RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 CHL1O00533 1208 aa22.02■■□□□ 1.11
AP004609.1-201ENST00000498872 VEGFAP15692 232 aaPredicted RBP22.02■■□□□ 1.11
AP004609.1-201ENST00000498872 HTRA3P83110 453 aa22.02■■□□□ 1.11
AP004609.1-201ENST00000498872 AIMP1Q12904 312 aaKnown RBP22.02■■□□□ 1.11
AP004609.1-201ENST00000498872 DPY19L2Q6NUT2 758 aa22.02■■□□□ 1.11
AP004609.1-201ENST00000498872 ZNF34Q8IZ26 560 aa22.02■■□□□ 1.11
AP004609.1-201ENST00000498872 ANKRD36CQ5JPF3 1778 aa22.01■■□□□ 1.11
AP004609.1-201ENST00000498872 POTECB2RU33 542 aa21.99■■□□□ 1.11
AP004609.1-201ENST00000498872 NTSR2O95665 410 aa21.99■■□□□ 1.11
AP004609.1-201ENST00000498872 ALDH1B1P30837 517 aa21.99■■□□□ 1.11
AP004609.1-201ENST00000498872 CRY2Q49AN0 593 aa21.99■■□□□ 1.11
AP004609.1-201ENST00000498872 COPS6Q7L5N1 327 aa21.99■■□□□ 1.11
AP004609.1-201ENST00000498872 DDNO94850 711 aaPredicted RBP21.98■■□□□ 1.11
AP004609.1-201ENST00000498872 FSTL1Q12841 308 aa21.98■■□□□ 1.11
AP004609.1-201ENST00000498872 XAGE3Q8WTP9 111 aa21.98■■□□□ 1.11
AP004609.1-201ENST00000498872 ZNF428Q96B54 188 aa21.98■■□□□ 1.11
AP004609.1-201ENST00000498872 ZNF277Q9NRM2 450 aaPredicted RBP21.98■■□□□ 1.11
AP004609.1-201ENST00000498872 C3orf67Q6ZVT6 689 aa21.98■■□□□ 1.11
AP004609.1-201ENST00000498872 SLC51AQ86UW1 340 aa21.98■■□□□ 1.11
AP004609.1-201ENST00000498872 RPGRQ92834 1020 aaKnown RBP21.98■■□□□ 1.11
AP004609.1-201ENST00000498872 IBTKQ9P2D0 1353 aaPredicted RBP21.97■■□□□ 1.11
AP004609.1-201ENST00000498872 APAF1O14727 1248 aa21.97■■□□□ 1.11
AP004609.1-201ENST00000498872 FKBP4Q02790 459 aaKnown RBP eCLIP21.97■■□□□ 1.11
AP004609.1-201ENST00000498872 PPP1R42Q7Z4L9 355 aa21.97■■□□□ 1.11
AP004609.1-201ENST00000498872 SMC1BQ8NDV3 1235 aa21.97■■□□□ 1.11
AP004609.1-201ENST00000498872 CHPF2Q9P2E5 772 aa21.97■■□□□ 1.11
AP004609.1-201ENST00000498872 ZNF521Q96K83 1311 aa21.96■■□□□ 1.11
AP004609.1-201ENST00000498872 TCERG1O14776 1098 aaKnown RBP21.96■■□□□ 1.11
AP004609.1-201ENST00000498872 HDGFL1Q5TGJ6 251 aa21.95■■□□□ 1.1
AP004609.1-201ENST00000498872 CDCA7LQ96GN5 454 aa21.95■■□□□ 1.1
AP004609.1-201ENST00000498872 DDX21Q9NR30 783 aaKnown RBP eCLIP21.95■■□□□ 1.1
AP004609.1-201ENST00000498872 LAMB2P55268 1798 aa21.95■■□□□ 1.1
AP004609.1-201ENST00000498872 PARP10Q53GL7 1025 aa21.95■■□□□ 1.1
AP004609.1-201ENST00000498872 RTKN2Q8IZC4 609 aa21.95■■□□□ 1.1
AP004609.1-201ENST00000498872 DNAJC5GQ8N7S2 189 aa21.95■■□□□ 1.1
AP004609.1-201ENST00000498872 RIC1Q4ADV7 1423 aa21.95■■□□□ 1.1
AP004609.1-201ENST00000498872 CFAP44Q96MT7 982 aa21.94■■□□□ 1.1
AP004609.1-201ENST00000498872 UTP14AQ9BVJ6 771 aaKnown RBP21.94■■□□□ 1.1
AP004609.1-201ENST00000498872 MBIPQ9NS73 344 aa21.94■■□□□ 1.1
AP004609.1-201ENST00000498872 SYNE4Q8N205 404 aa21.93■■□□□ 1.1
AP004609.1-201ENST00000498872 PPP4R2Q9NY27 417 aa21.92■■□□□ 1.1
AP004609.1-201ENST00000498872 ZNF541Q9H0D2 1346 aa21.92■■□□□ 1.1
AP004609.1-201ENST00000498872 SNED1Q8TER0 1413 aa21.92■■□□□ 1.1
AP004609.1-201ENST00000498872 HOXA10P31260 410 aaPredicted RBP21.91■■□□□ 1.1
AP004609.1-201ENST00000498872 DUSP27Q5VZP5 1158 aa21.91■■□□□ 1.1
AP004609.1-201ENST00000498872 NLRP10Q86W26 655 aa21.91■■□□□ 1.1
AP004609.1-201ENST00000498872 RBM17Q96I25 401 aaKnown RBP21.91■■□□□ 1.1
AP004609.1-201ENST00000498872 NLRP3Q96P20 1036 aa21.91■■□□□ 1.1
AP004609.1-201ENST00000498872 RCAN3Q9UKA8 241 aa21.91■■□□□ 1.1
AP004609.1-201ENST00000498872 POTEIP0CG38 1075 aa21.91■■□□□ 1.1
AP004609.1-201ENST00000498872 POTEJP0CG39 1038 aa21.91■■□□□ 1.1
AP004609.1-201ENST00000498872 IARSP41252 1262 aaKnown RBP21.91■■□□□ 1.1
AP004609.1-201ENST00000498872 TAF1P21675 1872 aa21.9■■□□□ 1.1
AP004609.1-201ENST00000498872 ELL2O00472 640 aaPredicted RBP21.9■■□□□ 1.1
AP004609.1-201ENST00000498872 PPEF1O14829 653 aaPredicted RBP21.9■■□□□ 1.1
AP004609.1-201ENST00000498872 HCLS1P14317 486 aaPredicted RBP21.9■■□□□ 1.1
AP004609.1-201ENST00000498872 TCIRG1Q13488 830 aa21.9■■□□□ 1.1
AP004609.1-201ENST00000498872 HSP90AB3PQ58FF7 597 aa21.9■■□□□ 1.1
AP004609.1-201ENST00000498872 CRAMP1Q96RY5 1269 aa21.89■■□□□ 1.09
AP004609.1-201ENST00000498872 DBF4Q9UBU7 674 aaPredicted RBP21.89■■□□□ 1.09
AP004609.1-201ENST00000498872 TRMT112Q9UI30 125 aaKnown RBP21.89■■□□□ 1.09
AP004609.1-201ENST00000498872 COL4A5P29400 1685 aa21.89■■□□□ 1.09
AP004609.1-201ENST00000498872 HOXB7P09629 217 aa21.88■■□□□ 1.09
AP004609.1-201ENST00000498872 PCNTO95613 3336 aa21.88■■□□□ 1.09
AP004609.1-201ENST00000498872 SCN4AP35499 1836 aa21.88■■□□□ 1.09
AP004609.1-201ENST00000498872 ZNF853P0CG23 659 aa21.88■■□□□ 1.09
AP004609.1-201ENST00000498872 GOLGA2Q08379 1002 aa21.88■■□□□ 1.09
AP004609.1-201ENST00000498872 SLC10A5Q5PT55 438 aa21.88■■□□□ 1.09
AP004609.1-201ENST00000498872 PSMD1Q99460 953 aa21.88■■□□□ 1.09
AP004609.1-201ENST00000498872 ANKRD13DQ6ZTN6 518 aa21.87■■□□□ 1.09
AP004609.1-201ENST00000498872 PLBD2Q8NHP8 589 aa21.87■■□□□ 1.09
AP004609.1-201ENST00000498872 DDX60Q8IY21 1712 aaKnown RBP21.86■■□□□ 1.09
AP004609.1-201ENST00000498872 ATP5J2-PTCD1G3V325 749 aa21.86■■□□□ 1.09
AP004609.1-201ENST00000498872 RRP1P56182 461 aaKnown RBP21.86■■□□□ 1.09
AP004609.1-201ENST00000498872 IFT57Q9NWB7 429 aa21.86■■□□□ 1.09
AP004609.1-201ENST00000498872 ABCC4O15439 1325 aa21.86■■□□□ 1.09
AP004609.1-201ENST00000498872 GNAI1P63096 354 aa21.85■■□□□ 1.09
AP004609.1-201ENST00000498872 CC2D2BQ6DHV5 1058 aa21.85■■□□□ 1.09
AP004609.1-201ENST00000498872 KLRG1Q96E93 195 aa21.85■■□□□ 1.09
AP004609.1-201ENST00000498872 FZD9O00144 591 aa21.84■■□□□ 1.09
AP004609.1-201ENST00000498872 JDP2Q8WYK2 163 aa21.84■■□□□ 1.09
AP004609.1-201ENST00000498872 L3MBTL3Q96JM7 780 aaPredicted RBP21.84■■□□□ 1.09
AP004609.1-201ENST00000498872 HYPKQ9NX55 129 aa21.84■■□□□ 1.09
AP004609.1-201ENST00000498872 SH3TC1Q8TE82 1336 aa21.84■■□□□ 1.09
AP004609.1-201ENST00000498872 IQCA1LA6NCM1 817 aa21.84■■□□□ 1.09
AP004609.1-201ENST00000498872 RTL5Q5HYW3 569 aaPredicted RBP21.84■■□□□ 1.09
AP004609.1-201ENST00000498872 PHAXQ9H814 394 aaKnown RBP21.84■■□□□ 1.09
AP004609.1-201ENST00000498872 CALD1Q05682 793 aaKnown RBP21.83■■□□□ 1.08
AP004609.1-201ENST00000498872 SLFN5Q08AF3 891 aa21.83■■□□□ 1.08
AP004609.1-201ENST00000498872 EAPPQ56P03 285 aaPredicted RBP21.83■■□□□ 1.08
AP004609.1-201ENST00000498872 CHADLQ6NUI6 762 aa21.83■■□□□ 1.08
AP004609.1-201ENST00000498872 LARGE2Q8N3Y3 721 aa21.83■■□□□ 1.08
AP004609.1-201ENST00000498872 C8orf58Q8NAV2 365 aa21.83■■□□□ 1.08
AP004609.1-201ENST00000498872 TAF1DQ9H5J8 278 aaPredicted RBP21.83■■□□□ 1.08
AP004609.1-201ENST00000498872 FAM89AQ96GI7 184 aa21.82■■□□□ 1.08
AP004609.1-201ENST00000498872 ATP6V0A2Q9Y487 856 aa21.82■■□□□ 1.08
AP004609.1-201ENST00000498872 GJA3Q9Y6H8 435 aa21.82■■□□□ 1.08
AP004609.1-201ENST00000498872 ISCA1Q9BUE6 129 aa21.81■■□□□ 1.08
AP004609.1-201ENST00000498872 TMX4Q9H1E5 349 aaPredicted RBP21.81■■□□□ 1.08
AP004609.1-201ENST00000498872 AOC3Q16853 763 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms