RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 TCHHQ07283 1943 aa13.55□□□□□ -0.24
PAPD4-207ENST00000504233 NPHP4O75161 1426 aaPredicted RBP13.55□□□□□ -0.24
PAPD4-207ENST00000504233 ERBB3P21860 1342 aa13.55□□□□□ -0.24
PAPD4-207ENST00000504233 TTC41PQ6P2S7 1318 aa13.55□□□□□ -0.24
PAPD4-207ENST00000504233 ZNF790Q6PG37 636 aa13.55□□□□□ -0.24
PAPD4-207ENST00000504233 LRSAM1Q6UWE0 723 aa13.55□□□□□ -0.24
PAPD4-207ENST00000504233 COPS6Q7L5N1 327 aa13.55□□□□□ -0.24
PAPD4-207ENST00000504233 GPATCH3Q96I76 525 aa13.55□□□□□ -0.24
PAPD4-207ENST00000504233 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
PAPD4-207ENST00000504233 RPAP1Q9BWH6 1393 aaPredicted RBP13.55□□□□□ -0.24
PAPD4-207ENST00000504233 WDR33Q9C0J8 1336 aaKnown RBP13.55□□□□□ -0.24
PAPD4-207ENST00000504233 EPHA10Q5JZY3 1008 aa13.55□□□□□ -0.24
PAPD4-207ENST00000504233 DDX58O95786 925 aaKnown RBP13.54□□□□□ -0.24
PAPD4-207ENST00000504233 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
PAPD4-207ENST00000504233 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
PAPD4-207ENST00000504233 RGPD5Q99666 1765 aa13.54□□□□□ -0.24
PAPD4-207ENST00000504233 MBD3O95983 291 aa13.54□□□□□ -0.24
PAPD4-207ENST00000504233 NMIQ13287 307 aaPredicted RBP13.54□□□□□ -0.24
PAPD4-207ENST00000504233 ZNF496Q96IT1 587 aaPredicted RBP13.54□□□□□ -0.24
PAPD4-207ENST00000504233 SMC3Q9UQE7 1217 aa13.54□□□□□ -0.24
PAPD4-207ENST00000504233 FIBPO43427 364 aa13.53□□□□□ -0.24
PAPD4-207ENST00000504233 OFD1O75665 1012 aa13.53□□□□□ -0.24
PAPD4-207ENST00000504233 SYT1P21579 422 aa13.53□□□□□ -0.24
PAPD4-207ENST00000504233 RUFY2Q8WXA3 655 aa13.53□□□□□ -0.24
PAPD4-207ENST00000504233 TRERF1Q96PN7 1200 aa13.53□□□□□ -0.24
PAPD4-207ENST00000504233 PDRG1Q9NUG6 133 aa13.53□□□□□ -0.24
PAPD4-207ENST00000504233 USP16Q9Y5T5 823 aa13.53□□□□□ -0.24
PAPD4-207ENST00000504233 ATP5J2-PTCD1G3V325 749 aa13.53□□□□□ -0.24
PAPD4-207ENST00000504233 PTCD1O75127 700 aaKnown RBP13.53□□□□□ -0.24
PAPD4-207ENST00000504233 ERC1Q8IUD2 1116 aa13.53□□□□□ -0.24
PAPD4-207ENST00000504233 USP42Q9H9J4 1324 aaKnown RBP13.53□□□□□ -0.24
PAPD4-207ENST00000504233 FSD1Q9BTV5 496 aa13.53□□□□□ -0.24
PAPD4-207ENST00000504233 RBM8AQ9Y5S9 174 aaKnown RBP13.53□□□□□ -0.24
PAPD4-207ENST00000504233 TAF6LQ9Y6J9 622 aa13.53□□□□□ -0.24
PAPD4-207ENST00000504233 HEG1Q9ULI3 1381 aa13.52□□□□□ -0.24
PAPD4-207ENST00000504233 A0A0D9SFI3 127 aa13.52□□□□□ -0.24
PAPD4-207ENST00000504233 CHGBP05060 677 aa13.52□□□□□ -0.24
PAPD4-207ENST00000504233 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.52□□□□□ -0.24
PAPD4-207ENST00000504233 IL17RAQ96F46 866 aa13.52□□□□□ -0.24
PAPD4-207ENST00000504233 SLC52A2Q9HAB3 445 aa13.52□□□□□ -0.24
PAPD4-207ENST00000504233 NCAPD2Q15021 1401 aa13.52□□□□□ -0.24
PAPD4-207ENST00000504233 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
PAPD4-207ENST00000504233 STX6O43752 255 aa13.52□□□□□ -0.25
PAPD4-207ENST00000504233 NEXNQ0ZGT2 675 aa13.52□□□□□ -0.25
PAPD4-207ENST00000504233 EVI5LQ96CN4 794 aa13.52□□□□□ -0.25
PAPD4-207ENST00000504233 NEURL1BA8MQ27 555 aa13.51□□□□□ -0.25
PAPD4-207ENST00000504233 ZSCAN22P10073 491 aaPredicted RBP13.51□□□□□ -0.25
PAPD4-207ENST00000504233 TATP17735 454 aaPredicted RBP13.51□□□□□ -0.25
PAPD4-207ENST00000504233 GJB2P29033 226 aa13.51□□□□□ -0.25
PAPD4-207ENST00000504233 CCDC171Q6TFL3 1326 aa13.51□□□□□ -0.25
PAPD4-207ENST00000504233 VPS37CA5D8V6 355 aaPredicted RBP13.51□□□□□ -0.25
PAPD4-207ENST00000504233 PHKG2P15735 406 aa13.51□□□□□ -0.25
PAPD4-207ENST00000504233 KDM6AO15550 1401 aaPredicted RBP13.51□□□□□ -0.25
PAPD4-207ENST00000504233 CREB3L3Q68CJ9 461 aa13.5□□□□□ -0.25
PAPD4-207ENST00000504233 LARP1Q6PKG0 1096 aaKnown RBP13.5□□□□□ -0.25
PAPD4-207ENST00000504233 UBE3BQ7Z3V4 1068 aa13.5□□□□□ -0.25
PAPD4-207ENST00000504233 CYP46A1Q9Y6A2 500 aa13.5□□□□□ -0.25
PAPD4-207ENST00000504233 GCKRQ14397 625 aa13.5□□□□□ -0.25
PAPD4-207ENST00000504233 ZBTB9Q96C00 473 aa13.5□□□□□ -0.25
PAPD4-207ENST00000504233 TSPY26PQ9H489 355 aa13.5□□□□□ -0.25
PAPD4-207ENST00000504233 CGNQ9P2M7 1197 aaKnown RBP13.5□□□□□ -0.25
PAPD4-207ENST00000504233 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.5□□□□□ -0.25
PAPD4-207ENST00000504233 SLIT3O75094 1523 aa13.5□□□□□ -0.25
PAPD4-207ENST00000504233 ME3Q16798 604 aa13.5□□□□□ -0.25
PAPD4-207ENST00000504233 C1orf167Q5SNV9 1468 aa13.49□□□□□ -0.25
PAPD4-207ENST00000504233 EPB41L2O43491 1005 aaKnown RBP13.49□□□□□ -0.25
PAPD4-207ENST00000504233 ZKSCAN1P17029 563 aaPredicted RBP13.49□□□□□ -0.25
PAPD4-207ENST00000504233 ST3GAL1Q11201 340 aa13.49□□□□□ -0.25
PAPD4-207ENST00000504233 ZNF589Q86UQ0 364 aaPredicted RBP13.49□□□□□ -0.25
PAPD4-207ENST00000504233 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
PAPD4-207ENST00000504233 DNM1Q05193 864 aaKnown RBP13.49□□□□□ -0.25
PAPD4-207ENST00000504233 NECTIN1Q15223 517 aa13.49□□□□□ -0.25
PAPD4-207ENST00000504233 FERMT3Q86UX7 667 aa13.49□□□□□ -0.25
PAPD4-207ENST00000504233 C19orf44Q9H6X5 657 aa13.49□□□□□ -0.25
PAPD4-207ENST00000504233 HDAC5Q9UQL6 1122 aa13.49□□□□□ -0.25
PAPD4-207ENST00000504233 CHMP3Q9Y3E7 222 aa13.49□□□□□ -0.25
PAPD4-207ENST00000504233 MEGF6O75095 1541 aa13.48□□□□□ -0.25
PAPD4-207ENST00000504233 CYP27B1O15528 508 aa13.48□□□□□ -0.25
PAPD4-207ENST00000504233 F13A1P00488 732 aa13.48□□□□□ -0.25
PAPD4-207ENST00000504233 STK3Q13188 491 aa13.48□□□□□ -0.25
PAPD4-207ENST00000504233 ANKRD13DQ6ZTN6 518 aa13.48□□□□□ -0.25
PAPD4-207ENST00000504233 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.48□□□□□ -0.25
PAPD4-207ENST00000504233 TPCN1Q9ULQ1 816 aa13.48□□□□□ -0.25
PAPD4-207ENST00000504233 SLC27A2O14975 620 aa13.48□□□□□ -0.25
PAPD4-207ENST00000504233 ATF3P18847 181 aa13.48□□□□□ -0.25
PAPD4-207ENST00000504233 PPP4R3BQ5MIZ7 849 aa13.48□□□□□ -0.25
PAPD4-207ENST00000504233 FAM173BQ6P4H8 233 aa13.48□□□□□ -0.25
PAPD4-207ENST00000504233 SYAP1Q96A49 352 aaPredicted RBP13.48□□□□□ -0.25
PAPD4-207ENST00000504233 METTL22Q9BUU2 404 aaPredicted RBP13.48□□□□□ -0.25
PAPD4-207ENST00000504233 ZSWIM6Q9HCJ5 1215 aa13.48□□□□□ -0.25
PAPD4-207ENST00000504233 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.47□□□□□ -0.25
PAPD4-207ENST00000504233 TFCP2Q12800 502 aa13.47□□□□□ -0.25
PAPD4-207ENST00000504233 DNAJC2Q99543 621 aaKnown RBP13.47□□□□□ -0.25
PAPD4-207ENST00000504233 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
PAPD4-207ENST00000504233 VPS53Q5VIR6 699 aa13.47□□□□□ -0.25
PAPD4-207ENST00000504233 CCDC129Q6ZRS4 1044 aa13.47□□□□□ -0.25
PAPD4-207ENST00000504233 IFNL2Q8IZJ0 200 aa13.47□□□□□ -0.25
PAPD4-207ENST00000504233 PDLIM2Q96JY6 352 aa13.47□□□□□ -0.25
PAPD4-207ENST00000504233 TTC12Q9H892 705 aaPredicted RBP13.47□□□□□ -0.25
PAPD4-207ENST00000504233 UTYO14607 1347 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms