RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 PARP10Q53GL7 1025 aa29.05■■■□□ 2.24
SUDS3P1-201ENST00000505831 KRT24Q2M2I5 525 aa29.04■■■□□ 2.24
SUDS3P1-201ENST00000505831 SLC10A5Q5PT55 438 aa29.04■■■□□ 2.24
SUDS3P1-201ENST00000505831 ZNF277Q9NRM2 450 aaPredicted RBP29.04■■■□□ 2.24
SUDS3P1-201ENST00000505831 PPP1R42Q7Z4L9 355 aa29.03■■■□□ 2.24
SUDS3P1-201ENST00000505831 DDX21Q9NR30 783 aaKnown RBP eCLIP29.03■■■□□ 2.24
SUDS3P1-201ENST00000505831 COPS6Q7L5N1 327 aa29.02■■■□□ 2.24
SUDS3P1-201ENST00000505831 CRAMP1Q96RY5 1269 aa29.02■■■□□ 2.24
SUDS3P1-201ENST00000505831 TAF1P21675 1872 aa29.02■■■□□ 2.24
SUDS3P1-201ENST00000505831 CC2D2BQ6DHV5 1058 aa29.01■■■□□ 2.23
SUDS3P1-201ENST00000505831 C3orf67Q6ZVT6 689 aa29.01■■■□□ 2.23
SUDS3P1-201ENST00000505831 SYNE4Q8N205 404 aa29.01■■■□□ 2.23
SUDS3P1-201ENST00000505831 KLRG1Q96E93 195 aa29.01■■■□□ 2.23
SUDS3P1-201ENST00000505831 L3MBTL3Q96JM7 780 aaPredicted RBP29.01■■■□□ 2.23
SUDS3P1-201ENST00000505831 PSMD1Q99460 953 aa29.01■■■□□ 2.23
SUDS3P1-201ENST00000505831 NECTIN2Q92692 538 aa29■■■□□ 2.23
SUDS3P1-201ENST00000505831 RPGRQ92834 1020 aaKnown RBP29■■■□□ 2.23
SUDS3P1-201ENST00000505831 XAGE3Q8WTP9 111 aa28.99■■■□□ 2.23
SUDS3P1-201ENST00000505831 IARSP41252 1262 aaKnown RBP28.98■■■□□ 2.23
SUDS3P1-201ENST00000505831 JMYQ8N9B5 988 aa28.98■■■□□ 2.23
SUDS3P1-201ENST00000505831 CFAP44Q96MT7 982 aa28.98■■■□□ 2.23
SUDS3P1-201ENST00000505831 UTP14AQ9BVJ6 771 aaKnown RBP28.98■■■□□ 2.23
SUDS3P1-201ENST00000505831 LAS1LQ9Y4W2 734 aaKnown RBP28.98■■■□□ 2.23
SUDS3P1-201ENST00000505831 FZD9O00144 591 aa28.97■■■□□ 2.23
SUDS3P1-201ENST00000505831 HOXB7P09629 217 aa28.97■■■□□ 2.23
SUDS3P1-201ENST00000505831 RBM17Q96I25 401 aaKnown RBP28.97■■■□□ 2.23
SUDS3P1-201ENST00000505831 RNF123Q5XPI4 1314 aa28.96■■■□□ 2.23
SUDS3P1-201ENST00000505831 ZNF541Q9H0D2 1346 aa28.96■■■□□ 2.23
SUDS3P1-201ENST00000505831 ZNF853P0CG23 659 aa28.96■■■□□ 2.23
SUDS3P1-201ENST00000505831 AIMP1Q12904 312 aaKnown RBP28.96■■■□□ 2.23
SUDS3P1-201ENST00000505831 TCIRG1Q13488 830 aa28.96■■■□□ 2.23
SUDS3P1-201ENST00000505831 GRIPAP1Q4V328 841 aa28.96■■■□□ 2.23
SUDS3P1-201ENST00000505831 HSP90AB3PQ58FF7 597 aa28.96■■■□□ 2.23
SUDS3P1-201ENST00000505831 NLRP10Q86W26 655 aa28.96■■■□□ 2.23
SUDS3P1-201ENST00000505831 NLRP3Q96P20 1036 aa28.96■■■□□ 2.23
SUDS3P1-201ENST00000505831 COL4A5P29400 1685 aa28.96■■■□□ 2.23
SUDS3P1-201ENST00000505831 POTEIP0CG38 1075 aa28.95■■■□□ 2.22
SUDS3P1-201ENST00000505831 POTEJP0CG39 1038 aa28.95■■■□□ 2.22
SUDS3P1-201ENST00000505831 CHPF2Q9P2E5 772 aa28.95■■■□□ 2.22
SUDS3P1-201ENST00000505831 DDX60Q8IY21 1712 aaKnown RBP28.94■■■□□ 2.22
SUDS3P1-201ENST00000505831 CHADLQ6NUI6 762 aa28.94■■■□□ 2.22
SUDS3P1-201ENST00000505831 ADAMTSL1Q8N6G6 1762 aa28.93■■■□□ 2.22
SUDS3P1-201ENST00000505831 IQCA1LA6NCM1 817 aa28.93■■■□□ 2.22
SUDS3P1-201ENST00000505831 TAF1DQ9H5J8 278 aaPredicted RBP28.93■■■□□ 2.22
SUDS3P1-201ENST00000505831 APAF1O14727 1248 aa28.92■■■□□ 2.22
SUDS3P1-201ENST00000505831 SLC51AQ86UW1 340 aa28.92■■■□□ 2.22
SUDS3P1-201ENST00000505831 MBIPQ9NS73 344 aa28.92■■■□□ 2.22
SUDS3P1-201ENST00000505831 HDGFL1Q5TGJ6 251 aa28.91■■■□□ 2.22
SUDS3P1-201ENST00000505831 DBF4Q9UBU7 674 aaPredicted RBP28.91■■■□□ 2.22
SUDS3P1-201ENST00000505831 PPEF1O14829 653 aaPredicted RBP28.9■■■□□ 2.22
SUDS3P1-201ENST00000505831 IFFO2Q5TF58 517 aa28.9■■■□□ 2.22
SUDS3P1-201ENST00000505831 PLBD2Q8NHP8 589 aa28.9■■■□□ 2.22
SUDS3P1-201ENST00000505831 DUSP27Q5VZP5 1158 aa28.89■■■□□ 2.22
SUDS3P1-201ENST00000505831 ATP6V0A2Q9Y487 856 aa28.89■■■□□ 2.22
SUDS3P1-201ENST00000505831 ANKRD13DQ6ZTN6 518 aa28.88■■■□□ 2.21
SUDS3P1-201ENST00000505831 GPC2Q8N158 579 aa28.88■■■□□ 2.21
SUDS3P1-201ENST00000505831 JDP2Q8WYK2 163 aa28.88■■■□□ 2.21
SUDS3P1-201ENST00000505831 ABCC4O15439 1325 aa28.88■■■□□ 2.21
SUDS3P1-201ENST00000505831 HCLS1P14317 486 aaPredicted RBP28.87■■■□□ 2.21
SUDS3P1-201ENST00000505831 LDHDQ86WU2 507 aa28.87■■■□□ 2.21
SUDS3P1-201ENST00000505831 ISCA1Q9BUE6 129 aa28.87■■■□□ 2.21
SUDS3P1-201ENST00000505831 TRMT112Q9UI30 125 aaKnown RBP28.87■■■□□ 2.21
SUDS3P1-201ENST00000505831 SH3TC1Q8TE82 1336 aa28.87■■■□□ 2.21
SUDS3P1-201ENST00000505831 TCERG1O14776 1098 aaKnown RBP28.86■■■□□ 2.21
SUDS3P1-201ENST00000505831 IFT57Q9NWB7 429 aa28.86■■■□□ 2.21
SUDS3P1-201ENST00000505831 HYPKQ9NX55 129 aa28.86■■■□□ 2.21
SUDS3P1-201ENST00000505831 HACL1Q9UJ83 578 aa28.86■■■□□ 2.21
SUDS3P1-201ENST00000505831 LTBP1Q14766 1721 aa28.86■■■□□ 2.21
SUDS3P1-201ENST00000505831 BBOX1O75936 387 aa28.85■■■□□ 2.21
SUDS3P1-201ENST00000505831 VPS33BQ9H267 617 aa28.84■■■□□ 2.21
SUDS3P1-201ENST00000505831 PASKQ96RG2 1323 aa28.84■■■□□ 2.21
SUDS3P1-201ENST00000505831 LRRC37AA6NMS7 1700 aa28.83■■■□□ 2.21
SUDS3P1-201ENST00000505831 ITGBL1O95965 494 aaPredicted RBP28.83■■■□□ 2.21
SUDS3P1-201ENST00000505831 EPHX2P34913 555 aa28.83■■■□□ 2.21
SUDS3P1-201ENST00000505831 GNAI1P63096 354 aa28.83■■■□□ 2.21
SUDS3P1-201ENST00000505831 SP8Q8IXZ3 490 aa28.83■■■□□ 2.21
SUDS3P1-201ENST00000505831 LARGE2Q8N3Y3 721 aa28.83■■■□□ 2.21
SUDS3P1-201ENST00000505831 RTFDC1Q9BY42 306 aaPredicted RBP28.83■■■□□ 2.21
SUDS3P1-201ENST00000505831 CALD1Q05682 793 aaKnown RBP28.82■■■□□ 2.2
SUDS3P1-201ENST00000505831 TRIM28Q13263 835 aaKnown RBP28.82■■■□□ 2.2
SUDS3P1-201ENST00000505831 CCDC184Q52MB2 194 aa28.82■■■□□ 2.2
SUDS3P1-201ENST00000505831 EIF6P56537 245 aaKnown RBP28.81■■■□□ 2.2
SUDS3P1-201ENST00000505831 CREBZFQ9NS37 354 aa28.81■■■□□ 2.2
SUDS3P1-201ENST00000505831 PNMA8AQ86V59 439 aaPredicted RBP28.8■■■□□ 2.2
SUDS3P1-201ENST00000505831 TMX4Q9H1E5 349 aaPredicted RBP28.79■■■□□ 2.2
SUDS3P1-201ENST00000505831 ATP5J2-PTCD1G3V325 749 aa28.78■■■□□ 2.2
SUDS3P1-201ENST00000505831 GRAPQ13588 217 aa28.78■■■□□ 2.2
SUDS3P1-201ENST00000505831 DDX46Q7L014 1031 aaKnown RBP28.78■■■□□ 2.2
SUDS3P1-201ENST00000505831 C8orf58Q8NAV2 365 aa28.78■■■□□ 2.2
SUDS3P1-201ENST00000505831 GRAPLQ8TC17 118 aaPredicted RBP28.78■■■□□ 2.2
SUDS3P1-201ENST00000505831 FAM89AQ96GI7 184 aa28.78■■■□□ 2.2
SUDS3P1-201ENST00000505831 CACNA1FO60840 1977 aa28.77■■■□□ 2.2
SUDS3P1-201ENST00000505831 SF3B3Q15393 1217 aaKnown RBP28.77■■■□□ 2.2
SUDS3P1-201ENST00000505831 EAPPQ56P03 285 aaPredicted RBP28.77■■■□□ 2.2
SUDS3P1-201ENST00000505831 ZNF428Q96B54 188 aa28.77■■■□□ 2.2
SUDS3P1-201ENST00000505831 PHAXQ9H814 394 aaKnown RBP28.77■■■□□ 2.2
SUDS3P1-201ENST00000505831 GJA3Q9Y6H8 435 aa28.77■■■□□ 2.2
SUDS3P1-201ENST00000505831 ELL2O00472 640 aaPredicted RBP28.76■■■□□ 2.19
SUDS3P1-201ENST00000505831 PPIP5K2O43314 1243 aa28.76■■■□□ 2.19
SUDS3P1-201ENST00000505831 SCNN1DP51172 638 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms