RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 TBC1D8BQ0IIM8 1120 aa7.19□□□□□ -1.26
RFC1-208ENST00000504849 SIRT1Q96EB6 747 aa7.19□□□□□ -1.26
RFC1-208ENST00000504849 ALX3O95076 343 aa7.18□□□□□ -1.26
RFC1-208ENST00000504849 IGLV1-40P01703 118 aa7.18□□□□□ -1.26
RFC1-208ENST00000504849 TEAD4Q15561 434 aa7.18□□□□□ -1.26
RFC1-208ENST00000504849 KRTAP5-3Q6L8H2 238 aa7.18□□□□□ -1.26
RFC1-208ENST00000504849 DTX1Q86Y01 620 aa7.18□□□□□ -1.26
RFC1-208ENST00000504849 ZDHHC13Q8IUH4 622 aa7.18□□□□□ -1.26
RFC1-208ENST00000504849 CCER1Q8TC90 406 aaPredicted RBP7.18□□□□□ -1.26
RFC1-208ENST00000504849 KDM4CQ9H3R0 1056 aa7.18□□□□□ -1.26
RFC1-208ENST00000504849 GPBP1L1Q9HC44 474 aaPredicted RBP7.18□□□□□ -1.26
RFC1-208ENST00000504849 SCHIP1Q9P0W5 487 aaPredicted RBP7.18□□□□□ -1.26
RFC1-208ENST00000504849 DLL1O00548 723 aa7.17□□□□□ -1.26
RFC1-208ENST00000504849 PLAURQ03405 335 aa7.17□□□□□ -1.26
RFC1-208ENST00000504849 TYRO3Q06418 890 aa7.17□□□□□ -1.26
RFC1-208ENST00000504849 SH3PXD2AQ5TCZ1 1133 aa7.17□□□□□ -1.26
RFC1-208ENST00000504849 POU5F2Q8N7G0 328 aa7.17□□□□□ -1.26
RFC1-208ENST00000504849 DNAJB12Q9NXW2 375 aaKnown RBP7.17□□□□□ -1.26
RFC1-208ENST00000504849 KCNH4Q9UQ05 1017 aa7.17□□□□□ -1.26
RFC1-208ENST00000504849 RGS9O75916 674 aaPredicted RBP7.16□□□□□ -1.26
RFC1-208ENST00000504849 NOS2P35228 1153 aa7.16□□□□□ -1.26
RFC1-208ENST00000504849 LCE5AQ5TCM9 118 aa7.16□□□□□ -1.26
RFC1-208ENST00000504849 Q6ZS46 218 aa7.16□□□□□ -1.26
RFC1-208ENST00000504849 HSH2DQ96JZ2 352 aa7.16□□□□□ -1.26
RFC1-208ENST00000504849 IGFLR1Q9H665 355 aa7.16□□□□□ -1.26
RFC1-208ENST00000504849 AKTIPQ9H8T0 292 aa7.16□□□□□ -1.26
RFC1-208ENST00000504849 SUPT5HO00267 1087 aaKnown RBP7.15□□□□□ -1.26
RFC1-208ENST00000504849 RANGAP1P46060 587 aaPredicted RBP7.15□□□□□ -1.26
RFC1-208ENST00000504849 CEP63Q96MT8 703 aa7.15□□□□□ -1.26
RFC1-208ENST00000504849 RAXQ9Y2V3 346 aa7.15□□□□□ -1.26
RFC1-208ENST00000504849 GSC2O15499 205 aa7.14□□□□□ -1.27
RFC1-208ENST00000504849 EPHA4P54764 986 aa7.14□□□□□ -1.27
RFC1-208ENST00000504849 NEUROD2Q15784 382 aa7.14□□□□□ -1.27
RFC1-208ENST00000504849 SLFNL1Q499Z3 407 aa7.14□□□□□ -1.27
RFC1-208ENST00000504849 MTMR14Q8NCE2 650 aa7.14□□□□□ -1.27
RFC1-208ENST00000504849 LPIN3Q9BQK8 851 aa7.14□□□□□ -1.27
RFC1-208ENST00000504849 PODXL2Q9NZ53 605 aa7.14□□□□□ -1.27
RFC1-208ENST00000504849 NDUFB9Q9Y6M9 179 aa7.14□□□□□ -1.27
RFC1-208ENST00000504849 PRR19A6NJB7 356 aa7.13□□□□□ -1.27
RFC1-208ENST00000504849 F8W735 103 aaPredicted RBP7.13□□□□□ -1.27
RFC1-208ENST00000504849 TMEM130Q8N3G9 435 aa7.13□□□□□ -1.27
RFC1-208ENST00000504849 ZNF280CQ8ND82 737 aa7.13□□□□□ -1.27
RFC1-208ENST00000504849 NEUROD4Q9HD90 331 aa7.13□□□□□ -1.27
RFC1-208ENST00000504849 PTCD1O75127 700 aaKnown RBP7.12□□□□□ -1.27
RFC1-208ENST00000504849 RHPN1Q8TCX5 695 aa7.12□□□□□ -1.27
RFC1-208ENST00000504849 PCDHGA11Q9Y5H2 935 aa7.12□□□□□ -1.27
RFC1-208ENST00000504849 WNT11O96014 354 aa7.11□□□□□ -1.27
RFC1-208ENST00000504849 FBLN7Q53RD9 439 aa7.11□□□□□ -1.27
RFC1-208ENST00000504849 INTS5Q6P9B9 1019 aaKnown RBP7.11□□□□□ -1.27
RFC1-208ENST00000504849 SPOCD1Q6ZMY3 1216 aa7.11□□□□□ -1.27
RFC1-208ENST00000504849 SFI1A8K8P3 1242 aa7.1□□□□□ -1.27
RFC1-208ENST00000504849 TBCELQ5QJ74 424 aa7.1□□□□□ -1.27
RFC1-208ENST00000504849 ABI1Q8IZP0 508 aa7.1□□□□□ -1.27
RFC1-208ENST00000504849 PERM1Q5SV97 790 aa7.09□□□□□ -1.27
RFC1-208ENST00000504849 WFDC8Q8IUA0 241 aa7.09□□□□□ -1.27
RFC1-208ENST00000504849 SLC9A9Q8IVB4 645 aa7.09□□□□□ -1.27
RFC1-208ENST00000504849 GSX2Q9BZM3 304 aa7.09□□□□□ -1.27
RFC1-208ENST00000504849 FRRS1LQ9P0K9 344 aa7.09□□□□□ -1.27
RFC1-208ENST00000504849 FAM35AQ86V20 835 aa7.08□□□□□ -1.28
RFC1-208ENST00000504849 PLPP7Q8NBV4 271 aa7.08□□□□□ -1.28
RFC1-208ENST00000504849 UBL7Q96S82 380 aaPredicted RBP7.08□□□□□ -1.28
RFC1-208ENST00000504849 MRPL18Q9H0U6 180 aaKnown RBP7.08□□□□□ -1.28
RFC1-208ENST00000504849 ZNF358Q9NW07 568 aa7.08□□□□□ -1.28
RFC1-208ENST00000504849 STOML1Q9UBI4 398 aa7.08□□□□□ -1.28
RFC1-208ENST00000504849 ZNF232Q9UNY5 417 aa7.08□□□□□ -1.28
RFC1-208ENST00000504849 CPB1P15086 417 aa7.07□□□□□ -1.28
RFC1-208ENST00000504849 GRIK1P39086 918 aa7.07□□□□□ -1.28
RFC1-208ENST00000504849 NFIAQ12857 509 aa7.07□□□□□ -1.28
RFC1-208ENST00000504849 MAP7D1Q3KQU3 841 aa7.07□□□□□ -1.28
RFC1-208ENST00000504849 POTEAQ6S8J7 498 aa7.07□□□□□ -1.28
RFC1-208ENST00000504849 CBLL1Q75N03 491 aa7.07□□□□□ -1.28
RFC1-208ENST00000504849 ARMC10Q8N2F6 343 aa7.07□□□□□ -1.28
RFC1-208ENST00000504849 AGGF1Q8N302 714 aaeCLIP7.07□□□□□ -1.281e-7■□□□□ 9.2
RFC1-208ENST00000504849 SUSD3Q96L08 255 aa7.07□□□□□ -1.28
RFC1-208ENST00000504849 EFCC1Q9HA90 598 aa7.07□□□□□ -1.28
RFC1-208ENST00000504849 SERTM1A2A2V5 107 aa7.06□□□□□ -1.28
RFC1-208ENST00000504849 ZBTB42B2RXF5 422 aa7.06□□□□□ -1.28
RFC1-208ENST00000504849 BACH1O14867 736 aa7.06□□□□□ -1.28
RFC1-208ENST00000504849 C1orf53Q5VUE5 145 aa7.06□□□□□ -1.28
RFC1-208ENST00000504849 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.06□□□□□ -1.28
RFC1-208ENST00000504849 TTC9Q92623 222 aa7.06□□□□□ -1.28
RFC1-208ENST00000504849 GOPCQ9HD26 462 aa7.06□□□□□ -1.28
RFC1-208ENST00000504849 EIF4G2P78344 907 aaKnown RBP eCLIP7.05□□□□□ -1.28
RFC1-208ENST00000504849 ANKIB1Q9P2G1 1089 aa7.05□□□□□ -1.28
RFC1-208ENST00000504849 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.05□□□□□ -1.28
RFC1-208ENST00000504849 NFKB1P19838 968 aa7.04□□□□□ -1.28
RFC1-208ENST00000504849 HIRAP54198 1017 aaPredicted RBP7.04□□□□□ -1.28
RFC1-208ENST00000504849 GLB1P16278 677 aa7.03□□□□□ -1.28
RFC1-208ENST00000504849 ITGB5P18084 799 aa7.03□□□□□ -1.28
RFC1-208ENST00000504849 BTLAQ7Z6A9 289 aa7.03□□□□□ -1.28
RFC1-208ENST00000504849 TNS4Q8IZW8 715 aa7.03□□□□□ -1.28
RFC1-208ENST00000504849 PCMTD1Q96MG8 357 aaPredicted RBP7.03□□□□□ -1.28
RFC1-208ENST00000504849 PHACTR1Q9C0D0 580 aa7.03□□□□□ -1.28
RFC1-208ENST00000504849 C7orf69Q9H7B7 122 aa7.03□□□□□ -1.28
RFC1-208ENST00000504849 GRNP28799 593 aaKnown RBP7.02□□□□□ -1.29
RFC1-208ENST00000504849 IRF5Q13568 498 aa7.02□□□□□ -1.29
RFC1-208ENST00000504849 NFXL1Q6ZNB6 911 aa7.02□□□□□ -1.29
RFC1-208ENST00000504849 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.02□□□□□ -1.29
RFC1-208ENST00000504849 TRIM42Q8IWZ5 723 aa7.02□□□□□ -1.29
RFC1-208ENST00000504849 BANK1Q8NDB2 785 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms