RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 BLOC1S2Q6QNY1 142 aa8.82□□□□□ -1
PDGFC-203ENST00000502773 TMX3Q96JJ7 454 aa8.82□□□□□ -1
PDGFC-203ENST00000502773 DHX16O60231 1041 aaKnown RBP8.82□□□□□ -1
PDGFC-203ENST00000502773 MYL6BP14649 208 aa8.82□□□□□ -1
PDGFC-203ENST00000502773 ATP5JP18859 108 aa8.82□□□□□ -1
PDGFC-203ENST00000502773 CHMP3Q9Y3E7 222 aa8.82□□□□□ -1
PDGFC-203ENST00000502773 SALL3Q9BXA9 1300 aa8.82□□□□□ -1
PDGFC-203ENST00000502773 NBPF7P0C2Y1 421 aaPredicted RBP8.82□□□□□ -1
PDGFC-203ENST00000502773 MCTP1Q6DN14 999 aa8.82□□□□□ -1
PDGFC-203ENST00000502773 CIAO1O76071 339 aa8.81□□□□□ -1
PDGFC-203ENST00000502773 ZNF771Q7L3S4 317 aaPredicted RBP8.81□□□□□ -1
PDGFC-203ENST00000502773 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.81□□□□□ -1
PDGFC-203ENST00000502773 AK7Q96M32 723 aa8.81□□□□□ -1
PDGFC-203ENST00000502773 GRPEL1Q9HAV7 217 aa8.81□□□□□ -1
PDGFC-203ENST00000502773 ADCY9O60503 1353 aa8.81□□□□□ -1
PDGFC-203ENST00000502773 PTMAP06454 111 aaKnown RBP8.81□□□□□ -1
PDGFC-203ENST00000502773 DDIT3P35638 169 aa8.81□□□□□ -1
PDGFC-203ENST00000502773 CWC27Q6UX04 472 aaKnown RBP8.81□□□□□ -1
PDGFC-203ENST00000502773 ALDH8A1Q9H2A2 487 aaPredicted RBP8.81□□□□□ -1
PDGFC-203ENST00000502773 HELLSQ9NRZ9 838 aa8.81□□□□□ -1
PDGFC-203ENST00000502773 TPM3P06753 285 aa8.8□□□□□ -1
PDGFC-203ENST00000502773 TTF1Q15361 905 aaPredicted RBP8.8□□□□□ -1
PDGFC-203ENST00000502773 CPLX2Q6PUV4 134 aaKnown RBP8.8□□□□□ -1
PDGFC-203ENST00000502773 RBM33Q96EV2 1170 aaKnown RBP8.8□□□□□ -1
PDGFC-203ENST00000502773 SOS2Q07890 1332 aaPredicted RBP8.8□□□□□ -1
PDGFC-203ENST00000502773 ZNF496Q96IT1 587 aaPredicted RBP8.8□□□□□ -1
PDGFC-203ENST00000502773 BICC1Q9H694 974 aaKnown RBP8.8□□□□□ -1
PDGFC-203ENST00000502773 KIF2CQ99661 725 aa8.8□□□□□ -1
PDGFC-203ENST00000502773 ABCC12Q96J65 1359 aa8.8□□□□□ -1
PDGFC-203ENST00000502773 EXOC5O00471 708 aa8.8□□□□□ -1
PDGFC-203ENST00000502773 HS1BP3Q53T59 392 aa8.8□□□□□ -1
PDGFC-203ENST00000502773 OTUD7AQ8TE49 926 aaPredicted RBP8.8□□□□□ -1
PDGFC-203ENST00000502773 HMGN5P82970 282 aaKnown RBP8.79□□□□□ -1
PDGFC-203ENST00000502773 TRIM28Q13263 835 aaKnown RBP8.79□□□□□ -1
PDGFC-203ENST00000502773 ATL3Q6DD88 541 aa8.79□□□□□ -1
PDGFC-203ENST00000502773 FOXD4L1Q9NU39 408 aa8.79□□□□□ -1
PDGFC-203ENST00000502773 CCDC171Q6TFL3 1326 aa8.79□□□□□ -1
PDGFC-203ENST00000502773 UVSSAQ2YD98 709 aa8.79□□□□□ -1
PDGFC-203ENST00000502773 BRINP3Q76B58 766 aa8.79□□□□□ -1
PDGFC-203ENST00000502773 PI4K2BQ8TCG2 481 aa8.79□□□□□ -1
PDGFC-203ENST00000502773 SMARCC1Q92922 1105 aaPredicted RBP8.79□□□□□ -1
PDGFC-203ENST00000502773 SUCLG2Q96I99 432 aa8.79□□□□□ -1
PDGFC-203ENST00000502773 RABL6Q3YEC7 729 aaPredicted RBP8.79□□□□□ -1
PDGFC-203ENST00000502773 MCMDC2Q4G0Z9 681 aa8.79□□□□□ -1
PDGFC-203ENST00000502773 JAKMIP1Q96N16 626 aaKnown RBP8.79□□□□□ -1
PDGFC-203ENST00000502773 PDCL3Q9H2J4 239 aa8.79□□□□□ -1
PDGFC-203ENST00000502773 TBC1D2BQ9UPU7 963 aa8.79□□□□□ -1
PDGFC-203ENST00000502773 KDM3BQ7LBC6 1761 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 CAVIN2O95810 425 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 SCAND2PQ9GZW5 306 aaPredicted RBP8.78□□□□□ -1
PDGFC-203ENST00000502773 AXIN2Q9Y2T1 843 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 THRAP3Q9Y2W1 955 aaKnown RBP8.78□□□□□ -1
PDGFC-203ENST00000502773 ADRA2BP18089 450 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 CASTP20810 708 aaKnown RBP8.78□□□□□ -1
PDGFC-203ENST00000502773 ZNF445P59923 1031 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 TRDNQ13061 729 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 DHX8Q14562 1220 aaKnown RBP8.78□□□□□ -1
PDGFC-203ENST00000502773 CAMTA1Q9Y6Y1 1673 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 GOLGA6L6A8MZA4 724 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 KCNQ3O43525 872 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 UQCRFS1P1P0C7P4 283 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 SSFA2P28290 1259 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 NASPP49321 788 aaPredicted RBP8.78□□□□□ -1
PDGFC-203ENST00000502773 IFIT5Q13325 482 aaKnown RBP8.78□□□□□ -1
PDGFC-203ENST00000502773 CWF19L2Q2TBE0 894 aaKnown RBP8.78□□□□□ -1
PDGFC-203ENST00000502773 RUFY3Q7L099 469 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 UBE3BQ7Z3V4 1068 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 HOMEZQ8IX15 550 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 ZNF652Q9Y2D9 606 aa8.78□□□□□ -1
PDGFC-203ENST00000502773 N4BP2Q86UW6 1770 aaPredicted RBP8.78□□□□□ -1
PDGFC-203ENST00000502773 KRT85P78386 507 aa8.77□□□□□ -1
PDGFC-203ENST00000502773 TNNI3KQ59H18 835 aa8.77□□□□□ -1
PDGFC-203ENST00000502773 TTC39AQ5SRH9 613 aa8.77□□□□□ -1
PDGFC-203ENST00000502773 NEUROD6Q96NK8 337 aa8.77□□□□□ -1
PDGFC-203ENST00000502773 LLPHQ9BRT6 129 aaKnown RBP8.77□□□□□ -1
PDGFC-203ENST00000502773 CFAP45Q9UL16 551 aa8.77□□□□□ -1
PDGFC-203ENST00000502773 FPGT-TNNI3KV9GXZ4 949 aa8.77□□□□□ -1
PDGFC-203ENST00000502773 H7C1W4 665 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 PRPF40AO75400 957 aaKnown RBP8.77□□□□□ -1.01
PDGFC-203ENST00000502773 BRD1O95696 1058 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 MCM5P33992 734 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 SLC39A6Q13433 755 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 ZRSR1Q15695 479 aaKnown RBP8.77□□□□□ -1.01
PDGFC-203ENST00000502773 CHRNA2Q15822 529 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 TSGA10IPQ3SY00 556 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 TMED8Q6PL24 325 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-203ENST00000502773 DDX54Q8TDD1 881 aaKnown RBP8.77□□□□□ -1.01
PDGFC-203ENST00000502773 FSD2A1L4K1 749 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 H3BQV1 296 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 EYA2O00167 538 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 IFFO2Q5TF58 517 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 RGS22Q8NE09 1264 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 CCDC34Q96HJ3 373 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 LSG1Q9H089 658 aaKnown RBP8.77□□□□□ -1.01
PDGFC-203ENST00000502773 ZSCAN16Q9H4T2 348 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-203ENST00000502773 ZSWIM6Q9HCJ5 1215 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 STRN4Q9NRL3 753 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 MRC1P22897 1456 aa8.77□□□□□ -1.01
PDGFC-203ENST00000502773 TRPM3Q9HCF6 1732 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-203ENST00000502773 IGSF3O75054 1194 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms