RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 PPP1R42Q7Z4L9 355 aa17.77■□□□□ 0.44
HOXC6-203ENST00000504315 SNED1Q8TER0 1413 aa17.77■□□□□ 0.44
HOXC6-203ENST00000504315 WDR90Q96KV7 1748 aa17.77■□□□□ 0.44
HOXC6-203ENST00000504315 HOXA10P31260 410 aaPredicted RBP17.75■□□□□ 0.43
HOXC6-203ENST00000504315 TCIRG1Q13488 830 aa17.75■□□□□ 0.43
HOXC6-203ENST00000504315 WWC1Q8IX03 1113 aa17.75■□□□□ 0.43
HOXC6-203ENST00000504315 TAOK3Q9H2K8 898 aa17.75■□□□□ 0.43
HOXC6-203ENST00000504315 HYPKQ9NX55 129 aa17.75■□□□□ 0.43
HOXC6-203ENST00000504315 ALDH1B1P30837 517 aa17.74■□□□□ 0.43
HOXC6-203ENST00000504315 AIMP1Q12904 312 aaKnown RBP17.74■□□□□ 0.43
HOXC6-203ENST00000504315 SLC10A5Q5PT55 438 aa17.74■□□□□ 0.43
HOXC6-203ENST00000504315 PLBD2Q8NHP8 589 aa17.74■□□□□ 0.43
HOXC6-203ENST00000504315 UTP14AQ9BVJ6 771 aaKnown RBP17.74■□□□□ 0.43
HOXC6-203ENST00000504315 IL16Q14005 1332 aa17.73■□□□□ 0.43
HOXC6-203ENST00000504315 KDM2BQ8NHM5 1336 aa17.73■□□□□ 0.43
HOXC6-203ENST00000504315 MYH3P11055 1940 aa17.73■□□□□ 0.43
HOXC6-203ENST00000504315 NLRP10Q86W26 655 aa17.73■□□□□ 0.43
HOXC6-203ENST00000504315 NMRK2Q9NPI5 230 aa17.73■□□□□ 0.43
HOXC6-203ENST00000504315 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
HOXC6-203ENST00000504315 CCDC93Q567U6 631 aa17.72■□□□□ 0.43
HOXC6-203ENST00000504315 ANKRD13DQ6ZTN6 518 aa17.72■□□□□ 0.43
HOXC6-203ENST00000504315 C8orf58Q8NAV2 365 aa17.72■□□□□ 0.43
HOXC6-203ENST00000504315 SCN4AP35499 1836 aa17.72■□□□□ 0.43
HOXC6-203ENST00000504315 GLTPD2A6NH11 291 aa17.71■□□□□ 0.43
HOXC6-203ENST00000504315 CRAMP1Q96RY5 1269 aa17.71■□□□□ 0.43
HOXC6-203ENST00000504315 ISCA1Q9BUE6 129 aa17.71■□□□□ 0.43
HOXC6-203ENST00000504315 LRRC37AA6NMS7 1700 aa17.71■□□□□ 0.43
HOXC6-203ENST00000504315 TOMM70O94826 608 aa17.7■□□□□ 0.42
HOXC6-203ENST00000504315 C3orf67Q6ZVT6 689 aa17.7■□□□□ 0.42
HOXC6-203ENST00000504315 RPGRQ92834 1020 aaKnown RBP17.7■□□□□ 0.42
HOXC6-203ENST00000504315 CHMP4AQ9BY43 222 aa17.7■□□□□ 0.42
HOXC6-203ENST00000504315 SENP3-EIF4A1A0A087X0R7 540 aa17.69■□□□□ 0.42
HOXC6-203ENST00000504315 FKBP4Q02790 459 aaKnown RBP eCLIP17.69■□□□□ 0.42
HOXC6-203ENST00000504315 CC2D2BQ6DHV5 1058 aa17.69■□□□□ 0.42
HOXC6-203ENST00000504315 RTKN2Q8IZC4 609 aa17.69■□□□□ 0.42
HOXC6-203ENST00000504315 TSPYL6Q8N831 410 aa17.69■□□□□ 0.42
HOXC6-203ENST00000504315 NLRP3Q96P20 1036 aa17.69■□□□□ 0.42
HOXC6-203ENST00000504315 SH3TC1Q8TE82 1336 aa17.69■□□□□ 0.42
HOXC6-203ENST00000504315 ELL2O00472 640 aaPredicted RBP17.68■□□□□ 0.42
HOXC6-203ENST00000504315 TRIM28Q13263 835 aaKnown RBP17.68■□□□□ 0.42
HOXC6-203ENST00000504315 CCDC30Q5VVM6 783 aa17.68■□□□□ 0.42
HOXC6-203ENST00000504315 OLFM4Q6UX06 510 aa17.68■□□□□ 0.42
HOXC6-203ENST00000504315 TSR2Q969E8 191 aaKnown RBP17.68■□□□□ 0.42
HOXC6-203ENST00000504315 WDR63Q8IWG1 891 aa17.67■□□□□ 0.42
HOXC6-203ENST00000504315 RBM46Q8TBY0 533 aaKnown RBP17.67■□□□□ 0.42
HOXC6-203ENST00000504315 RBM17Q96I25 401 aaKnown RBP17.67■□□□□ 0.42
HOXC6-203ENST00000504315 PSMD1Q99460 953 aa17.67■□□□□ 0.42
HOXC6-203ENST00000504315 PHAXQ9H814 394 aaKnown RBP17.67■□□□□ 0.42
HOXC6-203ENST00000504315 TRMT112Q9UI30 125 aaKnown RBP17.67■□□□□ 0.42
HOXC6-203ENST00000504315 GRIPAP1Q4V328 841 aa17.66■□□□□ 0.42
HOXC6-203ENST00000504315 SYNE4Q8N205 404 aa17.66■□□□□ 0.42
HOXC6-203ENST00000504315 HSPA6P17066 643 aa17.65■□□□□ 0.42
HOXC6-203ENST00000504315 GOLGA2Q08379 1002 aa17.65■□□□□ 0.42
HOXC6-203ENST00000504315 RRAGCQ9HB90 399 aa17.65■□□□□ 0.42
HOXC6-203ENST00000504315 ABCC4O15439 1325 aa17.65■□□□□ 0.42
HOXC6-203ENST00000504315 FANCIQ9NVI1 1328 aa17.65■□□□□ 0.42
HOXC6-203ENST00000504315 PPEF1O14829 653 aaPredicted RBP17.64■□□□□ 0.41
HOXC6-203ENST00000504315 TWISTNBQ3B726 338 aaPredicted RBP17.64■□□□□ 0.41
HOXC6-203ENST00000504315 DPY19L2Q6NUT2 758 aa17.64■□□□□ 0.41
HOXC6-203ENST00000504315 COL4A5P29400 1685 aa17.64■□□□□ 0.41
HOXC6-203ENST00000504315 LTBP1Q14766 1721 aa17.64■□□□□ 0.41
HOXC6-203ENST00000504315 CEP350Q5VT06 3117 aa17.63■□□□□ 0.41
HOXC6-203ENST00000504315 POTECB2RU33 542 aa17.63■□□□□ 0.41
HOXC6-203ENST00000504315 ATP5J2-PTCD1G3V325 749 aa17.63■□□□□ 0.41
HOXC6-203ENST00000504315 HCLS1P14317 486 aaPredicted RBP17.63■□□□□ 0.41
HOXC6-203ENST00000504315 VEGFAP15692 232 aaPredicted RBP17.63■□□□□ 0.41
HOXC6-203ENST00000504315 RIC3Q7Z5B4 369 aa17.63■□□□□ 0.41
HOXC6-203ENST00000504315 ZNF277Q9NRM2 450 aaPredicted RBP17.63■□□□□ 0.41
HOXC6-203ENST00000504315 COL4A1P02462 1669 aa17.62■□□□□ 0.41
HOXC6-203ENST00000504315 IARSP41252 1262 aaKnown RBP17.62■□□□□ 0.41
HOXC6-203ENST00000504315 C16orf71Q8IYS4 520 aaPredicted RBP17.62■□□□□ 0.41
HOXC6-203ENST00000504315 FZD9O00144 591 aa17.61■□□□□ 0.41
HOXC6-203ENST00000504315 DDX58O95786 925 aaKnown RBP17.61■□□□□ 0.41
HOXC6-203ENST00000504315 FSTL1Q12841 308 aa17.61■□□□□ 0.41
HOXC6-203ENST00000504315 SF3B3Q15393 1217 aaKnown RBP17.61■□□□□ 0.41
HOXC6-203ENST00000504315 FAM9BQ8IZU0 186 aa17.61■□□□□ 0.41
HOXC6-203ENST00000504315 ZBTB38Q8NAP3 1195 aaPredicted RBP17.61■□□□□ 0.41
HOXC6-203ENST00000504315 CCDC191Q8NCU4 936 aa17.61■□□□□ 0.41
HOXC6-203ENST00000504315 METTL22Q9BUU2 404 aaPredicted RBP17.61■□□□□ 0.41
HOXC6-203ENST00000504315 ATP6V0A2Q9Y487 856 aa17.61■□□□□ 0.41
HOXC6-203ENST00000504315 ADAMTSL1Q8N6G6 1762 aa17.61■□□□□ 0.41
HOXC6-203ENST00000504315 BBOX1O75936 387 aa17.6■□□□□ 0.41
HOXC6-203ENST00000504315 SLC51AQ86UW1 340 aa17.6■□□□□ 0.41
HOXC6-203ENST00000504315 FAM89AQ96GI7 184 aa17.6■□□□□ 0.41
HOXC6-203ENST00000504315 L3MBTL3Q96JM7 780 aaPredicted RBP17.6■□□□□ 0.41
HOXC6-203ENST00000504315 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
HOXC6-203ENST00000504315 ZNF521Q96K83 1311 aa17.6■□□□□ 0.41
HOXC6-203ENST00000504315 DUOX1Q9NRD9 1551 aa17.6■□□□□ 0.41
HOXC6-203ENST00000504315 SPEF2Q9C093 1822 aa17.59■□□□□ 0.41
HOXC6-203ENST00000504315 GRAPQ13588 217 aa17.59■□□□□ 0.41
HOXC6-203ENST00000504315 KSR2Q6VAB6 950 aa17.59■□□□□ 0.41
HOXC6-203ENST00000504315 DDX46Q7L014 1031 aaKnown RBP17.59■□□□□ 0.41
HOXC6-203ENST00000504315 GRAPLQ8TC17 118 aaPredicted RBP17.59■□□□□ 0.41
HOXC6-203ENST00000504315 MYD88Q99836 296 aa17.59■□□□□ 0.41
HOXC6-203ENST00000504315 SPINK5Q9NQ38 1064 aaPredicted RBP17.59■□□□□ 0.41
HOXC6-203ENST00000504315 ZNF541Q9H0D2 1346 aa17.58■□□□□ 0.4
HOXC6-203ENST00000504315 IRS4O14654 1257 aaPredicted RBP17.58■□□□□ 0.4
HOXC6-203ENST00000504315 VAMP4O75379 141 aa17.58■□□□□ 0.4
HOXC6-203ENST00000504315 DDNO94850 711 aaPredicted RBP17.58■□□□□ 0.4
HOXC6-203ENST00000504315 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms