RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 NLRP10Q86W26 655 aa24.77■■□□□ 1.56
LMNA-221ENST00000506981 ABCC12Q96J65 1359 aa24.77■■□□□ 1.56
LMNA-221ENST00000506981 SLFN5Q08AF3 891 aa24.76■■□□□ 1.55
LMNA-221ENST00000506981 SLX4Q8IY92 1834 aa24.76■■□□□ 1.55
LMNA-221ENST00000506981 STYK1Q6J9G0 422 aa24.75■■□□□ 1.55
LMNA-221ENST00000506981 CNKSR1Q969H4 720 aa24.75■■□□□ 1.55
LMNA-221ENST00000506981 MASTLQ96GX5 879 aa24.75■■□□□ 1.55
LMNA-221ENST00000506981 DDX60Q8IY21 1712 aaKnown RBP24.75■■□□□ 1.55
LMNA-221ENST00000506981 CCDC88AQ3V6T2 1871 aa24.75■■□□□ 1.55
LMNA-221ENST00000506981 ATP5J2-PTCD1G3V325 749 aa24.74■■□□□ 1.55
LMNA-221ENST00000506981 SRGNP10124 158 aa24.74■■□□□ 1.55
LMNA-221ENST00000506981 TRMT112Q9UI30 125 aaKnown RBP24.74■■□□□ 1.55
LMNA-221ENST00000506981 NPR1P16066 1061 aa24.73■■□□□ 1.55
LMNA-221ENST00000506981 HNRNPUQ00839 825 aaKnown RBP eCLIP24.73■■□□□ 1.55
LMNA-221ENST00000506981 ARHGAP27Q6ZUM4 889 aa24.73■■□□□ 1.55
LMNA-221ENST00000506981 MYD88Q99836 296 aa24.73■■□□□ 1.55
LMNA-221ENST00000506981 ISCA1Q9BUE6 129 aa24.73■■□□□ 1.55
LMNA-221ENST00000506981 SBF1O95248 1867 aa24.72■■□□□ 1.55
LMNA-221ENST00000506981 SH3TC1Q8TE82 1336 aa24.72■■□□□ 1.55
LMNA-221ENST00000506981 FLIIQ13045 1269 aa24.72■■□□□ 1.55
LMNA-221ENST00000506981 FKBP5Q13451 457 aaPredicted RBP24.72■■□□□ 1.55
LMNA-221ENST00000506981 KSR2Q6VAB6 950 aa24.72■■□□□ 1.55
LMNA-221ENST00000506981 CDCA7LQ96GN5 454 aa24.72■■□□□ 1.55
LMNA-221ENST00000506981 MAP3K2Q9Y2U5 619 aa24.72■■□□□ 1.55
LMNA-221ENST00000506981 KLRG2A4D1S0 409 aaPredicted RBP24.71■■□□□ 1.55
LMNA-221ENST00000506981 NEXNQ0ZGT2 675 aa24.71■■□□□ 1.55
LMNA-221ENST00000506981 G2E3Q7L622 706 aa24.71■■□□□ 1.55
LMNA-221ENST00000506981 RPGRQ92834 1020 aaKnown RBP24.71■■□□□ 1.55
LMNA-221ENST00000506981 METTL22Q9BUU2 404 aaPredicted RBP24.71■■□□□ 1.55
LMNA-221ENST00000506981 FER1L6Q2WGJ9 1857 aa24.7■■□□□ 1.55
LMNA-221ENST00000506981 PI4KAP2A4QPH2 592 aa24.7■■□□□ 1.54
LMNA-221ENST00000506981 TRIM28Q13263 835 aaKnown RBP24.7■■□□□ 1.54
LMNA-221ENST00000506981 PI4KAP1Q8N8J0 262 aa24.7■■□□□ 1.54
LMNA-221ENST00000506981 NLRP3Q96P20 1036 aa24.7■■□□□ 1.54
LMNA-221ENST00000506981 MYH3P11055 1940 aa24.7■■□□□ 1.54
LMNA-221ENST00000506981 GOLGB1Q14789 3259 aaKnown RBP24.7■■□□□ 1.54
LMNA-221ENST00000506981 ADCY9O60503 1353 aa24.69■■□□□ 1.54
LMNA-221ENST00000506981 PRPF40BQ6NWY9 871 aaKnown RBP24.68■■□□□ 1.54
LMNA-221ENST00000506981 ALDH1B1P30837 517 aa24.67■■□□□ 1.54
LMNA-221ENST00000506981 CRY2Q49AN0 593 aa24.67■■□□□ 1.54
LMNA-221ENST00000506981 SLC10A5Q5PT55 438 aa24.67■■□□□ 1.54
LMNA-221ENST00000506981 CCDC191Q8NCU4 936 aa24.67■■□□□ 1.54
LMNA-221ENST00000506981 ZNF428Q96B54 188 aa24.67■■□□□ 1.54
LMNA-221ENST00000506981 CWC25Q9NXE8 425 aaPredicted RBP24.67■■□□□ 1.54
LMNA-221ENST00000506981 ZNF219Q9P2Y4 722 aaPredicted RBP24.66■■□□□ 1.54
LMNA-221ENST00000506981 HSP90B1P14625 803 aaKnown RBP24.65■■□□□ 1.54
LMNA-221ENST00000506981 SOGA3Q5TF21 947 aa24.65■■□□□ 1.54
LMNA-221ENST00000506981 TRMT2AQ8IZ69 625 aaKnown RBP24.65■■□□□ 1.54
LMNA-221ENST00000506981 RBM17Q96I25 401 aaKnown RBP24.65■■□□□ 1.54
LMNA-221ENST00000506981 C21orf2O43822 256 aa24.64■■□□□ 1.54
LMNA-221ENST00000506981 HCLS1P14317 486 aaPredicted RBP24.64■■□□□ 1.54
LMNA-221ENST00000506981 DNAAF4Q8WXU2 420 aa24.64■■□□□ 1.54
LMNA-221ENST00000506981 FAM89AQ96GI7 184 aa24.64■■□□□ 1.54
LMNA-221ENST00000506981 DICER1Q9UPY3 1922 aaKnown RBP24.64■■□□□ 1.53
LMNA-221ENST00000506981 TAF1P21675 1872 aa24.64■■□□□ 1.53
LMNA-221ENST00000506981 CT47B1P0C2W7 299 aaPredicted RBP24.63■■□□□ 1.53
LMNA-221ENST00000506981 RTL5Q5HYW3 569 aaPredicted RBP24.63■■□□□ 1.53
LMNA-221ENST00000506981 SYNE4Q8N205 404 aa24.63■■□□□ 1.53
LMNA-221ENST00000506981 ZBTB38Q8NAP3 1195 aaPredicted RBP24.63■■□□□ 1.53
LMNA-221ENST00000506981 UTRNP46939 3433 aa24.61■■□□□ 1.53
LMNA-221ENST00000506981 TIAM2Q8IVF5 1701 aa24.61■■□□□ 1.53
LMNA-221ENST00000506981 IRS4O14654 1257 aaPredicted RBP24.61■■□□□ 1.53
LMNA-221ENST00000506981 PCCAP05165 728 aaPredicted RBP24.61■■□□□ 1.53
LMNA-221ENST00000506981 HOXA10P31260 410 aaPredicted RBP24.61■■□□□ 1.53
LMNA-221ENST00000506981 C3orf67Q6ZVT6 689 aa24.61■■□□□ 1.53
LMNA-221ENST00000506981 CRAMP1Q96RY5 1269 aa24.6■■□□□ 1.53
LMNA-221ENST00000506981 NEURL1BA8MQ27 555 aa24.59■■□□□ 1.53
LMNA-221ENST00000506981 IGKV5-2P06315 115 aa24.59■■□□□ 1.53
LMNA-221ENST00000506981 RASSF7Q02833 373 aa24.59■■□□□ 1.53
LMNA-221ENST00000506981 CWF19L2Q2TBE0 894 aaKnown RBP24.59■■□□□ 1.53
LMNA-221ENST00000506981 ALDH1L2Q3SY69 923 aa24.59■■□□□ 1.53
LMNA-221ENST00000506981 CCDC93Q567U6 631 aa24.59■■□□□ 1.53
LMNA-221ENST00000506981 ZBED9Q6R2W3 1325 aa24.59■■□□□ 1.53
LMNA-221ENST00000506981 DDX46Q7L014 1031 aaKnown RBP24.58■■□□□ 1.53
LMNA-221ENST00000506981 MRPL50Q8N5N7 158 aaKnown RBP24.58■■□□□ 1.53
LMNA-221ENST00000506981 LINS1Q8NG48 757 aa24.58■■□□□ 1.53
LMNA-221ENST00000506981 SSH1Q8WYL5 1049 aa24.58■■□□□ 1.53
LMNA-221ENST00000506981 TMX4Q9H1E5 349 aaPredicted RBP24.58■■□□□ 1.53
LMNA-221ENST00000506981 SMC4Q9NTJ3 1288 aa24.58■■□□□ 1.53
LMNA-221ENST00000506981 F6X3S4 739 aa24.57■■□□□ 1.52
LMNA-221ENST00000506981 RNF181Q9P0P0 153 aa24.57■■□□□ 1.52
LMNA-221ENST00000506981 PPEF1O14829 653 aaPredicted RBP24.56■■□□□ 1.52
LMNA-221ENST00000506981 C9orf131Q5VYM1 1079 aa24.56■■□□□ 1.52
LMNA-221ENST00000506981 BCL2L13Q9BXK5 485 aa24.56■■□□□ 1.52
LMNA-221ENST00000506981 TAOK3Q9H2K8 898 aa24.56■■□□□ 1.52
LMNA-221ENST00000506981 ABCC4O15439 1325 aa24.56■■□□□ 1.52
LMNA-221ENST00000506981 PTPRCP08575 1304 aa24.56■■□□□ 1.52
LMNA-221ENST00000506981 CDHR2Q9BYE9 1310 aa24.56■■□□□ 1.52
LMNA-221ENST00000506981 NFKBIEO00221 500 aa24.55■■□□□ 1.52
LMNA-221ENST00000506981 LMNB1P20700 586 aa24.55■■□□□ 1.52
LMNA-221ENST00000506981 CC2D2BQ6DHV5 1058 aa24.55■■□□□ 1.52
LMNA-221ENST00000506981 SPEF2Q9C093 1822 aa24.54■■□□□ 1.52
LMNA-221ENST00000506981 PDE8AO60658 829 aa24.54■■□□□ 1.52
LMNA-221ENST00000506981 GCKRQ14397 625 aa24.54■■□□□ 1.52
LMNA-221ENST00000506981 SF3B3Q15393 1217 aaKnown RBP24.54■■□□□ 1.52
LMNA-221ENST00000506981 SLC4A10Q6U841 1118 aa24.54■■□□□ 1.52
LMNA-221ENST00000506981 RTKN2Q8IZC4 609 aa24.54■■□□□ 1.52
LMNA-221ENST00000506981 C7orf43Q8WVR3 580 aa24.54■■□□□ 1.52
LMNA-221ENST00000506981 JARID2Q92833 1246 aaPredicted RBP24.54■■□□□ 1.52
LMNA-221ENST00000506981 LTBP3Q9NS15 1303 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms