RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 USP42Q9H9J4 1324 aaKnown RBP20.04■□□□□ 0.8
PTK7-220ENST00000497957 PNMA6EA0A0J9YXQ4 647 aa20.04■□□□□ 0.8
PTK7-220ENST00000497957 BAG6P46379 1132 aa20.04■□□□□ 0.8
PTK7-220ENST00000497957 SF3B2Q13435 895 aaKnown RBP20.04■□□□□ 0.8
PTK7-220ENST00000497957 AAMPQ13685 434 aa20.04■□□□□ 0.8
PTK7-220ENST00000497957 SUSD4Q5VX71 490 aa20.04■□□□□ 0.8
PTK7-220ENST00000497957 BICDL1Q6ZP65 573 aa20.04■□□□□ 0.8
PTK7-220ENST00000497957 ANKRD44Q8N8A2 993 aa20.04■□□□□ 0.8
PTK7-220ENST00000497957 CCDC191Q8NCU4 936 aa20.04■□□□□ 0.8
PTK7-220ENST00000497957 TRIM28Q13263 835 aaKnown RBP20.03■□□□□ 0.8
PTK7-220ENST00000497957 RFC4P35249 363 aa20.02■□□□□ 0.8
PTK7-220ENST00000497957 COL23A1Q86Y22 540 aaPredicted RBP20.02■□□□□ 0.8
PTK7-220ENST00000497957 FAM89AQ96GI7 184 aa20.02■□□□□ 0.8
PTK7-220ENST00000497957 CHMP4BQ9H444 224 aaKnown RBP20.02■□□□□ 0.8
PTK7-220ENST00000497957 BICC1Q9H694 974 aaKnown RBP20.02■□□□□ 0.8
PTK7-220ENST00000497957 TFCP2L1Q9NZI6 479 aa20.02■□□□□ 0.8
PTK7-220ENST00000497957 NIP7Q9Y221 180 aaKnown RBP eCLIP20.02■□□□□ 0.8
PTK7-220ENST00000497957 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.79
PTK7-220ENST00000497957 IBTKQ9P2D0 1353 aaPredicted RBP20.01■□□□□ 0.79
PTK7-220ENST00000497957 SSFA2P28290 1259 aa20.01■□□□□ 0.79
PTK7-220ENST00000497957 HSP90AB3PQ58FF7 597 aa20.01■□□□□ 0.79
PTK7-220ENST00000497957 ZPR1O75312 459 aa20■□□□□ 0.79
PTK7-220ENST00000497957 ATP8B2P98198 1209 aa20■□□□□ 0.79
PTK7-220ENST00000497957 HDAC1Q13547 482 aaPredicted RBP20■□□□□ 0.79
PTK7-220ENST00000497957 ILDR2Q71H61 639 aa20■□□□□ 0.79
PTK7-220ENST00000497957 UPF1Q92900 1129 aaKnown RBP eCLIP20■□□□□ 0.79
PTK7-220ENST00000497957 PCCAP05165 728 aaPredicted RBP19.99■□□□□ 0.79
PTK7-220ENST00000497957 GYS1P13807 737 aa19.99■□□□□ 0.79
PTK7-220ENST00000497957 FOXO4P98177 505 aa19.99■□□□□ 0.79
PTK7-220ENST00000497957 PPP1R42Q7Z4L9 355 aa19.99■□□□□ 0.79
PTK7-220ENST00000497957 NTSR2O95665 410 aa19.98■□□□□ 0.79
PTK7-220ENST00000497957 ADRA2BP18089 450 aa19.98■□□□□ 0.79
PTK7-220ENST00000497957 NUTM1Q86Y26 1132 aa19.98■□□□□ 0.79
PTK7-220ENST00000497957 CCDC24Q8N4L8 307 aa19.98■□□□□ 0.79
PTK7-220ENST00000497957 RWDD1Q9H446 243 aaPredicted RBP19.98■□□□□ 0.79
PTK7-220ENST00000497957 TRMT112Q9UI30 125 aaKnown RBP19.98■□□□□ 0.79
PTK7-220ENST00000497957 COL24A1Q17RW2 1714 aa19.97■□□□□ 0.79
PTK7-220ENST00000497957 MSH5O43196 834 aa19.97■□□□□ 0.79
PTK7-220ENST00000497957 NFIXQ14938 502 aa19.97■□□□□ 0.79
PTK7-220ENST00000497957 SLC15A2Q16348 729 aa19.97■□□□□ 0.79
PTK7-220ENST00000497957 CLEC4GQ6UXB4 293 aa19.97■□□□□ 0.79
PTK7-220ENST00000497957 CENPQQ7L2Z9 268 aaPredicted RBP19.97■□□□□ 0.79
PTK7-220ENST00000497957 RPAP2Q8IXW5 612 aaPredicted RBP19.97■□□□□ 0.79
PTK7-220ENST00000497957 ZBTB38Q8NAP3 1195 aaPredicted RBP19.97■□□□□ 0.79
PTK7-220ENST00000497957 PDGFDQ9GZP0 370 aaPredicted RBP19.97■□□□□ 0.79
PTK7-220ENST00000497957 ZNF652Q9Y2D9 606 aa19.97■□□□□ 0.79
PTK7-220ENST00000497957 POLA2Q14181 598 aa19.96■□□□□ 0.79
PTK7-220ENST00000497957 STK32BQ9NY57 414 aa19.96■□□□□ 0.79
PTK7-220ENST00000497957 HCLS1P14317 486 aaPredicted RBP19.95■□□□□ 0.78
PTK7-220ENST00000497957 CCDC85AQ96PX6 553 aaPredicted RBP19.95■□□□□ 0.78
PTK7-220ENST00000497957 UTP14AQ9BVJ6 771 aaKnown RBP19.95■□□□□ 0.78
PTK7-220ENST00000497957 PA2G4Q9UQ80 394 aaKnown RBP19.95■□□□□ 0.78
PTK7-220ENST00000497957 DDX60Q8IY21 1712 aaKnown RBP19.95■□□□□ 0.78
PTK7-220ENST00000497957 ABCC12Q96J65 1359 aa19.95■□□□□ 0.78
PTK7-220ENST00000497957 SRGAP3O43295 1099 aa19.94■□□□□ 0.78
PTK7-220ENST00000497957 ERFEQ4G0M1 354 aa19.94■□□□□ 0.78
PTK7-220ENST00000497957 PARP10Q53GL7 1025 aa19.94■□□□□ 0.78
PTK7-220ENST00000497957 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
PTK7-220ENST00000497957 LMBR1LQ6UX01 489 aa19.94■□□□□ 0.78
PTK7-220ENST00000497957 C3orf67Q6ZVT6 689 aa19.94■□□□□ 0.78
PTK7-220ENST00000497957 KLHDC4Q8TBB5 520 aa19.94■□□□□ 0.78
PTK7-220ENST00000497957 SSH3Q8TE77 659 aa19.94■□□□□ 0.78
PTK7-220ENST00000497957 PDZRN3Q9UPQ7 1066 aa19.94■□□□□ 0.78
PTK7-220ENST00000497957 IRS4O14654 1257 aaPredicted RBP19.93■□□□□ 0.78
PTK7-220ENST00000497957 DDR1Q08345 913 aa19.93■□□□□ 0.78
PTK7-220ENST00000497957 MTX1Q13505 466 aa19.93■□□□□ 0.78
PTK7-220ENST00000497957 RABL6Q3YEC7 729 aaPredicted RBP19.93■□□□□ 0.78
PTK7-220ENST00000497957 CCDC125Q86Z20 511 aa19.93■□□□□ 0.78
PTK7-220ENST00000497957 SMC5Q8IY18 1101 aa19.93■□□□□ 0.78
PTK7-220ENST00000497957 EXOC6BQ9Y2D4 811 aa19.93■□□□□ 0.78
PTK7-220ENST00000497957 CDHR2Q9BYE9 1310 aa19.93■□□□□ 0.78
PTK7-220ENST00000497957 APBB1O00213 710 aa19.92■□□□□ 0.78
PTK7-220ENST00000497957 RGL2O15211 777 aa19.92■□□□□ 0.78
PTK7-220ENST00000497957 RFX5P48382 616 aaPredicted RBP19.92■□□□□ 0.78
PTK7-220ENST00000497957 SETDB2Q96T68 719 aa19.92■□□□□ 0.78
PTK7-220ENST00000497957 DCTPP1Q9H773 170 aa19.92■□□□□ 0.78
PTK7-220ENST00000497957 COL4A1P02462 1669 aa19.91■□□□□ 0.78
PTK7-220ENST00000497957 SMARCA5O60264 1052 aaPredicted RBP19.91■□□□□ 0.78
PTK7-220ENST00000497957 TM4SF1P30408 202 aa19.91■□□□□ 0.78
PTK7-220ENST00000497957 SH3TC1Q8TE82 1336 aa19.91■□□□□ 0.78
PTK7-220ENST00000497957 QSER1Q2KHR3 1735 aa19.9■□□□□ 0.78
PTK7-220ENST00000497957 PLA2G12BQ9BX93 195 aa19.9■□□□□ 0.78
PTK7-220ENST00000497957 CHMP3Q9Y3E7 222 aa19.9■□□□□ 0.78
PTK7-220ENST00000497957 TNRC6CQ9HCJ0 1690 aaKnown RBP19.9■□□□□ 0.78
PTK7-220ENST00000497957 LAMB2P55268 1798 aa19.9■□□□□ 0.78
PTK7-220ENST00000497957 PDE4AP27815 886 aa19.89■□□□□ 0.77
PTK7-220ENST00000497957 FAM161AQ3B820 660 aa19.89■□□□□ 0.77
PTK7-220ENST00000497957 CASZ1Q86V15 1759 aa19.89■□□□□ 0.77
PTK7-220ENST00000497957 NBPF5PQ86XG9 351 aaPredicted RBP19.89■□□□□ 0.77
PTK7-220ENST00000497957 ZNF594Q96JF6 807 aaPredicted RBP19.89■□□□□ 0.77
PTK7-220ENST00000497957 BCL11AQ9H165 835 aa19.89■□□□□ 0.77
PTK7-220ENST00000497957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.89■□□□□ 0.77
PTK7-220ENST00000497957 HMMRO75330 724 aa19.88■□□□□ 0.77
PTK7-220ENST00000497957 CTSWP56202 376 aa19.88■□□□□ 0.77
PTK7-220ENST00000497957 TTLL11Q8NHH1 800 aa19.88■□□□□ 0.77
PTK7-220ENST00000497957 CARMIL3Q8ND23 1372 aa19.87■□□□□ 0.77
PTK7-220ENST00000497957 POLRMTO00411 1230 aaKnown RBP19.87■□□□□ 0.77
PTK7-220ENST00000497957 PDE8AO60658 829 aa19.87■□□□□ 0.77
PTK7-220ENST00000497957 CSF1RP07333 972 aa19.87■□□□□ 0.77
PTK7-220ENST00000497957 FLAD1Q8NFF5 587 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms