RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 C2CD5Q86YS7 1000 aa12.28□□□□□ -0.44
DHFR-202ENST00000504396 TNS4Q8IZW8 715 aa12.28□□□□□ -0.44
DHFR-202ENST00000504396 LGR6Q9HBX8 967 aa12.28□□□□□ -0.44
DHFR-202ENST00000504396 ZBTB1Q9Y2K1 713 aa12.28□□□□□ -0.44
DHFR-202ENST00000504396 ZNF330Q9Y3S2 320 aaPredicted RBP12.28□□□□□ -0.44
DHFR-202ENST00000504396 ZC3H4Q9UPT8 1303 aaKnown RBP12.28□□□□□ -0.44
DHFR-202ENST00000504396 SERPINB2P05120 415 aa12.28□□□□□ -0.44
DHFR-202ENST00000504396 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
DHFR-202ENST00000504396 MFSD10Q14728 455 aa12.28□□□□□ -0.44
DHFR-202ENST00000504396 TTLL6Q8N841 843 aa12.28□□□□□ -0.44
DHFR-202ENST00000504396 JMYQ8N9B5 988 aa12.28□□□□□ -0.44
DHFR-202ENST00000504396 NARFQ9UHQ1 456 aa12.28□□□□□ -0.44
DHFR-202ENST00000504396 MRC1P22897 1456 aa12.27□□□□□ -0.44
DHFR-202ENST00000504396 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.44
DHFR-202ENST00000504396 H0YIN7 160 aa12.27□□□□□ -0.45
DHFR-202ENST00000504396 NPHP1O15259 732 aa12.27□□□□□ -0.45
DHFR-202ENST00000504396 RNMTO43148 476 aaKnown RBP12.27□□□□□ -0.45
DHFR-202ENST00000504396 VEGFAP15692 232 aaPredicted RBP12.27□□□□□ -0.45
DHFR-202ENST00000504396 TTC5Q8N0Z6 440 aa12.27□□□□□ -0.45
DHFR-202ENST00000504396 NRXN2Q9P2S2 1712 aa12.26□□□□□ -0.45
DHFR-202ENST00000504396 GLTPD2A6NH11 291 aa12.26□□□□□ -0.45
DHFR-202ENST00000504396 ZNF622Q969S3 477 aaKnown RBP eCLIP12.26□□□□□ -0.45
DHFR-202ENST00000504396 CARMIL3Q8ND23 1372 aa12.25□□□□□ -0.45
DHFR-202ENST00000504396 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
DHFR-202ENST00000504396 CNGB1Q14028 1251 aaPredicted RBP12.24□□□□□ -0.45
DHFR-202ENST00000504396 MTHFSDQ2M296 383 aaKnown RBP12.24□□□□□ -0.45
DHFR-202ENST00000504396 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
DHFR-202ENST00000504396 BCL2L12Q9HB09 334 aa12.24□□□□□ -0.45
DHFR-202ENST00000504396 SCN7AQ01118 1682 aa12.23□□□□□ -0.45
DHFR-202ENST00000504396 A0A087WZG4 1122 aa12.23□□□□□ -0.45
DHFR-202ENST00000504396 STARD3NLO95772 234 aa12.23□□□□□ -0.45
DHFR-202ENST00000504396 HSPA1AP0DMV8 641 aaKnown RBP12.23□□□□□ -0.45
DHFR-202ENST00000504396 HSPA1BP0DMV9 641 aaKnown RBP12.23□□□□□ -0.45
DHFR-202ENST00000504396 PRELPP51888 382 aa12.23□□□□□ -0.45
DHFR-202ENST00000504396 VSIG10Q8N0Z9 540 aa12.23□□□□□ -0.45
DHFR-202ENST00000504396 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
DHFR-202ENST00000504396 OXER1Q8TDS5 423 aa12.23□□□□□ -0.45
DHFR-202ENST00000504396 LHX6Q9UPM6 363 aa12.23□□□□□ -0.45
DHFR-202ENST00000504396 UBR2Q8IWV8 1755 aa12.23□□□□□ -0.45
DHFR-202ENST00000504396 CACNA1SQ13698 1873 aa12.23□□□□□ -0.45
DHFR-202ENST00000504396 NFKBIEO00221 500 aa12.22□□□□□ -0.45
DHFR-202ENST00000504396 C21orf2O43822 256 aa12.22□□□□□ -0.45
DHFR-202ENST00000504396 DIAPH1O60610 1272 aaKnown RBP12.22□□□□□ -0.45
DHFR-202ENST00000504396 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
DHFR-202ENST00000504396 PLSCR2Q9NRY7 297 aa12.22□□□□□ -0.45
DHFR-202ENST00000504396 COL11A2P13942 1736 aaPredicted RBP12.22□□□□□ -0.45
DHFR-202ENST00000504396 ANKRD31Q8N7Z5 1873 aa12.22□□□□□ -0.45
DHFR-202ENST00000504396 TBC1D12O60347 775 aa12.21□□□□□ -0.45
DHFR-202ENST00000504396 PDE6BP35913 854 aa12.21□□□□□ -0.45
DHFR-202ENST00000504396 TEFQ10587 303 aa12.21□□□□□ -0.45
DHFR-202ENST00000504396 CC2D1BQ5T0F9 858 aaKnown RBP12.21□□□□□ -0.45
DHFR-202ENST00000504396 TBC1D9BQ66K14 1250 aa12.21□□□□□ -0.45
DHFR-202ENST00000504396 U2SURPO15042 1029 aaKnown RBP12.2□□□□□ -0.46
DHFR-202ENST00000504396 PDZRN3Q9UPQ7 1066 aa12.2□□□□□ -0.46
DHFR-202ENST00000504396 TBC1D2BQ9UPU7 963 aa12.2□□□□□ -0.46
DHFR-202ENST00000504396 EIF5P55010 431 aaKnown RBP12.2□□□□□ -0.46
DHFR-202ENST00000504396 ST5P78524 1137 aa12.2□□□□□ -0.46
DHFR-202ENST00000504396 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
DHFR-202ENST00000504396 KRTAP3-3Q9BYR6 98 aa12.2□□□□□ -0.46
DHFR-202ENST00000504396 KRTAP3-2Q9BYR7 98 aa12.2□□□□□ -0.46
DHFR-202ENST00000504396 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
DHFR-202ENST00000504396 FER1L6Q2WGJ9 1857 aa12.19□□□□□ -0.46
DHFR-202ENST00000504396 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
DHFR-202ENST00000504396 ZNF496Q96IT1 587 aaPredicted RBP12.19□□□□□ -0.46
DHFR-202ENST00000504396 SETDB2Q96T68 719 aa12.19□□□□□ -0.46
DHFR-202ENST00000504396 BRIP1Q9BX63 1249 aa12.19□□□□□ -0.46
DHFR-202ENST00000504396 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
DHFR-202ENST00000504396 DICER1Q9UPY3 1922 aaKnown RBP12.18□□□□□ -0.46
DHFR-202ENST00000504396 HEG1Q9ULI3 1381 aa12.18□□□□□ -0.46
DHFR-202ENST00000504396 EMILIN3Q9NT22 766 aa12.18□□□□□ -0.46
DHFR-202ENST00000504396 GNAT3A8MTJ3 354 aa12.17□□□□□ -0.46
DHFR-202ENST00000504396 ZNF790Q6PG37 636 aa12.17□□□□□ -0.46
DHFR-202ENST00000504396 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
DHFR-202ENST00000504396 GAS2L2Q8NHY3 880 aa12.17□□□□□ -0.46
DHFR-202ENST00000504396 CCER1Q8TC90 406 aaPredicted RBP12.17□□□□□ -0.46
DHFR-202ENST00000504396 CNKSR1Q969H4 720 aa12.17□□□□□ -0.46
DHFR-202ENST00000504396 FMNL2Q96PY5 1086 aa12.17□□□□□ -0.46
DHFR-202ENST00000504396 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
DHFR-202ENST00000504396 SIPA1L3O60292 1781 aaPredicted RBP12.17□□□□□ -0.46
DHFR-202ENST00000504396 KIF7Q2M1P5 1343 aa12.17□□□□□ -0.46
DHFR-202ENST00000504396 BCORQ6W2J9 1755 aa12.16□□□□□ -0.46
DHFR-202ENST00000504396 POTECB2RU33 542 aa12.16□□□□□ -0.46
DHFR-202ENST00000504396 DDNO94850 711 aaPredicted RBP12.16□□□□□ -0.46
DHFR-202ENST00000504396 A1BGP04217 495 aa12.16□□□□□ -0.46
DHFR-202ENST00000504396 IL6STP40189 918 aaPredicted RBP12.16□□□□□ -0.46
DHFR-202ENST00000504396 PRPF40BQ6NWY9 871 aaKnown RBP12.16□□□□□ -0.46
DHFR-202ENST00000504396 SLX4Q8IY92 1834 aa12.15□□□□□ -0.46
DHFR-202ENST00000504396 SOGA3Q5TF21 947 aa12.15□□□□□ -0.46
DHFR-202ENST00000504396 DZIP3Q86Y13 1208 aaKnown RBP12.15□□□□□ -0.46
DHFR-202ENST00000504396 PCNTO95613 3336 aa12.15□□□□□ -0.46
DHFR-202ENST00000504396 ARFGEF2Q9Y6D5 1785 aa12.15□□□□□ -0.46
DHFR-202ENST00000504396 NPC1L1Q9UHC9 1359 aa12.15□□□□□ -0.47
DHFR-202ENST00000504396 IQCA1LA6NCM1 817 aa12.14□□□□□ -0.47
DHFR-202ENST00000504396 BTBD11A6QL63 1104 aa12.14□□□□□ -0.47
DHFR-202ENST00000504396 PIP4K2AP48426 406 aaPredicted RBP12.14□□□□□ -0.47
DHFR-202ENST00000504396 STYK1Q6J9G0 422 aa12.14□□□□□ -0.47
DHFR-202ENST00000504396 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
DHFR-202ENST00000504396 IL17REQ8NFR9 667 aa12.14□□□□□ -0.47
DHFR-202ENST00000504396 MASTLQ96GX5 879 aa12.14□□□□□ -0.47
DHFR-202ENST00000504396 CAMTA2O94983 1202 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms