RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 VAC14Q08AM6 782 aa5.38□□□□□ -1.55
HMGB1P35-201ENST00000503360 STAG2Q8N3U4 1231 aa5.38□□□□□ -1.55
HMGB1P35-201ENST00000503360 CHMP3Q9Y3E7 222 aa5.38□□□□□ -1.55
HMGB1P35-201ENST00000503360 RGS9O75916 674 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P35-201ENST00000503360 CD97P48960 835 aa5.37□□□□□ -1.55
HMGB1P35-201ENST00000503360 NEUROD2Q15784 382 aa5.37□□□□□ -1.55
HMGB1P35-201ENST00000503360 IER5Q5VY09 327 aa5.37□□□□□ -1.55
HMGB1P35-201ENST00000503360 MSL1Q68DK7 614 aa5.37□□□□□ -1.55
HMGB1P35-201ENST00000503360 PRR23CQ6ZRP0 262 aa5.37□□□□□ -1.55
HMGB1P35-201ENST00000503360 DZIP1LQ8IYY4 767 aaKnown RBP5.37□□□□□ -1.55
HMGB1P35-201ENST00000503360 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB1P35-201ENST00000503360 UBE2OQ9C0C9 1292 aaKnown RBP5.37□□□□□ -1.55
HMGB1P35-201ENST00000503360 MAP3K6O95382 1288 aa5.36□□□□□ -1.55
HMGB1P35-201ENST00000503360 NOS3P29474 1203 aa5.36□□□□□ -1.55
HMGB1P35-201ENST00000503360 PSAPL1Q6NUJ1 521 aa5.36□□□□□ -1.55
HMGB1P35-201ENST00000503360 TRIM50Q86XT4 487 aa5.36□□□□□ -1.55
HMGB1P35-201ENST00000503360 BHMTQ93088 406 aa5.36□□□□□ -1.55
HMGB1P35-201ENST00000503360 SUSD3Q96L08 255 aa5.36□□□□□ -1.55
HMGB1P35-201ENST00000503360 PCMTD2Q9NV79 361 aa5.36□□□□□ -1.55
HMGB1P35-201ENST00000503360 DNAJB12Q9NXW2 375 aaKnown RBP5.36□□□□□ -1.55
HMGB1P35-201ENST00000503360 SFI1A8K8P3 1242 aa5.35□□□□□ -1.55
HMGB1P35-201ENST00000503360 GSC2O15499 205 aa5.35□□□□□ -1.55
HMGB1P35-201ENST00000503360 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
HMGB1P35-201ENST00000503360 RAB44Q7Z6P3 723 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P35-201ENST00000503360 DMRTC2Q8IXT2 367 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P35-201ENST00000503360 TMEM130Q8N3G9 435 aa5.35□□□□□ -1.55
HMGB1P35-201ENST00000503360 GAS2L2Q8NHY3 880 aa5.35□□□□□ -1.55
HMGB1P35-201ENST00000503360 DCAF11Q8TEB1 546 aa5.35□□□□□ -1.55
HMGB1P35-201ENST00000503360 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
HMGB1P35-201ENST00000503360 KIAA1324LA8MWY0 1029 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P35-201ENST00000503360 COBLO75128 1261 aa5.34□□□□□ -1.55
HMGB1P35-201ENST00000503360 IREB2P48200 963 aaKnown RBP5.34□□□□□ -1.55
HMGB1P35-201ENST00000503360 IRAK1P51617 712 aa5.34□□□□□ -1.55
HMGB1P35-201ENST00000503360 PSME1Q06323 249 aa5.34□□□□□ -1.55
HMGB1P35-201ENST00000503360 BTLAQ7Z6A9 289 aa5.34□□□□□ -1.55
HMGB1P35-201ENST00000503360 TNS4Q8IZW8 715 aa5.34□□□□□ -1.55
HMGB1P35-201ENST00000503360 GSX2Q9BZM3 304 aa5.34□□□□□ -1.55
HMGB1P35-201ENST00000503360 PHACTR1Q9C0D0 580 aa5.34□□□□□ -1.55
HMGB1P35-201ENST00000503360 SRA1Q9HD15 236 aaKnown RBP5.34□□□□□ -1.55
HMGB1P35-201ENST00000503360 NAGPAQ9UK23 515 aa5.34□□□□□ -1.55
HMGB1P35-201ENST00000503360 FSTP19883 344 aa5.33□□□□□ -1.56
HMGB1P35-201ENST00000503360 ATP1A2P50993 1020 aa5.33□□□□□ -1.56
HMGB1P35-201ENST00000503360 CCINQ13939 588 aa5.33□□□□□ -1.56
HMGB1P35-201ENST00000503360 GRIK5Q16478 980 aa5.33□□□□□ -1.56
HMGB1P35-201ENST00000503360 SH3PXD2AQ5TCZ1 1133 aa5.33□□□□□ -1.56
HMGB1P35-201ENST00000503360 Q6ZS46 218 aa5.33□□□□□ -1.56
HMGB1P35-201ENST00000503360 NUDT8Q8WV74 236 aa5.33□□□□□ -1.56
HMGB1P35-201ENST00000503360 HSH2DQ96JZ2 352 aa5.33□□□□□ -1.56
HMGB1P35-201ENST00000503360 MEGF10Q96KG7 1140 aa5.33□□□□□ -1.56
HMGB1P35-201ENST00000503360 ALG2Q9H553 416 aa5.33□□□□□ -1.56
HMGB1P35-201ENST00000503360 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P35-201ENST00000503360 DLL1O00548 723 aa5.32□□□□□ -1.56
HMGB1P35-201ENST00000503360 SKIP12755 728 aa5.32□□□□□ -1.56
HMGB1P35-201ENST00000503360 BRPF1P55201 1214 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P35-201ENST00000503360 NCOA4Q13772 614 aa5.32□□□□□ -1.56
HMGB1P35-201ENST00000503360 PLEKHM2Q8IWE5 1019 aa5.32□□□□□ -1.56
HMGB1P35-201ENST00000503360 ZNF280CQ8ND82 737 aa5.32□□□□□ -1.56
HMGB1P35-201ENST00000503360 GDPD2Q9HCC8 539 aa5.32□□□□□ -1.56
HMGB1P35-201ENST00000503360 PIK3CDO00329 1044 aa5.31□□□□□ -1.56
HMGB1P35-201ENST00000503360 ZBTB7BO15156 539 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P35-201ENST00000503360 ABL2P42684 1182 aa5.31□□□□□ -1.56
HMGB1P35-201ENST00000503360 WFDC8Q8IUA0 241 aa5.31□□□□□ -1.56
HMGB1P35-201ENST00000503360 MAP4K3Q8IVH8 894 aa5.31□□□□□ -1.56
HMGB1P35-201ENST00000503360 LARGE2Q8N3Y3 721 aa5.31□□□□□ -1.56
HMGB1P35-201ENST00000503360 TRPM4Q8TD43 1214 aa5.31□□□□□ -1.56
HMGB1P35-201ENST00000503360 LPIN3Q9BQK8 851 aa5.31□□□□□ -1.56
HMGB1P35-201ENST00000503360 TSPAN10Q9H1Z9 355 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P35-201ENST00000503360 USP17L5A8MUK1 530 aa5.3□□□□□ -1.56
HMGB1P35-201ENST00000503360 TGFBR3LH3BV60 316 aa5.3□□□□□ -1.56
HMGB1P35-201ENST00000503360 EPB42P16452 691 aa5.3□□□□□ -1.56
HMGB1P35-201ENST00000503360 TBCELQ5QJ74 424 aa5.3□□□□□ -1.56
HMGB1P35-201ENST00000503360 ALDH16A1Q8IZ83 802 aa5.3□□□□□ -1.56
HMGB1P35-201ENST00000503360 PNMA5Q96PV4 448 aa5.3□□□□□ -1.56
HMGB1P35-201ENST00000503360 MRPL18Q9H0U6 180 aaKnown RBP5.3□□□□□ -1.56
HMGB1P35-201ENST00000503360 AKTIPQ9H8T0 292 aa5.3□□□□□ -1.56
HMGB1P35-201ENST00000503360 HCN4Q9Y3Q4 1203 aa5.3□□□□□ -1.56
HMGB1P35-201ENST00000503360 ARID4AP29374 1257 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P35-201ENST00000503360 GPLD1P80108 840 aa5.29□□□□□ -1.56
HMGB1P35-201ENST00000503360 TBC1D8BQ0IIM8 1120 aa5.29□□□□□ -1.56
HMGB1P35-201ENST00000503360 CCDC102BQ68D86 513 aa5.29□□□□□ -1.56
HMGB1P35-201ENST00000503360 INTS5Q6P9B9 1019 aaKnown RBP5.29□□□□□ -1.56
HMGB1P35-201ENST00000503360 FAM35AQ86V20 835 aa5.29□□□□□ -1.56
HMGB1P35-201ENST00000503360 CACTIN-AS1Q8N1I8 211 aa5.29□□□□□ -1.56
HMGB1P35-201ENST00000503360 TPCN2Q8NHX9 752 aa5.29□□□□□ -1.56
HMGB1P35-201ENST00000503360 C2orf49Q9BVC5 232 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P35-201ENST00000503360 DMGDHQ9UI17 866 aaKnown RBP5.29□□□□□ -1.56
HMGB1P35-201ENST00000503360 PALM3A6NDB9 673 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P35-201ENST00000503360 DEAF1O75398 565 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P35-201ENST00000503360 TAL1P17542 331 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P35-201ENST00000503360 NFKB1P19838 968 aa5.28□□□□□ -1.56
HMGB1P35-201ENST00000503360 FZD5Q13467 585 aa5.28□□□□□ -1.56
HMGB1P35-201ENST00000503360 RTN1Q16799 776 aa5.28□□□□□ -1.56
HMGB1P35-201ENST00000503360 SIX5Q8N196 739 aa5.28□□□□□ -1.56
HMGB1P35-201ENST00000503360 F8W735 103 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P35-201ENST00000503360 PPP1R12BO60237 982 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P35-201ENST00000503360 PTCD1O75127 700 aaKnown RBP5.27□□□□□ -1.57
HMGB1P35-201ENST00000503360 NRLP54845 237 aa5.27□□□□□ -1.57
HMGB1P35-201ENST00000503360 GP2P55259 537 aaKnown RBP5.27□□□□□ -1.57
HMGB1P35-201ENST00000503360 PERM1Q5SV97 790 aa5.27□□□□□ -1.57
HMGB1P35-201ENST00000503360 ELMSAN1Q6PJG2 1045 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms