RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 DKK1O94907 266 aa5.71□□□□□ -1.5
RBM39-242ENST00000498280 LCE1DQ5T752 114 aa5.71□□□□□ -1.5
RBM39-242ENST00000498280 CCDC102BQ68D86 513 aa5.71□□□□□ -1.5
RBM39-242ENST00000498280 C20orf204Q6ZNR8 217 aa5.71□□□□□ -1.5
RBM39-242ENST00000498280 TSEN2Q8NCE0 465 aaKnown RBP5.71□□□□□ -1.5
RBM39-242ENST00000498280 CEP63Q96MT8 703 aa5.71□□□□□ -1.5
RBM39-242ENST00000498280 UBE2OQ9C0C9 1292 aaKnown RBP5.71□□□□□ -1.5
RBM39-242ENST00000498280 JPH1Q9HDC5 661 aaPredicted RBP5.71□□□□□ -1.5
RBM39-242ENST00000498280 ANKIB1Q9P2G1 1089 aa5.71□□□□□ -1.5
RBM39-242ENST00000498280 CHMP3Q9Y3E7 222 aa5.71□□□□□ -1.5
RBM39-242ENST00000498280 USP17L3A6NCW0 530 aa5.7□□□□□ -1.5
RBM39-242ENST00000498280 USP17L4A6NCW7 530 aa5.7□□□□□ -1.5
RBM39-242ENST00000498280 C21orf2O43822 256 aa5.7□□□□□ -1.5
RBM39-242ENST00000498280 TBC1D8BQ0IIM8 1120 aa5.7□□□□□ -1.5
RBM39-242ENST00000498280 USP17L2Q6R6M4 530 aa5.7□□□□□ -1.5
RBM39-242ENST00000498280 USP17L1Q7RTZ2 530 aa5.7□□□□□ -1.5
RBM39-242ENST00000498280 KCNH4Q9UQ05 1017 aa5.7□□□□□ -1.5
RBM39-242ENST00000498280 LZTS3O60299 673 aaPredicted RBP5.69□□□□□ -1.5
RBM39-242ENST00000498280 KCNQ4P56696 695 aa5.69□□□□□ -1.5
RBM39-242ENST00000498280 FMR1NBQ8N0W7 255 aaPredicted RBP5.69□□□□□ -1.5
RBM39-242ENST00000498280 OGFOD1Q8N543 542 aa5.69□□□□□ -1.5
RBM39-242ENST00000498280 BHMTQ93088 406 aa5.69□□□□□ -1.5
RBM39-242ENST00000498280 ZNF594Q96JF6 807 aaPredicted RBP5.69□□□□□ -1.5
RBM39-242ENST00000498280 PHACTR1Q9C0D0 580 aa5.69□□□□□ -1.5
RBM39-242ENST00000498280 RNF112Q9ULX5 631 aa5.69□□□□□ -1.5
RBM39-242ENST00000498280 SLC6A14Q9UN76 642 aa5.69□□□□□ -1.5
RBM39-242ENST00000498280 PAX4O43316 350 aa5.68□□□□□ -1.5
RBM39-242ENST00000498280 PSMA6P60900 246 aaKnown RBP5.68□□□□□ -1.5
RBM39-242ENST00000498280 TYRO3Q06418 890 aa5.68□□□□□ -1.5
RBM39-242ENST00000498280 POTEAQ6S8J7 498 aa5.68□□□□□ -1.5
RBM39-242ENST00000498280 SHISA2Q6UWI4 295 aa5.68□□□□□ -1.5
RBM39-242ENST00000498280 SUSD3Q96L08 255 aa5.68□□□□□ -1.5
RBM39-242ENST00000498280 SSBP4Q9BWG4 385 aaPredicted RBP5.68□□□□□ -1.5
RBM39-242ENST00000498280 EFCC1Q9HA90 598 aa5.68□□□□□ -1.5
RBM39-242ENST00000498280 MKRN1Q9UHC7 482 aaKnown RBP5.68□□□□□ -1.5
RBM39-242ENST00000498280 ATP9BO43861 1147 aa5.67□□□□□ -1.5
RBM39-242ENST00000498280 HIF1AQ16665 826 aa5.67□□□□□ -1.5
RBM39-242ENST00000498280 C1orf53Q5VUE5 145 aa5.67□□□□□ -1.5
RBM39-242ENST00000498280 PLEKHM2Q8IWE5 1019 aa5.67□□□□□ -1.5
RBM39-242ENST00000498280 HIRAP54198 1017 aaPredicted RBP5.66□□□□□ -1.5
RBM39-242ENST00000498280 PSAPL1Q6NUJ1 521 aa5.66□□□□□ -1.5
RBM39-242ENST00000498280 TRIM50Q86XT4 487 aa5.66□□□□□ -1.5
RBM39-242ENST00000498280 DTWD1Q8N5C7 304 aa5.66□□□□□ -1.5
RBM39-242ENST00000498280 NUDT8Q8WV74 236 aa5.66□□□□□ -1.5
RBM39-242ENST00000498280 CLUAP1Q96AJ1 413 aa5.66□□□□□ -1.5
RBM39-242ENST00000498280 PCMTD2Q9NV79 361 aa5.66□□□□□ -1.5
RBM39-242ENST00000498280 PPP1R12BO60237 982 aaPredicted RBP5.65□□□□□ -1.5
RBM39-242ENST00000498280 UBTFP17480 764 aaKnown RBP5.65□□□□□ -1.5
RBM39-242ENST00000498280 GRNP28799 593 aaKnown RBP5.65□□□□□ -1.5
RBM39-242ENST00000498280 TXKP42681 527 aa5.65□□□□□ -1.5
RBM39-242ENST00000498280 AFF1P51825 1210 aaKnown RBP5.65□□□□□ -1.5
RBM39-242ENST00000498280 ALDH16A1Q8IZ83 802 aa5.65□□□□□ -1.5
RBM39-242ENST00000498280 NGLY1Q96IV0 654 aa5.65□□□□□ -1.5
RBM39-242ENST00000498280 PNMA5Q96PV4 448 aa5.65□□□□□ -1.5
RBM39-242ENST00000498280 RAD21O60216 631 aa5.64□□□□□ -1.51
RBM39-242ENST00000498280 RGS9O75916 674 aaPredicted RBP5.64□□□□□ -1.51
RBM39-242ENST00000498280 YBX3P16989 372 aaKnown RBP eCLIP5.64□□□□□ -1.51
RBM39-242ENST00000498280 DMRTC2Q8IXT2 367 aaPredicted RBP5.64□□□□□ -1.51
RBM39-242ENST00000498280 SIX5Q8N196 739 aa5.64□□□□□ -1.51
RBM39-242ENST00000498280 LARGE2Q8N3Y3 721 aa5.64□□□□□ -1.51
RBM39-242ENST00000498280 CHMP7Q8WUX9 453 aaPredicted RBP5.64□□□□□ -1.51
RBM39-242ENST00000498280 SCG3Q8WXD2 468 aaKnown RBP5.64□□□□□ -1.51
RBM39-242ENST00000498280 C2orf49Q9BVC5 232 aaPredicted RBP5.64□□□□□ -1.51
RBM39-242ENST00000498280 IGFLR1Q9H665 355 aa5.64□□□□□ -1.51
RBM39-242ENST00000498280 TFIP11Q9UBB9 837 aaKnown RBP5.64□□□□□ -1.51
RBM39-242ENST00000498280 BCS1LQ9Y276 419 aa5.64□□□□□ -1.51
RBM39-242ENST00000498280 ATAD2Q6PL18 1390 aa5.64□□□□□ -1.51
RBM39-242ENST00000498280 COL17A1Q9UMD9 1497 aaPredicted RBP5.64□□□□□ -1.51
RBM39-242ENST00000498280 PALM3A6NDB9 673 aaPredicted RBP5.63□□□□□ -1.51
RBM39-242ENST00000498280 ATP1A2P50993 1020 aa5.63□□□□□ -1.51
RBM39-242ENST00000498280 PCSK7Q16549 785 aa5.63□□□□□ -1.51
RBM39-242ENST00000498280 BTLAQ7Z6A9 289 aa5.63□□□□□ -1.51
RBM39-242ENST00000498280 WFDC12Q8WWY7 111 aa5.63□□□□□ -1.51
RBM39-242ENST00000498280 DNAJB12Q9NXW2 375 aaKnown RBP5.63□□□□□ -1.51
RBM39-242ENST00000498280 NAGPAQ9UK23 515 aa5.63□□□□□ -1.51
RBM39-242ENST00000498280 M0R2N6 131 aa5.62□□□□□ -1.51
RBM39-242ENST00000498280 IREB2P48200 963 aaKnown RBP5.62□□□□□ -1.51
RBM39-242ENST00000498280 CRTC2Q53ET0 693 aaPredicted RBP5.62□□□□□ -1.51
RBM39-242ENST00000498280 MSL1Q68DK7 614 aa5.62□□□□□ -1.51
RBM39-242ENST00000498280 PRR23CQ6ZRP0 262 aa5.62□□□□□ -1.51
RBM39-242ENST00000498280 SLC51AQ86UW1 340 aa5.62□□□□□ -1.51
RBM39-242ENST00000498280 FNBP4Q8N3X1 1017 aaPredicted RBP5.62□□□□□ -1.51
RBM39-242ENST00000498280 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.62□□□□□ -1.51
RBM39-242ENST00000498280 RASA1P20936 1047 aa5.61□□□□□ -1.51
RBM39-242ENST00000498280 NOS3P29474 1203 aa5.61□□□□□ -1.51
RBM39-242ENST00000498280 PLAURQ03405 335 aa5.61□□□□□ -1.51
RBM39-242ENST00000498280 FBXO11Q86XK2 927 aa5.61□□□□□ -1.51
RBM39-242ENST00000498280 WWC1Q8IX03 1113 aa5.61□□□□□ -1.51
RBM39-242ENST00000498280 GLMNQ92990 594 aa5.61□□□□□ -1.51
RBM39-242ENST00000498280 FMNL2Q96PY5 1086 aa5.61□□□□□ -1.51
RBM39-242ENST00000498280 GSX2Q9BZM3 304 aa5.61□□□□□ -1.51
RBM39-242ENST00000498280 DMGDHQ9UI17 866 aaKnown RBP5.61□□□□□ -1.51
RBM39-242ENST00000498280 MAFBQ9Y5Q3 323 aaPredicted RBP5.61□□□□□ -1.51
RBM39-242ENST00000498280 EPB42P16452 691 aa5.6□□□□□ -1.51
RBM39-242ENST00000498280 NFKB1P19838 968 aa5.6□□□□□ -1.51
RBM39-242ENST00000498280 IRAK1P51617 712 aa5.6□□□□□ -1.51
RBM39-242ENST00000498280 KANK4Q5T7N3 995 aaPredicted RBP5.6□□□□□ -1.51
RBM39-242ENST00000498280 IGF2-ASQ6U949 168 aa5.6□□□□□ -1.51
RBM39-242ENST00000498280 FAM35AQ86V20 835 aa5.6□□□□□ -1.51
RBM39-242ENST00000498280 WFDC8Q8IUA0 241 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms