84
SPCS3-203ENST00000507678 RUFY3Q7L099 469 aa26.52■■□□□ 1.84
SPCS3-203ENST00000507678 ADAMTS7Q9UKP4 1686 aa26.51■■□□□ 1.84
SPCS3-203ENST00000507678 COL18A1P39060 1754 aa26.51■■□□□ 1.83
SPCS3-203ENST00000507678 NASPP49321 788 aaPredicted RBP26.51■■□□□ 1.83
SPCS3-203ENST00000507678 TTC14Q96N46 770 aa26.51■■□□□ 1.83
SPCS3-203ENST00000507678 NAP1L5Q96NT1 182 aaPredicted RBP26.51■■□□□ 1.83
SPCS3-203ENST00000507678 LARGE1O95461 756 aa26.5■■□□□ 1.83
SPCS3-203ENST00000507678 ZNF330Q9Y3S2 320 aaPredicted RBP26.5■■□□□ 1.83
SPCS3-203ENST00000507678 A0A0D9SFI3 127 aa26.5■■□□□ 1.83
SPCS3-203ENST00000507678 EPB41L2O43491 1005 aaKnown RBP26.5■■□□□ 1.83
SPCS3-203ENST00000507678 TFCP2Q12800 502 aa26.5■■□□□ 1.83
SPCS3-203ENST00000507678 DCCP43146 1447 aa26.49■■□□□ 1.83
SPCS3-203ENST00000507678 IL17RAQ96F46 866 aa26.49■■□□□ 1.83
SPCS3-203ENST00000507678 RBM8AQ9Y5S9 174 aaKnown RBP26.49■■□□□ 1.83
SPCS3-203ENST00000507678 ZCRB1Q8TBF4 217 aaKnown RBP26.49■■□□□ 1.83
SPCS3-203ENST00000507678 LIMCH1Q9UPQ0 1083 aa26.49■■□□□ 1.83
SPCS3-203ENST00000507678 CCDC171Q6TFL3 1326 aa26.48■■□□□ 1.83
SPCS3-203ENST00000507678 A1BGP04217 495 aa26.48■■□□□ 1.83
SPCS3-203ENST00000507678 TTLL7Q6ZT98 887 aa26.48■■□□□ 1.83
SPCS3-203ENST00000507678 TMEM63CQ9P1W3 806 aa26.48■■□□□ 1.83
SPCS3-203ENST00000507678 COL9A3Q14050 684 aaPredicted RBP26.47■■□□□ 1.83
SPCS3-203ENST00000507678 CCDC83Q8IWF9 413 aa26.47■■□□□ 1.83
SPCS3-203ENST00000507678 PDRG1Q9NUG6 133 aa26.47■■□□□ 1.83
SPCS3-203ENST00000507678 NBPF26B4DH59 902 aa26.47■■□□□ 1.83
SPCS3-203ENST00000507678 PTPN12Q05209 780 aaKnown RBP26.47■■□□□ 1.83
SPCS3-203ENST00000507678 NBPF14Q5TI25 921 aa26.47■■□□□ 1.83
SPCS3-203ENST00000507678 NBPF10Q6P3W6 841 aaKnown RBP26.47■■□□□ 1.83
SPCS3-203ENST00000507678 NBPF15Q8N660 670 aa26.47■■□□□ 1.83
SPCS3-203ENST00000507678 TRIM44Q96DX7 344 aaPredicted RBP26.47■■□□□ 1.83
SPCS3-203ENST00000507678 TCEANC2Q96MN5 208 aa26.47■■□□□ 1.83
SPCS3-203ENST00000507678 ZBTB3Q9H5J0 574 aa26.47■■□□□ 1.83
SPCS3-203ENST00000507678 CHGBP05060 677 aa26.46■■□□□ 1.83
SPCS3-203ENST00000507678 DNAJC2Q99543 621 aaKnown RBP26.46■■□□□ 1.83
SPCS3-203ENST00000507678 SYCE3A1L190 88 aa26.46■■□□□ 1.83
SPCS3-203ENST00000507678 PRIM1P49642 420 aaKnown RBP26.46■■□□□ 1.83
SPCS3-203ENST00000507678 LMBR1LQ6UX01 489 aa26.46■■□□□ 1.83
SPCS3-203ENST00000507678 DBNLQ9UJU6 430 aaKnown RBP26.46■■□□□ 1.83
SPCS3-203ENST00000507678 ZKSCAN1P17029 563 aaPredicted RBP26.45■■□□□ 1.82
SPCS3-203ENST00000507678 HSP90AA2PQ14568 343 aaPredicted RBP26.45■■□□□ 1.82
SPCS3-203ENST00000507678 CYP46A1Q9Y6A2 500 aa26.45■■□□□ 1.82
SPCS3-203ENST00000507678 CREB3L3Q68CJ9 461 aa26.44■■□□□ 1.82
SPCS3-203ENST00000507678 SMC3Q9UQE7 1217 aa26.44■■□□□ 1.82
SPCS3-203ENST00000507678 PLBD2Q8NHP8 589 aa26.44■■□□□ 1.82
SPCS3-203ENST00000507678 WDR17Q8IZU2 1322 aa26.44■■□□□ 1.82
SPCS3-203ENST00000507678 WDR33Q9C0J8 1336 aaKnown RBP26.44■■□□□ 1.82
SPCS3-203ENST00000507678 TNNI3KQ59H18 835 aa26.43■■□□□ 1.82
SPCS3-203ENST00000507678 ZNF589Q86UQ0 364 aaPredicted RBP26.43■■□□□ 1.82
SPCS3-203ENST00000507678 FPGT-TNNI3KV9GXZ4 949 aa26.43■■□□□ 1.82
SPCS3-203ENST00000507678 LMTK3Q96Q04 1460 aa26.43■■□□□ 1.82
SPCS3-203ENST00000507678 RFX5P48382 616 aaPredicted RBP26.43■■□□□ 1.82
SPCS3-203ENST00000507678 ZNF445P59923 1031 aa26.43■■□□□ 1.82
SPCS3-203ENST00000507678 NECTIN1Q15223 517 aa26.43■■□□□ 1.82
SPCS3-203ENST00000507678 NECAB1Q8N987 351 aa26.43■■□□□ 1.82
SPCS3-203ENST00000507678 TAF6LQ9Y6J9 622 aa26.43■■□□□ 1.82
SPCS3-203ENST00000507678 CRYBG1Q9Y4K1 1723 aa26.43■■□□□ 1.82
SPCS3-203ENST00000507678 GADD45BO75293 160 aaPredicted RBP26.42■■□□□ 1.82
SPCS3-203ENST00000507678 DBNDD2Q9BQY9 259 aa26.42■■□□□ 1.82
SPCS3-203ENST00000507678 COPRSQ9NQ92 184 aa26.42■■□□□ 1.82
SPCS3-203ENST00000507678 PCDH11XQ9BZA7 1347 aa26.42■■□□□ 1.82
SPCS3-203ENST00000507678 PCDH11YQ9BZA8 1340 aa26.42■■□□□ 1.82
SPCS3-203ENST00000507678 CPDO75976 1380 aa26.42■■□□□ 1.82
SPCS3-203ENST00000507678 RPAP1Q9BWH6 1393 aaPredicted RBP26.42■■□□□ 1.82
SPCS3-203ENST00000507678 RBSNQ9H1K0 784 aa26.42■■□□□ 1.82
SPCS3-203ENST00000507678 EVA1CP58658 441 aa26.42■■□□□ 1.82
SPCS3-203ENST00000507678 ANP32BQ92688 251 aaKnown RBP26.41■■□□□ 1.82
SPCS3-203ENST00000507678 SLAIN2Q9P270 581 aa26.41■■□□□ 1.82
SPCS3-203ENST00000507678 HIP1O00291 1037 aa26.41■■□□□ 1.82
SPCS3-203ENST00000507678 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.41■■□□□ 1.82
SPCS3-203ENST00000507678 SYT1P21579 422 aa26.4■■□□□ 1.82
SPCS3-203ENST00000507678 NEUROD6Q96NK8 337 aa26.4■■□□□ 1.82
SPCS3-203ENST00000507678 SLC27A2O14975 620 aa26.4■■□□□ 1.82
SPCS3-203ENST00000507678 USP48Q86UV5 1035 aa26.4■■□□□ 1.82
SPCS3-203ENST00000507678 MAP4K1Q92918 833 aa26.4■■□□□ 1.82
SPCS3-203ENST00000507678 ZSWIM6Q9HCJ5 1215 aa26.4■■□□□ 1.82
SPCS3-203ENST00000507678 ZNF335Q9H4Z2 1342 aaPredicted RBP26.4■■□□□ 1.82
SPCS3-203ENST00000507678 DDX46Q7L014 1031 aaKnown RBP26.39■■□□□ 1.82
SPCS3-203ENST00000507678 CNPY2Q9Y2B0 182 aa26.39■■□□□ 1.82
SPCS3-203ENST00000507678 MRC1P22897 1456 aa26.39■■□□□ 1.81
SPCS3-203ENST00000507678 STX6O43752 255 aa26.38■■□□□ 1.81
SPCS3-203ENST00000507678 IL2RBP14784 551 aa26.38■■□□□ 1.81
SPCS3-203ENST00000507678 GJB2P29033 226 aa26.38■■□□□ 1.81
SPCS3-203ENST00000507678 VPS53Q5VIR6 699 aa26.38■■□□□ 1.81
SPCS3-203ENST00000507678 CCDC129Q6ZRS4 1044 aa26.38■■□□□ 1.81
SPCS3-203ENST00000507678 SEC62Q99442 399 aaKnown RBP26.38■■□□□ 1.81
SPCS3-203ENST00000507678 AFDNP55196 1824 aaKnown RBP26.38■■□□□ 1.81
SPCS3-203ENST00000507678 ERBB4Q15303 1308 aa26.37■■□□□ 1.81
SPCS3-203ENST00000507678 ME3Q16798 604 aa26.37■■□□□ 1.81
SPCS3-203ENST00000507678 RABL6Q3YEC7 729 aaPredicted RBP26.37■■□□□ 1.81
SPCS3-203ENST00000507678 RNF214Q8ND24 703 aa26.37■■□□□ 1.81
SPCS3-203ENST00000507678 ZNF594Q96JF6 807 aaPredicted RBP26.37■■□□□ 1.81
SPCS3-203ENST00000507678 MBD3O95983 291 aa26.36■■□□□ 1.81
SPCS3-203ENST00000507678 ZSCAN22P10073 491 aaPredicted RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms