RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 MAP3K19Q56UN5 1328 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 GOLGA6L22H0YM25 854 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 PTGS1P23219 599 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 IL13P35225 146 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 SEMA3FQ13275 785 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 BORCS6Q96GS4 357 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 NCAPGQ9BPX3 1015 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 EFCC1Q9HA90 598 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 PLEKHG1Q9ULL1 1385 aa6.89□□□□□ -1.31
SOX2-OT-218ENST00000498731 SETQ01105 290 aaPredicted RBP6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 SKIV2LQ15477 1246 aaKnown RBP6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 NGLY1Q96IV0 654 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 RASSF4Q9H2L5 321 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 TSPY26PQ9H489 355 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 U3KPZ7 1027 aaPredicted RBP6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 KIF16BQ96L93 1317 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 IFT172Q9UG01 1749 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 PDE3AQ14432 1141 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 TWISTNBQ3B726 338 aaPredicted RBP6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 PRPF38AQ8NAV1 312 aaKnown RBP6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 MYOM1P52179 1685 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 INSRP06213 1382 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 CCDC189A1A4V9 331 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 IPO8O15397 1037 aaKnown RBP6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 EIF2S2P20042 333 aaKnown RBP6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 PLA2G4AP47712 749 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 GNAI1P63096 354 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 ARID5BQ14865 1188 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 CABLES1Q8TDN4 633 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 PLEKHF1Q96S99 279 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 MYCBPQ99417 103 aaPredicted RBP6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 TSPYL4Q9UJ04 414 aa6.88□□□□□ -1.31
SOX2-OT-218ENST00000498731 ARHGEF28Q8N1W1 1705 aaKnown RBP6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 SPATA31D1Q6ZQQ2 1576 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 ADAMTS13Q76LX8 1427 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 PTMSP20962 102 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 GUCY2CP25092 1073 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 TBC1D9Q6ZT07 1266 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 NOL10Q9BSC4 688 aaKnown RBP6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 CEP83Q9Y592 693 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 EDC4Q6P2E9 1401 aaKnown RBP6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 PTPRUQ92729 1446 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 TMEM57Q8N5G2 664 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 LRRC59Q96AG4 307 aaKnown RBP6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 KIF1BPQ96EK5 621 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 EPC1Q9H2F5 836 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 MBIPQ9NS73 344 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 FHOD1Q9Y613 1164 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 EP400Q96L91 3159 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 PPFIA4O75335 1185 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 NOM1Q5C9Z4 860 aaKnown RBP6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 C8orf58Q8NAV2 365 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 ZNF622Q969S3 477 aaKnown RBP eCLIP6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 USP26Q9BXU7 913 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 SH3BP1Q9Y3L3 701 aa6.87□□□□□ -1.31
SOX2-OT-218ENST00000498731 CCDC172P0C7W6 258 aa6.86□□□□□ -1.31
SOX2-OT-218ENST00000498731 TRIM27P14373 513 aa6.86□□□□□ -1.31
SOX2-OT-218ENST00000498731 EYA1Q99502 592 aa6.86□□□□□ -1.31
SOX2-OT-218ENST00000498731 GOLGB1Q14789 3259 aaKnown RBP6.86□□□□□ -1.31
SOX2-OT-218ENST00000498731 CASQ1P31415 396 aa6.86□□□□□ -1.31
SOX2-OT-218ENST00000498731 ATF7IPQ6VMQ6 1270 aa6.86□□□□□ -1.31
SOX2-OT-218ENST00000498731 ANKRD13AQ8IZ07 590 aa6.86□□□□□ -1.31
SOX2-OT-218ENST00000498731 CDCA7Q9BWT1 371 aaPredicted RBP6.86□□□□□ -1.31
SOX2-OT-218ENST00000498731 NLRP2Q9NX02 1062 aa6.86□□□□□ -1.31
SOX2-OT-218ENST00000498731 INHBEP58166 350 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 CHRNA2Q15822 529 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 KRT28Q7Z3Y7 464 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 CCDC191Q8NCU4 936 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 MRRFQ96E11 262 aaKnown RBP6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 RWDD1Q9H446 243 aaPredicted RBP6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 PLEKHA4Q9H4M7 779 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 SUFUQ9UMX1 484 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 NEURL4Q96JN8 1562 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 SEC31AO94979 1220 aaKnown RBP6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 MCCP23508 829 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 PDE6BP35913 854 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 MTHFSDQ2M296 383 aaKnown RBP6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 BRINP3Q76B58 766 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 JRKLQ9Y4A0 524 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 A6NJR5 290 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 CWC27Q6UX04 472 aaKnown RBP6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 CD163L1Q9NR16 1453 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 UTRNP46939 3433 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 CPS1P31327 1500 aa6.85□□□□□ -1.31
SOX2-OT-218ENST00000498731 LRRC7Q96NW7 1537 aa6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 PTPRCP08575 1304 aa6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 PAX3P23760 479 aa6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 MVPQ14764 893 aaKnown RBP6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 PLEKHO1Q53GL0 409 aaPredicted RBP6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 CXorf56Q9H5V9 222 aa6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 DIAPH3Q9NSV4 1193 aa6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 MCM6Q14566 821 aa6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 ERCC6LQ2NKX8 1250 aa6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 ANKRD45Q5TZF3 282 aa6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 REXO1L1PQ8IX06 675 aa6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 LRRFIP2Q9Y608 721 aaKnown RBP6.84□□□□□ -1.31
SOX2-OT-218ENST00000498731 FAM135BQ49AJ0 1406 aa6.84□□□□□ -1.32
SOX2-OT-218ENST00000498731 F6X3S4 739 aa6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 PARNO95453 639 aaKnown RBP6.83□□□□□ -1.32
SOX2-OT-218ENST00000498731 TEFQ10587 303 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms