RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 CANXP27824 592 aaKnown RBP12.18□□□□□ -0.46
RPS3A-206ENST00000507485 ZNF496Q96IT1 587 aaPredicted RBP12.18□□□□□ -0.46
RPS3A-206ENST00000507485 RNF181Q9P0P0 153 aa12.18□□□□□ -0.46
RPS3A-206ENST00000507485 SCN7AQ01118 1682 aa12.17□□□□□ -0.46
RPS3A-206ENST00000507485 EIF5P55010 431 aaKnown RBP12.17□□□□□ -0.46
RPS3A-206ENST00000507485 HTRA3P83110 453 aa12.17□□□□□ -0.46
RPS3A-206ENST00000507485 IFFO2Q5TF58 517 aa12.17□□□□□ -0.46
RPS3A-206ENST00000507485 VSIG10Q8N0Z9 540 aa12.17□□□□□ -0.46
RPS3A-206ENST00000507485 DNAJC5GQ8N7S2 189 aa12.17□□□□□ -0.46
RPS3A-206ENST00000507485 NPC1L1Q9UHC9 1359 aa12.17□□□□□ -0.46
RPS3A-206ENST00000507485 COL11A2P13942 1736 aaPredicted RBP12.17□□□□□ -0.46
RPS3A-206ENST00000507485 KCNQ3O43525 872 aa12.16□□□□□ -0.46
RPS3A-206ENST00000507485 SERPINB2P05120 415 aa12.16□□□□□ -0.46
RPS3A-206ENST00000507485 PHACTR3Q96KR7 559 aa12.16□□□□□ -0.46
RPS3A-206ENST00000507485 WDR90Q96KV7 1748 aa12.16□□□□□ -0.46
RPS3A-206ENST00000507485 U2SURPO15042 1029 aaKnown RBP12.16□□□□□ -0.46
RPS3A-206ENST00000507485 HEG1Q9ULI3 1381 aa12.16□□□□□ -0.46
RPS3A-206ENST00000507485 CEMIPQ8WUJ3 1361 aa12.15□□□□□ -0.46
RPS3A-206ENST00000507485 TBC1D9BQ66K14 1250 aa12.15□□□□□ -0.46
RPS3A-206ENST00000507485 BICDL1Q6ZP65 573 aa12.15□□□□□ -0.46
RPS3A-206ENST00000507485 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
RPS3A-206ENST00000507485 TNRC6CQ9HCJ0 1690 aaKnown RBP12.14□□□□□ -0.47
RPS3A-206ENST00000507485 GNAT3A8MTJ3 354 aa12.14□□□□□ -0.47
RPS3A-206ENST00000507485 APLP1P51693 650 aa12.14□□□□□ -0.47
RPS3A-206ENST00000507485 ZNF790Q6PG37 636 aa12.14□□□□□ -0.47
RPS3A-206ENST00000507485 RRAGCQ9HB90 399 aa12.14□□□□□ -0.47
RPS3A-206ENST00000507485 CCDC88AQ3V6T2 1871 aa12.14□□□□□ -0.47
RPS3A-206ENST00000507485 TIAM2Q8IVF5 1701 aa12.14□□□□□ -0.47
RPS3A-206ENST00000507485 PRAMEF22A3QJZ6 481 aa12.13□□□□□ -0.47
RPS3A-206ENST00000507485 NFKBIEO00221 500 aa12.13□□□□□ -0.47
RPS3A-206ENST00000507485 A1BGP04217 495 aa12.13□□□□□ -0.47
RPS3A-206ENST00000507485 C2CD5Q86YS7 1000 aa12.13□□□□□ -0.47
RPS3A-206ENST00000507485 RBM46Q8TBY0 533 aaKnown RBP12.13□□□□□ -0.47
RPS3A-206ENST00000507485 RSPH6AQ9H0K4 717 aa12.13□□□□□ -0.47
RPS3A-206ENST00000507485 TBC1D2BQ9UPU7 963 aa12.13□□□□□ -0.47
RPS3A-206ENST00000507485 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
RPS3A-206ENST00000507485 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
RPS3A-206ENST00000507485 PIP4K2AP48426 406 aaPredicted RBP12.12□□□□□ -0.47
RPS3A-206ENST00000507485 TTC5Q8N0Z6 440 aa12.12□□□□□ -0.47
RPS3A-206ENST00000507485 PTCD2Q8WV60 388 aaKnown RBP12.12□□□□□ -0.47
RPS3A-206ENST00000507485 HRO43593 1189 aa12.11□□□□□ -0.47
RPS3A-206ENST00000507485 TEFQ10587 303 aa12.11□□□□□ -0.47
RPS3A-206ENST00000507485 PRR5LQ6MZQ0 368 aa12.11□□□□□ -0.47
RPS3A-206ENST00000507485 TTLL6Q8N841 843 aa12.11□□□□□ -0.47
RPS3A-206ENST00000507485 GAS2L2Q8NHY3 880 aa12.11□□□□□ -0.47
RPS3A-206ENST00000507485 RGL2O15211 777 aa12.11□□□□□ -0.47
RPS3A-206ENST00000507485 CAMTA2O94983 1202 aa12.11□□□□□ -0.47
RPS3A-206ENST00000507485 STARD3NLO95772 234 aa12.11□□□□□ -0.47
RPS3A-206ENST00000507485 ZNF330Q9Y3S2 320 aaPredicted RBP12.11□□□□□ -0.47
RPS3A-206ENST00000507485 USP16Q9Y5T5 823 aa12.11□□□□□ -0.47
RPS3A-206ENST00000507485 KDM2BQ8NHM5 1336 aa12.1□□□□□ -0.47
RPS3A-206ENST00000507485 FER1L6Q2WGJ9 1857 aa12.1□□□□□ -0.47
RPS3A-206ENST00000507485 POTECB2RU33 542 aa12.1□□□□□ -0.47
RPS3A-206ENST00000507485 IL6STP40189 918 aaPredicted RBP12.1□□□□□ -0.47
RPS3A-206ENST00000507485 SLX4Q8IY92 1834 aa12.1□□□□□ -0.47
RPS3A-206ENST00000507485 CACNA1SQ13698 1873 aa12.09□□□□□ -0.47
RPS3A-206ENST00000507485 A0A087WZG4 1122 aa12.09□□□□□ -0.47
RPS3A-206ENST00000507485 PPP1R37O75864 691 aa12.09□□□□□ -0.47
RPS3A-206ENST00000507485 LMNB1P20700 586 aa12.09□□□□□ -0.47
RPS3A-206ENST00000507485 DCTN1Q14203 1278 aa12.09□□□□□ -0.47
RPS3A-206ENST00000507485 MCM10Q7L590 875 aa12.09□□□□□ -0.47
RPS3A-206ENST00000507485 FMNL2Q96PY5 1086 aa12.09□□□□□ -0.47
RPS3A-206ENST00000507485 GLTPD2A6NH11 291 aa12.08□□□□□ -0.48
RPS3A-206ENST00000507485 BTBD11A6QL63 1104 aa12.08□□□□□ -0.48
RPS3A-206ENST00000507485 H0YIN7 160 aa12.08□□□□□ -0.48
RPS3A-206ENST00000507485 C21orf2O43822 256 aa12.08□□□□□ -0.48
RPS3A-206ENST00000507485 PPP2R1AP30153 589 aa12.08□□□□□ -0.48
RPS3A-206ENST00000507485 FSTL1Q12841 308 aa12.08□□□□□ -0.48
RPS3A-206ENST00000507485 PPP4R3BQ5MIZ7 849 aa12.08□□□□□ -0.48
RPS3A-206ENST00000507485 TBC1D12O60347 775 aa12.07□□□□□ -0.48
RPS3A-206ENST00000507485 C16orf71Q8IYS4 520 aaPredicted RBP12.07□□□□□ -0.48
RPS3A-206ENST00000507485 ZNF622Q969S3 477 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPS3A-206ENST00000507485 BRIP1Q9BX63 1249 aa12.07□□□□□ -0.48
RPS3A-206ENST00000507485 TEX13AQ9BXU3 409 aaPredicted RBP12.07□□□□□ -0.48
RPS3A-206ENST00000507485 DICER1Q9UPY3 1922 aaKnown RBP12.07□□□□□ -0.48
RPS3A-206ENST00000507485 ZC3H4Q9UPT8 1303 aaKnown RBP12.07□□□□□ -0.48
RPS3A-206ENST00000507485 ARFGEF2Q9Y6D5 1785 aa12.07□□□□□ -0.48
RPS3A-206ENST00000507485 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
RPS3A-206ENST00000507485 NBPF10Q6P3W6 841 aaKnown RBP12.06□□□□□ -0.48
RPS3A-206ENST00000507485 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
RPS3A-206ENST00000507485 NBPF15Q8N660 670 aa12.06□□□□□ -0.48
RPS3A-206ENST00000507485 KLRG1Q96E93 195 aa12.06□□□□□ -0.48
RPS3A-206ENST00000507485 U2AF1L5P0DN76 240 aaPredicted RBP12.06□□□□□ -0.48
RPS3A-206ENST00000507485 FOXK1P85037 733 aa12.06□□□□□ -0.48
RPS3A-206ENST00000507485 U2AF1Q01081 240 aaKnown RBP eCLIP12.06□□□□□ -0.48
RPS3A-206ENST00000507485 DMRTA1Q5VZB9 504 aa12.06□□□□□ -0.48
RPS3A-206ENST00000507485 JMYQ8N9B5 988 aa12.06□□□□□ -0.48
RPS3A-206ENST00000507485 SRGNP10124 158 aa12.05□□□□□ -0.48
RPS3A-206ENST00000507485 PDE6BP35913 854 aa12.05□□□□□ -0.48
RPS3A-206ENST00000507485 PSEN2P49810 448 aa12.05□□□□□ -0.48
RPS3A-206ENST00000507485 PLPP6Q8IY26 295 aa12.05□□□□□ -0.48
RPS3A-206ENST00000507485 CNBD1Q8NA66 436 aa12.05□□□□□ -0.48
RPS3A-206ENST00000507485 DLG5Q8TDM6 1919 aa12.04□□□□□ -0.48
RPS3A-206ENST00000507485 VEGFAP15692 232 aaPredicted RBP12.04□□□□□ -0.48
RPS3A-206ENST00000507485 SMC1BQ8NDV3 1235 aa12.04□□□□□ -0.48
RPS3A-206ENST00000507485 CFAP53Q96M91 514 aa12.04□□□□□ -0.48
RPS3A-206ENST00000507485 SETDB2Q96T68 719 aa12.04□□□□□ -0.48
RPS3A-206ENST00000507485 MIS18AQ9NYP9 233 aa12.04□□□□□ -0.48
RPS3A-206ENST00000507485 PRPF40BQ6NWY9 871 aaKnown RBP12.03□□□□□ -0.48
RPS3A-206ENST00000507485 OLFM4Q6UX06 510 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms