RNA–Protein interactions for RNA: ENST00000507588.1

FGFR3-209, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best)

Gene FGFR3, Length 336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-209ENST00000507588 FKBP4Q02790 459 aaKnown RBP eCLIP24.37■■□□□ 1.493e-11■□□□□ 10.1
FGFR3-209ENST00000507588 FSTL1Q12841 308 aa24.37■■□□□ 1.49
FGFR3-209ENST00000507588 HSP90AB3PQ58FF7 597 aa24.37■■□□□ 1.49
FGFR3-209ENST00000507588 HDGFL1Q5TGJ6 251 aa24.37■■□□□ 1.49
FGFR3-209ENST00000507588 COPS6Q7L5N1 327 aa24.37■■□□□ 1.49
FGFR3-209ENST00000507588 XAGE3Q8WTP9 111 aa24.37■■□□□ 1.49
FGFR3-209ENST00000507588 MBIPQ9NS73 344 aa24.37■■□□□ 1.49
FGFR3-209ENST00000507588 CALD1Q05682 793 aaKnown RBP24.36■■□□□ 1.49
FGFR3-209ENST00000507588 IFT57Q9NWB7 429 aa24.36■■□□□ 1.49
FGFR3-209ENST00000507588 CHPF2Q9P2E5 772 aa24.36■■□□□ 1.49
FGFR3-209ENST00000507588 VEGFAP15692 232 aaPredicted RBP24.35■■□□□ 1.49
FGFR3-209ENST00000507588 APLP1P51693 650 aa24.35■■□□□ 1.49
FGFR3-209ENST00000507588 DPY19L2Q6NUT2 758 aa24.35■■□□□ 1.49
FGFR3-209ENST00000507588 RTKN2Q8IZC4 609 aa24.35■■□□□ 1.49
FGFR3-209ENST00000507588 RPGRQ92834 1020 aaKnown RBP24.34■■□□□ 1.49
FGFR3-209ENST00000507588 GNAI1P63096 354 aa24.33■■□□□ 1.49
FGFR3-209ENST00000507588 AIMP1Q12904 312 aaKnown RBP24.33■■□□□ 1.49
FGFR3-209ENST00000507588 OLFM4Q6UX06 510 aa24.33■■□□□ 1.49
FGFR3-209ENST00000507588 UTP14AQ9BVJ6 771 aaKnown RBP24.33■■□□□ 1.49
FGFR3-209ENST00000507588 DBF4Q9UBU7 674 aaPredicted RBP24.33■■□□□ 1.49
FGFR3-209ENST00000507588 TAF1P21675 1872 aa24.32■■□□□ 1.48
FGFR3-209ENST00000507588 TCIRG1Q13488 830 aa24.32■■□□□ 1.48
FGFR3-209ENST00000507588 SLC10A5Q5PT55 438 aa24.32■■□□□ 1.48
FGFR3-209ENST00000507588 DUSP27Q5VZP5 1158 aa24.32■■□□□ 1.48
FGFR3-209ENST00000507588 CC2D2BQ6DHV5 1058 aa24.32■■□□□ 1.48
FGFR3-209ENST00000507588 NLRP10Q86W26 655 aa24.32■■□□□ 1.48
FGFR3-209ENST00000507588 CRAMP1Q96RY5 1269 aa24.32■■□□□ 1.48
FGFR3-209ENST00000507588 LRRC37AA6NMS7 1700 aa24.32■■□□□ 1.48
FGFR3-209ENST00000507588 POTECB2RU33 542 aa24.31■■□□□ 1.48
FGFR3-209ENST00000507588 CCDC184Q52MB2 194 aa24.31■■□□□ 1.48
FGFR3-209ENST00000507588 SMC1BQ8NDV3 1235 aa24.31■■□□□ 1.48
FGFR3-209ENST00000507588 PSMD1Q99460 953 aa24.31■■□□□ 1.48
FGFR3-209ENST00000507588 C3orf67Q6ZVT6 689 aa24.3■■□□□ 1.48
FGFR3-209ENST00000507588 CACNA1FO60840 1977 aa24.3■■□□□ 1.48
FGFR3-209ENST00000507588 ZNF316A6NFI3 1004 aaPredicted RBP24.29■■□□□ 1.48
FGFR3-209ENST00000507588 PLBD2Q8NHP8 589 aa24.29■■□□□ 1.48
FGFR3-209ENST00000507588 RBM17Q96I25 401 aaKnown RBP24.29■■□□□ 1.48
FGFR3-209ENST00000507588 NLRP3Q96P20 1036 aa24.29■■□□□ 1.48
FGFR3-209ENST00000507588 ZNF277Q9NRM2 450 aaPredicted RBP24.29■■□□□ 1.48
FGFR3-209ENST00000507588 HYPKQ9NX55 129 aa24.29■■□□□ 1.48
FGFR3-209ENST00000507588 COL4A5P29400 1685 aa24.28■■□□□ 1.48
FGFR3-209ENST00000507588 GRIPAP1Q4V328 841 aa24.28■■□□□ 1.48
FGFR3-209ENST00000507588 ADAMTSL1Q8N6G6 1762 aa24.27■■□□□ 1.48
FGFR3-209ENST00000507588 IARSP41252 1262 aaKnown RBP24.27■■□□□ 1.48
FGFR3-209ENST00000507588 L3MBTL3Q96JM7 780 aaPredicted RBP24.27■■□□□ 1.48
FGFR3-209ENST00000507588 SH3TC1Q8TE82 1336 aa24.27■■□□□ 1.48
FGFR3-209ENST00000507588 PPEF1O14829 653 aaPredicted RBP24.26■■□□□ 1.47
FGFR3-209ENST00000507588 DDNO94850 711 aaPredicted RBP24.26■■□□□ 1.47
FGFR3-209ENST00000507588 CCDC27Q2M243 656 aa24.26■■□□□ 1.47
FGFR3-209ENST00000507588 ANKRD13DQ6ZTN6 518 aa24.26■■□□□ 1.47
FGFR3-209ENST00000507588 SYNE4Q8N205 404 aa24.25■■□□□ 1.47
FGFR3-209ENST00000507588 ISCA1Q9BUE6 129 aa24.25■■□□□ 1.47
FGFR3-209ENST00000507588 TRMT112Q9UI30 125 aaKnown RBP24.25■■□□□ 1.47
FGFR3-209ENST00000507588 ABCC4O15439 1325 aa24.25■■□□□ 1.47
FGFR3-209ENST00000507588 ZNF541Q9H0D2 1346 aa24.24■■□□□ 1.47
FGFR3-209ENST00000507588 MYH3P11055 1940 aa24.23■■□□□ 1.47
FGFR3-209ENST00000507588 FZD9O00144 591 aa24.23■■□□□ 1.47
FGFR3-209ENST00000507588 NCBP3Q53F19 620 aaKnown RBP24.23■■□□□ 1.47
FGFR3-209ENST00000507588 ANP32CO43423 234 aa24.22■■□□□ 1.47
FGFR3-209ENST00000507588 DNAJC5GQ8N7S2 189 aa24.22■■□□□ 1.47
FGFR3-209ENST00000507588 IQCA1LA6NCM1 817 aa24.21■■□□□ 1.47
FGFR3-209ENST00000507588 HCLS1P14317 486 aaPredicted RBP24.21■■□□□ 1.47
FGFR3-209ENST00000507588 SLC51AQ86UW1 340 aa24.21■■□□□ 1.47
FGFR3-209ENST00000507588 C8orf58Q8NAV2 365 aa24.21■■□□□ 1.47
FGFR3-209ENST00000507588 MRS2Q9HD23 443 aa24.21■■□□□ 1.47
FGFR3-209ENST00000507588 ATP6V0A2Q9Y487 856 aa24.21■■□□□ 1.47
FGFR3-209ENST00000507588 LTBP1Q14766 1721 aa24.21■■□□□ 1.47
FGFR3-209ENST00000507588 DUOX1Q9NRD9 1551 aa24.2■■□□□ 1.47
FGFR3-209ENST00000507588 TRIM28Q13263 835 aaKnown RBP24.2■■□□□ 1.46
FGFR3-209ENST00000507588 CHMP4AQ9BY43 222 aa24.2■■□□□ 1.46
FGFR3-209ENST00000507588 GOLGA2Q08379 1002 aa24.19■■□□□ 1.46
FGFR3-209ENST00000507588 WWC1Q8IX03 1113 aa24.19■■□□□ 1.46
FGFR3-209ENST00000507588 JDP2Q8WYK2 163 aa24.19■■□□□ 1.46
FGFR3-209ENST00000507588 IL16Q14005 1332 aa24.18■■□□□ 1.46
FGFR3-209ENST00000507588 ELL2O00472 640 aaPredicted RBP24.18■■□□□ 1.46
FGFR3-209ENST00000507588 PHAXQ9H814 394 aaKnown RBP24.18■■□□□ 1.46
FGFR3-209ENST00000507588 COL4A1P02462 1669 aa24.18■■□□□ 1.46
FGFR3-209ENST00000507588 ATP5J2-PTCD1G3V325 749 aa24.17■■□□□ 1.46
FGFR3-209ENST00000507588 BBOX1O75936 387 aa24.17■■□□□ 1.46
FGFR3-209ENST00000507588 GRAPQ13588 217 aa24.17■■□□□ 1.46
FGFR3-209ENST00000507588 CCDC30Q5VVM6 783 aa24.17■■□□□ 1.46
FGFR3-209ENST00000507588 DDX46Q7L014 1031 aaKnown RBP24.17■■□□□ 1.46
FGFR3-209ENST00000507588 GPC2Q8N158 579 aa24.17■■□□□ 1.46
FGFR3-209ENST00000507588 GRAPLQ8TC17 118 aaPredicted RBP24.17■■□□□ 1.46
FGFR3-209ENST00000507588 PCNTO95613 3336 aa24.17■■□□□ 1.46
FGFR3-209ENST00000507588 RIC3Q7Z5B4 369 aa24.16■■□□□ 1.46
FGFR3-209ENST00000507588 TMX4Q9H1E5 349 aaPredicted RBP24.16■■□□□ 1.46
FGFR3-209ENST00000507588 VPS33BQ9H267 617 aa24.16■■□□□ 1.46
FGFR3-209ENST00000507588 TAF1DQ9H5J8 278 aaPredicted RBP24.16■■□□□ 1.46
FGFR3-209ENST00000507588 TCERG1O14776 1098 aaKnown RBP24.15■■□□□ 1.46
FGFR3-209ENST00000507588 POTEIP0CG38 1075 aa24.15■■□□□ 1.46
FGFR3-209ENST00000507588 POTEJP0CG39 1038 aa24.15■■□□□ 1.46
FGFR3-209ENST00000507588 HTRA3P83110 453 aa24.15■■□□□ 1.46
FGFR3-209ENST00000507588 CHADLQ6NUI6 762 aa24.15■■□□□ 1.46
FGFR3-209ENST00000507588 SP8Q8IXZ3 490 aa24.15■■□□□ 1.46
FGFR3-209ENST00000507588 LARGE2Q8N3Y3 721 aa24.15■■□□□ 1.46
FGFR3-209ENST00000507588 TSPYL6Q8N831 410 aa24.15■■□□□ 1.46
FGFR3-209ENST00000507588 TSR2Q969E8 191 aaKnown RBP24.15■■□□□ 1.46
FGFR3-209ENST00000507588 FAM89AQ96GI7 184 aa24.15■■□□□ 1.46
FGFR3-209ENST00000507588 RTFDC1Q9BY42 306 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms