RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 TNS4Q8IZW8 715 aa14.6□□□□□ -0.07
UBE2D3-219ENST00000505207 GPC2Q8N158 579 aa14.6□□□□□ -0.07
UBE2D3-219ENST00000505207 ZBTB3Q9H5J0 574 aa14.6□□□□□ -0.07
UBE2D3-219ENST00000505207 ARFGEF2Q9Y6D5 1785 aa14.6□□□□□ -0.07
UBE2D3-219ENST00000505207 IBTKQ9P2D0 1353 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-219ENST00000505207 FZD9O00144 591 aa14.59□□□□□ -0.07
UBE2D3-219ENST00000505207 GPTP24298 496 aa14.59□□□□□ -0.07
UBE2D3-219ENST00000505207 EPHX2P34913 555 aa14.59□□□□□ -0.07
UBE2D3-219ENST00000505207 RIPK4P57078 832 aa14.59□□□□□ -0.07
UBE2D3-219ENST00000505207 NLRP3Q96P20 1036 aa14.59□□□□□ -0.07
UBE2D3-219ENST00000505207 CRAMP1Q96RY5 1269 aa14.59□□□□□ -0.07
UBE2D3-219ENST00000505207 THUMPD2Q9BTF0 503 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-219ENST00000505207 TMEM88BA6NKF7 163 aa14.58□□□□□ -0.08
UBE2D3-219ENST00000505207 LMOD1P29536 600 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-219ENST00000505207 ZNF34Q8IZ26 560 aa14.58□□□□□ -0.08
UBE2D3-219ENST00000505207 POTEIP0CG38 1075 aa14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 POTEJP0CG39 1038 aa14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 EIF2S2P20042 333 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 HSP90AB3PQ58FF7 597 aa14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 SUSD4Q5VX71 490 aa14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 OLFM4Q6UX06 510 aa14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 LARGE2Q8N3Y3 721 aa14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 UTP14AQ9BVJ6 771 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 MKRN1Q9UHC7 482 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 ZNF541Q9H0D2 1346 aa14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 SCN4AP35499 1836 aa14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 RIC1Q4ADV7 1423 aa14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 CACNA1SQ13698 1873 aa14.57□□□□□ -0.08
UBE2D3-219ENST00000505207 LAMB4A4D0S4 1761 aa14.56□□□□□ -0.08
UBE2D3-219ENST00000505207 PPEF1O14829 653 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-219ENST00000505207 VPS33BQ9H267 617 aa14.56□□□□□ -0.08
UBE2D3-219ENST00000505207 RNF123Q5XPI4 1314 aa14.56□□□□□ -0.08
UBE2D3-219ENST00000505207 PASKQ96RG2 1323 aa14.56□□□□□ -0.08
UBE2D3-219ENST00000505207 NTSR2O95665 410 aa14.55□□□□□ -0.08
UBE2D3-219ENST00000505207 SLC10A5Q5PT55 438 aa14.55□□□□□ -0.08
UBE2D3-219ENST00000505207 CNTROBQ8N137 903 aa14.55□□□□□ -0.08
UBE2D3-219ENST00000505207 SUPT20HQ8NEM7 779 aa14.55□□□□□ -0.08
UBE2D3-219ENST00000505207 AIDAQ96BJ3 306 aa14.55□□□□□ -0.08
UBE2D3-219ENST00000505207 GJA3Q9Y6H8 435 aa14.55□□□□□ -0.08
UBE2D3-219ENST00000505207 UBN2Q6ZU65 1347 aa14.55□□□□□ -0.08
UBE2D3-219ENST00000505207 ABCC12Q96J65 1359 aa14.55□□□□□ -0.08
UBE2D3-219ENST00000505207 ITGBL1O95965 494 aaPredicted RBP14.54□□□□□ -0.08
UBE2D3-219ENST00000505207 TMPOP42166 694 aaKnown RBP14.54□□□□□ -0.08
UBE2D3-219ENST00000505207 NIM1KQ8IY84 436 aa14.54□□□□□ -0.08
UBE2D3-219ENST00000505207 CNTNAP1P78357 1384 aa14.54□□□□□ -0.08
UBE2D3-219ENST00000505207 KDM3BQ7LBC6 1761 aa14.53□□□□□ -0.08
UBE2D3-219ENST00000505207 TCERG1O14776 1098 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-219ENST00000505207 BBOX1O75936 387 aa14.53□□□□□ -0.08
UBE2D3-219ENST00000505207 DLG5Q8TDM6 1919 aa14.53□□□□□ -0.08
UBE2D3-219ENST00000505207 ATP6V0A2Q9Y487 856 aa14.52□□□□□ -0.09
UBE2D3-219ENST00000505207 NUP98P52948 1817 aa14.52□□□□□ -0.09
UBE2D3-219ENST00000505207 PPIP5K2O43314 1243 aa14.51□□□□□ -0.09
UBE2D3-219ENST00000505207 CAPN15O75808 1086 aa14.51□□□□□ -0.09
UBE2D3-219ENST00000505207 AIMP1Q12904 312 aaKnown RBP14.51□□□□□ -0.09
UBE2D3-219ENST00000505207 WDR43Q15061 677 aaKnown RBP eCLIP14.51□□□□□ -0.09
UBE2D3-219ENST00000505207 PDIA6Q15084 440 aa14.51□□□□□ -0.09
UBE2D3-219ENST00000505207 DEFB115Q30KQ5 88 aa14.51□□□□□ -0.09
UBE2D3-219ENST00000505207 MAP1SQ66K74 1059 aaPredicted RBP14.51□□□□□ -0.09
UBE2D3-219ENST00000505207 USP50Q70EL3 339 aaPredicted RBP14.51□□□□□ -0.09
UBE2D3-219ENST00000505207 COPS6Q7L5N1 327 aa14.51□□□□□ -0.09
UBE2D3-219ENST00000505207 DDX21Q9NR30 783 aaKnown RBP eCLIP14.51□□□□□ -0.09
UBE2D3-219ENST00000505207 CTCFP49711 727 aaPredicted RBP14.5□□□□□ -0.09
UBE2D3-219ENST00000505207 VEGFBP49765 207 aa14.5□□□□□ -0.09
UBE2D3-219ENST00000505207 TCIRG1Q13488 830 aa14.5□□□□□ -0.09
UBE2D3-219ENST00000505207 DDX46Q7L014 1031 aaKnown RBP14.5□□□□□ -0.09
UBE2D3-219ENST00000505207 TMC4Q7Z404 712 aa14.5□□□□□ -0.09
UBE2D3-219ENST00000505207 LRP10Q7Z4F1 713 aa14.5□□□□□ -0.09
UBE2D3-219ENST00000505207 SP8Q8IXZ3 490 aa14.5□□□□□ -0.09
UBE2D3-219ENST00000505207 XAGE3Q8WTP9 111 aa14.5□□□□□ -0.09
UBE2D3-219ENST00000505207 TRMT112Q9UI30 125 aaKnown RBP14.5□□□□□ -0.09
UBE2D3-219ENST00000505207 ABT1Q9ULW3 272 aaKnown RBP14.5□□□□□ -0.09
UBE2D3-219ENST00000505207 SH3TC1Q8TE82 1336 aa14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 MYBBP1AQ9BQG0 1328 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 CHL1O00533 1208 aa14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 NEUROD2Q15784 382 aa14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 DPP8Q6V1X1 898 aaPredicted RBP14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 NLRP10Q86W26 655 aa14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 MPNDQ8N594 471 aa14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 RUNDC1Q96C34 613 aa14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 PRDM10Q9NQV6 1147 aa14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 ZNRF3Q9ULT6 936 aa14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 LAS1LQ9Y4W2 734 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 SNED1Q8TER0 1413 aa14.49□□□□□ -0.09
UBE2D3-219ENST00000505207 RASSF10A6NK89 507 aa14.48□□□□□ -0.09
UBE2D3-219ENST00000505207 ANXA1P04083 346 aa14.48□□□□□ -0.09
UBE2D3-219ENST00000505207 HOXB7P09629 217 aa14.48□□□□□ -0.09
UBE2D3-219ENST00000505207 MAP2K1Q02750 393 aaPredicted RBP14.48□□□□□ -0.09
UBE2D3-219ENST00000505207 TNIP1Q15025 636 aa14.48□□□□□ -0.09
UBE2D3-219ENST00000505207 AOC3Q16853 763 aa14.48□□□□□ -0.09
UBE2D3-219ENST00000505207 PROSER3Q2NL68 480 aa14.48□□□□□ -0.09
UBE2D3-219ENST00000505207 NECTIN2Q92692 538 aa14.48□□□□□ -0.09
UBE2D3-219ENST00000505207 RTFDC1Q9BY42 306 aaPredicted RBP14.48□□□□□ -0.09
UBE2D3-219ENST00000505207 ABCC4O15439 1325 aa14.47□□□□□ -0.09
UBE2D3-219ENST00000505207 PCNTO95613 3336 aa14.47□□□□□ -0.09
UBE2D3-219ENST00000505207 FOXN1O15353 648 aa14.47□□□□□ -0.09
UBE2D3-219ENST00000505207 HCLS1P14317 486 aaPredicted RBP14.47□□□□□ -0.09
UBE2D3-219ENST00000505207 EPS15P42566 896 aa14.47□□□□□ -0.09
UBE2D3-219ENST00000505207 ECE1P42892 770 aa14.47□□□□□ -0.09
UBE2D3-219ENST00000505207 SCNN1DP51172 638 aa14.47□□□□□ -0.09
UBE2D3-219ENST00000505207 DDX10Q13206 875 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms