RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 CC2D2BQ6DHV5 1058 aa28.21■■■□□ 2.11
RNF4-205ENST00000504224 RBM17Q96I25 401 aaKnown RBP28.21■■■□□ 2.11
RNF4-205ENST00000504224 PSMD1Q99460 953 aa28.21■■■□□ 2.11
RNF4-205ENST00000504224 CLEC11AQ9Y240 323 aa28.21■■■□□ 2.11
RNF4-205ENST00000504224 ANXA1P04083 346 aa28.2■■■□□ 2.1
RNF4-205ENST00000504224 HSPA1AP0DMV8 641 aaKnown RBP28.2■■■□□ 2.1
RNF4-205ENST00000504224 HSPA1BP0DMV9 641 aaKnown RBP28.2■■■□□ 2.1
RNF4-205ENST00000504224 HOXA10P31260 410 aaPredicted RBP28.2■■■□□ 2.1
RNF4-205ENST00000504224 MKRN1Q9UHC7 482 aaKnown RBP28.2■■■□□ 2.1
RNF4-205ENST00000504224 FZD9O00144 591 aa28.19■■■□□ 2.1
RNF4-205ENST00000504224 NEUROD2Q15784 382 aa28.19■■■□□ 2.1
RNF4-205ENST00000504224 PARP10Q53GL7 1025 aa28.19■■■□□ 2.1
RNF4-205ENST00000504224 NECTIN2Q92692 538 aa28.19■■■□□ 2.1
RNF4-205ENST00000504224 RNF123Q5XPI4 1314 aa28.18■■■□□ 2.1
RNF4-205ENST00000504224 EPHX2P34913 555 aa28.18■■■□□ 2.1
RNF4-205ENST00000504224 DDX10Q13206 875 aaKnown RBP28.18■■■□□ 2.1
RNF4-205ENST00000504224 PDIA6Q15084 440 aa28.18■■■□□ 2.1
RNF4-205ENST00000504224 PROSER3Q2NL68 480 aa28.18■■■□□ 2.1
RNF4-205ENST00000504224 CCDC146Q8IYE0 955 aa28.18■■■□□ 2.1
RNF4-205ENST00000504224 RIC1Q4ADV7 1423 aa28.18■■■□□ 2.1
RNF4-205ENST00000504224 PPEF1O14829 653 aaPredicted RBP28.17■■■□□ 2.1
RNF4-205ENST00000504224 C3orf67Q6ZVT6 689 aa28.17■■■□□ 2.1
RNF4-205ENST00000504224 CRAMP1Q96RY5 1269 aa28.17■■■□□ 2.1
RNF4-205ENST00000504224 BABAM1Q9NWV8 329 aa28.17■■■□□ 2.1
RNF4-205ENST00000504224 SCN4AP35499 1836 aa28.17■■■□□ 2.1
RNF4-205ENST00000504224 EIF6P56537 245 aaKnown RBP28.16■■■□□ 2.1
RNF4-205ENST00000504224 LRP10Q7Z4F1 713 aa28.16■■■□□ 2.1
RNF4-205ENST00000504224 NLRP3Q96P20 1036 aa28.16■■■□□ 2.1
RNF4-205ENST00000504224 UTP14AQ9BVJ6 771 aaKnown RBP28.16■■■□□ 2.1
RNF4-205ENST00000504224 GJA3Q9Y6H8 435 aa28.16■■■□□ 2.1
RNF4-205ENST00000504224 AIMP1Q12904 312 aaKnown RBP28.15■■■□□ 2.1
RNF4-205ENST00000504224 GPC2Q8N158 579 aa28.15■■■□□ 2.1
RNF4-205ENST00000504224 LARGE2Q8N3Y3 721 aa28.15■■■□□ 2.1
RNF4-205ENST00000504224 SNED1Q8TER0 1413 aa28.15■■■□□ 2.1
RNF4-205ENST00000504224 MYBBP1AQ9BQG0 1328 aaKnown RBP28.15■■■□□ 2.1
RNF4-205ENST00000504224 ZEB1P37275 1124 aaPredicted RBP28.14■■■□□ 2.1
RNF4-205ENST00000504224 GRIPAP1Q4V328 841 aa28.14■■■□□ 2.1
RNF4-205ENST00000504224 SLC51AQ86UW1 340 aa28.14■■■□□ 2.1
RNF4-205ENST00000504224 TMX4Q9H1E5 349 aaPredicted RBP28.14■■■□□ 2.1
RNF4-205ENST00000504224 LAS1LQ9Y4W2 734 aaKnown RBP28.14■■■□□ 2.1
RNF4-205ENST00000504224 PASKQ96RG2 1323 aa28.14■■■□□ 2.09
RNF4-205ENST00000504224 COPS6Q7L5N1 327 aa28.13■■■□□ 2.09
RNF4-205ENST00000504224 PNMA8AQ86V59 439 aaPredicted RBP28.13■■■□□ 2.09
RNF4-205ENST00000504224 TNS4Q8IZW8 715 aa28.13■■■□□ 2.09
RNF4-205ENST00000504224 WDR43Q15061 677 aaKnown RBP eCLIP28.12■■■□□ 2.09
RNF4-205ENST00000504224 XAGE3Q8WTP9 111 aa28.12■■■□□ 2.09
RNF4-205ENST00000504224 ITGBL1O95965 494 aaPredicted RBP28.11■■■□□ 2.09
RNF4-205ENST00000504224 TMEM88BA6NKF7 163 aa28.1■■■□□ 2.09
RNF4-205ENST00000504224 LMOD1P29536 600 aaPredicted RBP28.1■■■□□ 2.09
RNF4-205ENST00000504224 HSP90AB3PQ58FF7 597 aa28.1■■■□□ 2.09
RNF4-205ENST00000504224 CAPN15O75808 1086 aa28.09■■■□□ 2.09
RNF4-205ENST00000504224 KRT24Q2M2I5 525 aa28.09■■■□□ 2.09
RNF4-205ENST00000504224 SLC10A5Q5PT55 438 aa28.09■■■□□ 2.09
RNF4-205ENST00000504224 MAP1SQ66K74 1059 aaPredicted RBP28.09■■■□□ 2.09
RNF4-205ENST00000504224 NIM1KQ8IY84 436 aa28.09■■■□□ 2.09
RNF4-205ENST00000504224 RUNDC1Q96C34 613 aa28.09■■■□□ 2.09
RNF4-205ENST00000504224 COL4A5P29400 1685 aa28.09■■■□□ 2.09
RNF4-205ENST00000504224 CNTNAP1P78357 1384 aa28.09■■■□□ 2.09
RNF4-205ENST00000504224 PCNTO95613 3336 aa28.08■■■□□ 2.09
RNF4-205ENST00000504224 PPIP5K2O43314 1243 aa28.08■■■□□ 2.09
RNF4-205ENST00000504224 CNTROBQ8N137 903 aa28.08■■■□□ 2.09
RNF4-205ENST00000504224 HCLS1P14317 486 aaPredicted RBP28.07■■■□□ 2.08
RNF4-205ENST00000504224 NLRP10Q86W26 655 aa28.07■■■□□ 2.08
RNF4-205ENST00000504224 DDX21Q9NR30 783 aaKnown RBP eCLIP28.07■■■□□ 2.08
RNF4-205ENST00000504224 ATP6V0A2Q9Y487 856 aa28.07■■■□□ 2.08
RNF4-205ENST00000504224 CHL1O00533 1208 aa28.06■■■□□ 2.08
RNF4-205ENST00000504224 TRMT112Q9UI30 125 aaKnown RBP28.06■■■□□ 2.08
RNF4-205ENST00000504224 ABCC4O15439 1325 aa28.06■■■□□ 2.08
RNF4-205ENST00000504224 TCIRG1Q13488 830 aa28.05■■■□□ 2.08
RNF4-205ENST00000504224 AOC3Q16853 763 aa28.05■■■□□ 2.08
RNF4-205ENST00000504224 TRIM35Q9UPQ4 493 aa28.05■■■□□ 2.08
RNF4-205ENST00000504224 ZNF428Q96B54 188 aa28.04■■■□□ 2.08
RNF4-205ENST00000504224 CHPF2Q9P2E5 772 aa28.04■■■□□ 2.08
RNF4-205ENST00000504224 EPS15P42566 896 aa28.03■■■□□ 2.08
RNF4-205ENST00000504224 HDGFL1Q5TGJ6 251 aa28.03■■■□□ 2.08
RNF4-205ENST00000504224 ADAMTSL1Q8N6G6 1762 aa28.02■■■□□ 2.08
RNF4-205ENST00000504224 SH3TC1Q8TE82 1336 aa28.02■■■□□ 2.08
RNF4-205ENST00000504224 BBOX1O75936 387 aa28.02■■■□□ 2.08
RNF4-205ENST00000504224 VEGFBP49765 207 aa28.02■■■□□ 2.08
RNF4-205ENST00000504224 SCNN1DP51172 638 aa28.02■■■□□ 2.08
RNF4-205ENST00000504224 DDX46Q7L014 1031 aaKnown RBP28.02■■■□□ 2.08
RNF4-205ENST00000504224 SUPT20HQ8NEM7 779 aa28.02■■■□□ 2.08
RNF4-205ENST00000504224 ADAMTS8Q9UP79 889 aa28.02■■■□□ 2.08
RNF4-205ENST00000504224 DPP8Q6V1X1 898 aaPredicted RBP28.01■■■□□ 2.07
RNF4-205ENST00000504224 SP8Q8IXZ3 490 aa27.99■■■□□ 2.07
RNF4-205ENST00000504224 MPNDQ8N594 471 aa27.99■■■□□ 2.07
RNF4-205ENST00000504224 VPS33BQ9H267 617 aa27.99■■■□□ 2.07
RNF4-205ENST00000504224 ABT1Q9ULW3 272 aaKnown RBP27.99■■■□□ 2.07
RNF4-205ENST00000504224 ANKRD36CQ5JPF3 1778 aa27.99■■■□□ 2.07
RNF4-205ENST00000504224 GRAPQ13588 217 aa27.98■■■□□ 2.07
RNF4-205ENST00000504224 GRAPLQ8TC17 118 aaPredicted RBP27.98■■■□□ 2.07
RNF4-205ENST00000504224 AIDAQ96BJ3 306 aa27.98■■■□□ 2.07
RNF4-205ENST00000504224 ZNRF3Q9ULT6 936 aa27.98■■■□□ 2.07
RNF4-205ENST00000504224 FOXN1O15353 648 aa27.97■■■□□ 2.07
RNF4-205ENST00000504224 DEFB115Q30KQ5 88 aa27.97■■■□□ 2.07
RNF4-205ENST00000504224 PLBD2Q8NHP8 589 aa27.97■■■□□ 2.07
RNF4-205ENST00000504224 RTFDC1Q9BY42 306 aaPredicted RBP27.97■■■□□ 2.07
RNF4-205ENST00000504224 LTBP1Q14766 1721 aa27.97■■■□□ 2.07
RNF4-205ENST00000504224 HOXB7P09629 217 aa27.96■■■□□ 2.07
RNF4-205ENST00000504224 ANKRD13DQ6ZTN6 518 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms