RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 APBB1O00213 710 aa14.05□□□□□ -0.16
SNRNP200-208ENST00000497539 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
SNRNP200-208ENST00000497539 PI4K2BQ8TCG2 481 aa14.05□□□□□ -0.16
SNRNP200-208ENST00000497539 DOT1LQ8TEK3 1739 aa14.05□□□□□ -0.16
SNRNP200-208ENST00000497539 NBPF26B4DH59 902 aa14.05□□□□□ -0.16
SNRNP200-208ENST00000497539 ERC2O15083 957 aa14.05□□□□□ -0.16
SNRNP200-208ENST00000497539 NBPF14Q5TI25 921 aa14.05□□□□□ -0.16
SNRNP200-208ENST00000497539 NBPF10Q6P3W6 841 aaKnown RBP14.05□□□□□ -0.16
SNRNP200-208ENST00000497539 NBPF15Q8N660 670 aa14.05□□□□□ -0.16
SNRNP200-208ENST00000497539 TEX13AQ9BXU3 409 aaPredicted RBP14.05□□□□□ -0.16
SNRNP200-208ENST00000497539 DDIT3P35638 169 aa14.04□□□□□ -0.16
SNRNP200-208ENST00000497539 CASP7P55210 303 aa14.04□□□□□ -0.16
SNRNP200-208ENST00000497539 THRAP3Q9Y2W1 955 aaKnown RBP14.04□□□□□ -0.16
SNRNP200-208ENST00000497539 ZNF831Q5JPB2 1677 aa14.04□□□□□ -0.16
SNRNP200-208ENST00000497539 ANKRD36CQ5JPF3 1778 aa14.04□□□□□ -0.16
SNRNP200-208ENST00000497539 MYL6BP14649 208 aa14.04□□□□□ -0.16
SNRNP200-208ENST00000497539 RABEP1Q15276 862 aa14.04□□□□□ -0.16
SNRNP200-208ENST00000497539 PLCD3Q8N3E9 789 aa14.04□□□□□ -0.16
SNRNP200-208ENST00000497539 AIMP1Q12904 312 aaKnown RBP14.03□□□□□ -0.16
SNRNP200-208ENST00000497539 MYD88Q99836 296 aa14.03□□□□□ -0.16
SNRNP200-208ENST00000497539 BICC1Q9H694 974 aaKnown RBP14.03□□□□□ -0.16
SNRNP200-208ENST00000497539 SLIT2O94813 1529 aa14.03□□□□□ -0.16
SNRNP200-208ENST00000497539 TRIM44Q96DX7 344 aaPredicted RBP14.03□□□□□ -0.16
SNRNP200-208ENST00000497539 TMOD3Q9NYL9 352 aa14.03□□□□□ -0.16
SNRNP200-208ENST00000497539 ESYT1Q9BSJ8 1104 aa14.02□□□□□ -0.16
SNRNP200-208ENST00000497539 CHMLP26374 656 aa14.02□□□□□ -0.17
SNRNP200-208ENST00000497539 COPRSQ9NQ92 184 aa14.02□□□□□ -0.17
SNRNP200-208ENST00000497539 MAP7D2Q96T17 732 aa14.01□□□□□ -0.17
SNRNP200-208ENST00000497539 KCNG1Q9UIX4 513 aa14.01□□□□□ -0.17
SNRNP200-208ENST00000497539 H7C1W4 665 aa14.01□□□□□ -0.17
SNRNP200-208ENST00000497539 RFX5P48382 616 aaPredicted RBP14.01□□□□□ -0.17
SNRNP200-208ENST00000497539 CNPY4Q8N129 248 aa14.01□□□□□ -0.17
SNRNP200-208ENST00000497539 DDX54Q8TDD1 881 aaKnown RBP14.01□□□□□ -0.17
SNRNP200-208ENST00000497539 SSFA2P28290 1259 aa14□□□□□ -0.17
SNRNP200-208ENST00000497539 IL1RAPL2Q9NP60 686 aa14□□□□□ -0.17
SNRNP200-208ENST00000497539 GLRX3O76003 335 aaKnown RBP14□□□□□ -0.17
SNRNP200-208ENST00000497539 MMP14P50281 582 aa14□□□□□ -0.17
SNRNP200-208ENST00000497539 CLASRPQ8N2M8 674 aaKnown RBP14□□□□□ -0.17
SNRNP200-208ENST00000497539 CIZ1Q9ULV3 898 aaPredicted RBP14□□□□□ -0.17
SNRNP200-208ENST00000497539 ANAPC15P60006 121 aa13.99□□□□□ -0.17
SNRNP200-208ENST00000497539 RAB3GAP1Q15042 981 aa13.99□□□□□ -0.17
SNRNP200-208ENST00000497539 GBP4Q96PP9 640 aa13.99□□□□□ -0.17
SNRNP200-208ENST00000497539 SPATA31A1Q5TZJ5 1347 aa13.99□□□□□ -0.17
SNRNP200-208ENST00000497539 TRIM28Q13263 835 aaKnown RBP13.99□□□□□ -0.17
SNRNP200-208ENST00000497539 PIGBQ92521 554 aa13.99□□□□□ -0.17
SNRNP200-208ENST00000497539 ATG3Q9NT62 314 aa13.99□□□□□ -0.17
SNRNP200-208ENST00000497539 NUTM1Q86Y26 1132 aa13.98□□□□□ -0.17
SNRNP200-208ENST00000497539 CCDC191Q8NCU4 936 aa13.98□□□□□ -0.17
SNRNP200-208ENST00000497539 GPATCH3Q96I76 525 aa13.98□□□□□ -0.17
SNRNP200-208ENST00000497539 ECHDC1Q9NTX5 307 aa13.98□□□□□ -0.17
SNRNP200-208ENST00000497539 K7ELQ4 463 aaPredicted RBP13.98□□□□□ -0.17
SNRNP200-208ENST00000497539 SASH1O94885 1247 aa13.98□□□□□ -0.17
SNRNP200-208ENST00000497539 EPHA10Q5JZY3 1008 aa13.98□□□□□ -0.17
SNRNP200-208ENST00000497539 ISCA1Q9BUE6 129 aa13.98□□□□□ -0.17
SNRNP200-208ENST00000497539 CNTROBQ8N137 903 aa13.98□□□□□ -0.17
SNRNP200-208ENST00000497539 RFX7Q2KHR2 1363 aa13.97□□□□□ -0.17
SNRNP200-208ENST00000497539 G3BP1Q13283 466 aaKnown RBP eCLIP13.97□□□□□ -0.171e-7■■□□□ 13
SNRNP200-208ENST00000497539 TSHZ3Q63HK5 1081 aa13.97□□□□□ -0.17
SNRNP200-208ENST00000497539 BARGINQ6ZT62 677 aa13.97□□□□□ -0.17
SNRNP200-208ENST00000497539 UNC5CLQ8IV45 518 aa13.97□□□□□ -0.17
SNRNP200-208ENST00000497539 CWC25Q9NXE8 425 aaPredicted RBP13.97□□□□□ -0.17
SNRNP200-208ENST00000497539 OS9Q13438 667 aaPredicted RBP13.97□□□□□ -0.17
SNRNP200-208ENST00000497539 PPP4R3BQ5MIZ7 849 aa13.97□□□□□ -0.17
SNRNP200-208ENST00000497539 SPATA31A5Q5VU36 1347 aa13.96□□□□□ -0.17
SNRNP200-208ENST00000497539 SPATA31A7Q8IWB4 1347 aa13.96□□□□□ -0.17
SNRNP200-208ENST00000497539 A1BGP04217 495 aa13.96□□□□□ -0.17
SNRNP200-208ENST00000497539 FOXO4P98177 505 aa13.96□□□□□ -0.17
SNRNP200-208ENST00000497539 TTLL7Q6ZT98 887 aa13.96□□□□□ -0.17
SNRNP200-208ENST00000497539 SNRKQ9NRH2 765 aa13.96□□□□□ -0.17
SNRNP200-208ENST00000497539 PA2G4Q9UQ80 394 aaKnown RBP13.96□□□□□ -0.17
SNRNP200-208ENST00000497539 EXOC5O00471 708 aa13.96□□□□□ -0.18
SNRNP200-208ENST00000497539 DMTNQ08495 405 aa13.96□□□□□ -0.18
SNRNP200-208ENST00000497539 TICAM2Q86XR7 235 aa13.96□□□□□ -0.18
SNRNP200-208ENST00000497539 SPEF2Q9C093 1822 aa13.95□□□□□ -0.18
SNRNP200-208ENST00000497539 A0A087WZG4 1122 aa13.95□□□□□ -0.18
SNRNP200-208ENST00000497539 PTPN12Q05209 780 aaKnown RBP13.95□□□□□ -0.18
SNRNP200-208ENST00000497539 COL5A3P25940 1745 aaPredicted RBP13.95□□□□□ -0.18
SNRNP200-208ENST00000497539 TRIM6-TRIM34B2RNG4 842 aa13.95□□□□□ -0.18
SNRNP200-208ENST00000497539 STARD3NLO95772 234 aa13.95□□□□□ -0.18
SNRNP200-208ENST00000497539 PLA2G12BQ9BX93 195 aa13.95□□□□□ -0.18
SNRNP200-208ENST00000497539 DDX49Q9Y6V7 483 aaKnown RBP13.95□□□□□ -0.18
SNRNP200-208ENST00000497539 SGSM2O43147 1006 aa13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 IFIT2P09913 472 aaKnown RBP13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 MCCP23508 829 aa13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 PIP4K2AP48426 406 aaPredicted RBP13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 UBE3BQ7Z3V4 1068 aa13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 GPR108Q9NPR9 543 aa13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 ZHX1Q9UKY1 873 aaPredicted RBP13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 ASAP1Q9ULH1 1129 aa13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 TOM1O60784 492 aa13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 TCIRG1Q13488 830 aa13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 RILPL2Q969X0 211 aa13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 EVI5LQ96CN4 794 aa13.94□□□□□ -0.18
SNRNP200-208ENST00000497539 PTCD1O75127 700 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-208ENST00000497539 SKOR2Q2VWA4 1001 aaPredicted RBP13.93□□□□□ -0.18
SNRNP200-208ENST00000497539 AACSQ86V21 672 aa13.93□□□□□ -0.18
SNRNP200-208ENST00000497539 EAF2Q96CJ1 260 aaPredicted RBP13.93□□□□□ -0.18
SNRNP200-208ENST00000497539 RAD50Q92878 1312 aa13.93□□□□□ -0.18
SNRNP200-208ENST00000497539 HIP1O00291 1037 aa13.93□□□□□ -0.18
SNRNP200-208ENST00000497539 CYP19A1P11511 503 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms