RNA–Protein interactions for RNA: ENST00000498353.5

NECAB3-216, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-216ENST00000498353 TNRC6CQ9HCJ0 1690 aaKnown RBP22.82■■□□□ 1.24
NECAB3-216ENST00000498353 SENP3-EIF4A1A0A087X0R7 540 aa22.82■■□□□ 1.24
NECAB3-216ENST00000498353 HOXA10P31260 410 aaPredicted RBP22.82■■□□□ 1.24
NECAB3-216ENST00000498353 SLC10A5Q5PT55 438 aa22.82■■□□□ 1.24
NECAB3-216ENST00000498353 ANKRD13DQ6ZTN6 518 aa22.82■■□□□ 1.24
NECAB3-216ENST00000498353 NLRP10Q86W26 655 aa22.82■■□□□ 1.24
NECAB3-216ENST00000498353 PLBD2Q8NHP8 589 aa22.82■■□□□ 1.24
NECAB3-216ENST00000498353 RNF123Q5XPI4 1314 aa22.82■■□□□ 1.24
NECAB3-216ENST00000498353 ELL2O00472 640 aaPredicted RBP22.81■■□□□ 1.24
NECAB3-216ENST00000498353 CCDC93Q567U6 631 aa22.81■■□□□ 1.24
NECAB3-216ENST00000498353 C8orf58Q8NAV2 365 aa22.81■■□□□ 1.24
NECAB3-216ENST00000498353 GLTPD2A6NH11 291 aa22.8■■□□□ 1.24
NECAB3-216ENST00000498353 TOMM70O94826 608 aa22.8■■□□□ 1.24
NECAB3-216ENST00000498353 RPGRQ92834 1020 aaKnown RBP22.79■■□□□ 1.24
NECAB3-216ENST00000498353 NLRP3Q96P20 1036 aa22.79■■□□□ 1.24
NECAB3-216ENST00000498353 CHMP4AQ9BY43 222 aa22.79■■□□□ 1.24
NECAB3-216ENST00000498353 RTKN2Q8IZC4 609 aa22.78■■□□□ 1.24
NECAB3-216ENST00000498353 CRAMP1Q96RY5 1269 aa22.78■■□□□ 1.24
NECAB3-216ENST00000498353 IL16Q14005 1332 aa22.78■■□□□ 1.24
NECAB3-216ENST00000498353 CACNA1SQ13698 1873 aa22.77■■□□□ 1.24
NECAB3-216ENST00000498353 FKBP4Q02790 459 aaKnown RBP eCLIP22.77■■□□□ 1.24
NECAB3-216ENST00000498353 OLFM4Q6UX06 510 aa22.77■■□□□ 1.24
NECAB3-216ENST00000498353 C3orf67Q6ZVT6 689 aa22.77■■□□□ 1.24
NECAB3-216ENST00000498353 RBM17Q96I25 401 aaKnown RBP22.77■■□□□ 1.24
NECAB3-216ENST00000498353 RRAGCQ9HB90 399 aa22.77■■□□□ 1.24
NECAB3-216ENST00000498353 TRMT112Q9UI30 125 aaKnown RBP22.77■■□□□ 1.24
NECAB3-216ENST00000498353 ANKRD36CQ5JPF3 1778 aa22.76■■□□□ 1.23
NECAB3-216ENST00000498353 CC2D2BQ6DHV5 1058 aa22.76■■□□□ 1.23
NECAB3-216ENST00000498353 ISCA1Q9BUE6 129 aa22.76■■□□□ 1.23
NECAB3-216ENST00000498353 CCDC30Q5VVM6 783 aa22.75■■□□□ 1.23
NECAB3-216ENST00000498353 DPY19L2Q6NUT2 758 aa22.75■■□□□ 1.23
NECAB3-216ENST00000498353 TSR2Q969E8 191 aaKnown RBP22.75■■□□□ 1.23
NECAB3-216ENST00000498353 PHAXQ9H814 394 aaKnown RBP22.75■■□□□ 1.23
NECAB3-216ENST00000498353 CCDC88AQ3V6T2 1871 aa22.75■■□□□ 1.23
NECAB3-216ENST00000498353 TSPYL6Q8N831 410 aa22.74■■□□□ 1.23
NECAB3-216ENST00000498353 SH3TC1Q8TE82 1336 aa22.74■■□□□ 1.23
NECAB3-216ENST00000498353 TIAM2Q8IVF5 1701 aa22.74■■□□□ 1.23
NECAB3-216ENST00000498353 SNED1Q8TER0 1413 aa22.74■■□□□ 1.23
NECAB3-216ENST00000498353 HSPA6P17066 643 aa22.73■■□□□ 1.23
NECAB3-216ENST00000498353 TRIM28Q13263 835 aaKnown RBP22.73■■□□□ 1.23
NECAB3-216ENST00000498353 C16orf71Q8IYS4 520 aaPredicted RBP22.73■■□□□ 1.23
NECAB3-216ENST00000498353 SYNE4Q8N205 404 aa22.73■■□□□ 1.23
NECAB3-216ENST00000498353 RBM46Q8TBY0 533 aaKnown RBP22.73■■□□□ 1.23
NECAB3-216ENST00000498353 ATP5J2-PTCD1G3V325 749 aa22.72■■□□□ 1.23
NECAB3-216ENST00000498353 HCLS1P14317 486 aaPredicted RBP22.72■■□□□ 1.23
NECAB3-216ENST00000498353 GOLGA2Q08379 1002 aa22.72■■□□□ 1.23
NECAB3-216ENST00000498353 GRIPAP1Q4V328 841 aa22.72■■□□□ 1.23
NECAB3-216ENST00000498353 RIC3Q7Z5B4 369 aa22.72■■□□□ 1.23
NECAB3-216ENST00000498353 WDR63Q8IWG1 891 aa22.72■■□□□ 1.23
NECAB3-216ENST00000498353 PSMD1Q99460 953 aa22.72■■□□□ 1.23
NECAB3-216ENST00000498353 DICER1Q9UPY3 1922 aaKnown RBP22.72■■□□□ 1.23
NECAB3-216ENST00000498353 VEGFAP15692 232 aaPredicted RBP22.71■■□□□ 1.23
NECAB3-216ENST00000498353 FAM9BQ8IZU0 186 aa22.71■■□□□ 1.23
NECAB3-216ENST00000498353 ZNF277Q9NRM2 450 aaPredicted RBP22.71■■□□□ 1.23
NECAB3-216ENST00000498353 PPEF1O14829 653 aaPredicted RBP22.7■■□□□ 1.22
NECAB3-216ENST00000498353 SALL2Q9Y467 1007 aaPredicted RBP22.7■■□□□ 1.22
NECAB3-216ENST00000498353 ABCC4O15439 1325 aa22.69■■□□□ 1.22
NECAB3-216ENST00000498353 TWISTNBQ3B726 338 aaPredicted RBP22.69■■□□□ 1.22
NECAB3-216ENST00000498353 POTECB2RU33 542 aa22.68■■□□□ 1.22
NECAB3-216ENST00000498353 DDX58O95786 925 aaKnown RBP22.68■■□□□ 1.22
NECAB3-216ENST00000498353 IARSP41252 1262 aaKnown RBP22.68■■□□□ 1.22
NECAB3-216ENST00000498353 FAM89AQ96GI7 184 aa22.68■■□□□ 1.22
NECAB3-216ENST00000498353 BBOX1O75936 387 aa22.67■■□□□ 1.22
NECAB3-216ENST00000498353 FSTL1Q12841 308 aa22.67■■□□□ 1.22
NECAB3-216ENST00000498353 ZNF428Q96B54 188 aa22.67■■□□□ 1.22
NECAB3-216ENST00000498353 ATP6V0A2Q9Y487 856 aa22.67■■□□□ 1.22
NECAB3-216ENST00000498353 WDR90Q96KV7 1748 aa22.66■■□□□ 1.22
NECAB3-216ENST00000498353 FANCIQ9NVI1 1328 aa22.66■■□□□ 1.22
NECAB3-216ENST00000498353 TCERG1O14776 1098 aaKnown RBP22.66■■□□□ 1.22
NECAB3-216ENST00000498353 DDNO94850 711 aaPredicted RBP22.66■■□□□ 1.22
NECAB3-216ENST00000498353 DDX46Q7L014 1031 aaKnown RBP22.66■■□□□ 1.22
NECAB3-216ENST00000498353 STK31Q9BXU1 1019 aa22.66■■□□□ 1.22
NECAB3-216ENST00000498353 SF3B3Q15393 1217 aaKnown RBP22.65■■□□□ 1.22
NECAB3-216ENST00000498353 CCDC191Q8NCU4 936 aa22.65■■□□□ 1.22
NECAB3-216ENST00000498353 MYD88Q99836 296 aa22.65■■□□□ 1.22
NECAB3-216ENST00000498353 METTL22Q9BUU2 404 aaPredicted RBP22.65■■□□□ 1.22
NECAB3-216ENST00000498353 TMX4Q9H1E5 349 aaPredicted RBP22.65■■□□□ 1.22
NECAB3-216ENST00000498353 FZD9O00144 591 aa22.64■■□□□ 1.21
NECAB3-216ENST00000498353 GRAPQ13588 217 aa22.64■■□□□ 1.21
NECAB3-216ENST00000498353 SLC51AQ86UW1 340 aa22.64■■□□□ 1.21
NECAB3-216ENST00000498353 SP8Q8IXZ3 490 aa22.64■■□□□ 1.21
NECAB3-216ENST00000498353 ZBTB38Q8NAP3 1195 aaPredicted RBP22.64■■□□□ 1.21
NECAB3-216ENST00000498353 GRAPLQ8TC17 118 aaPredicted RBP22.64■■□□□ 1.21
NECAB3-216ENST00000498353 CEP350Q5VT06 3117 aa22.64■■□□□ 1.21
NECAB3-216ENST00000498353 IRS4O14654 1257 aaPredicted RBP22.63■■□□□ 1.21
NECAB3-216ENST00000498353 KSR2Q6VAB6 950 aa22.63■■□□□ 1.21
NECAB3-216ENST00000498353 SMC1BQ8NDV3 1235 aa22.63■■□□□ 1.21
NECAB3-216ENST00000498353 SLC4A2P04920 1241 aa22.62■■□□□ 1.21
NECAB3-216ENST00000498353 RTL5Q5HYW3 569 aaPredicted RBP22.62■■□□□ 1.21
NECAB3-216ENST00000498353 JDP2Q8WYK2 163 aa22.62■■□□□ 1.21
NECAB3-216ENST00000498353 L3MBTL3Q96JM7 780 aaPredicted RBP22.62■■□□□ 1.21
NECAB3-216ENST00000498353 MAP3K2Q9Y2U5 619 aa22.62■■□□□ 1.21
NECAB3-216ENST00000498353 LAMB2P55268 1798 aa22.62■■□□□ 1.21
NECAB3-216ENST00000498353 PI4KAP2A4QPH2 592 aa22.61■■□□□ 1.21
NECAB3-216ENST00000498353 VAMP4O75379 141 aa22.61■■□□□ 1.21
NECAB3-216ENST00000498353 APLP1P51693 650 aa22.61■■□□□ 1.21
NECAB3-216ENST00000498353 TMC4Q7Z404 712 aa22.61■■□□□ 1.21
NECAB3-216ENST00000498353 PI4KAP1Q8N8J0 262 aa22.61■■□□□ 1.21
NECAB3-216ENST00000498353 VPS33BQ9H267 617 aa22.61■■□□□ 1.21
NECAB3-216ENST00000498353 SPINK5Q9NQ38 1064 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms