RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 C9orf78Q9NZ63 289 aaPredicted RBP12.54□□□□□ -0.4
C4A-258ENST00000496659 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
C4A-258ENST00000496659 UBTFL1P0CB47 393 aaPredicted RBP12.53□□□□□ -0.4
C4A-258ENST00000496659 TRIM28Q13263 835 aaKnown RBP12.53□□□□□ -0.4
C4A-258ENST00000496659 USPL1Q5W0Q7 1092 aa12.53□□□□□ -0.4
C4A-258ENST00000496659 ISCA1Q9BUE6 129 aa12.53□□□□□ -0.4
C4A-258ENST00000496659 COL24A1Q17RW2 1714 aa12.52□□□□□ -0.41
C4A-258ENST00000496659 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
C4A-258ENST00000496659 GRM8O00222 908 aa12.52□□□□□ -0.41
C4A-258ENST00000496659 IGKV5-2P06315 115 aa12.52□□□□□ -0.41
C4A-258ENST00000496659 HSP90B1P14625 803 aaKnown RBP12.52□□□□□ -0.41
C4A-258ENST00000496659 GCKRQ14397 625 aa12.52□□□□□ -0.41
C4A-258ENST00000496659 HLFQ16534 295 aa12.52□□□□□ -0.41
C4A-258ENST00000496659 CWF19L2Q2TBE0 894 aaKnown RBP12.52□□□□□ -0.41
C4A-258ENST00000496659 MSL1Q68DK7 614 aa12.52□□□□□ -0.41
C4A-258ENST00000496659 PPP1R42Q7Z4L9 355 aa12.52□□□□□ -0.41
C4A-258ENST00000496659 ATP5J2-PTCD1G3V325 749 aa12.51□□□□□ -0.41
C4A-258ENST00000496659 ZBTB7BO15156 539 aaPredicted RBP12.51□□□□□ -0.41
C4A-258ENST00000496659 GNAI2P04899 355 aa12.51□□□□□ -0.41
C4A-258ENST00000496659 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
C4A-258ENST00000496659 KLHL34Q8N239 644 aa12.51□□□□□ -0.41
C4A-258ENST00000496659 NIP7Q9Y221 180 aaKnown RBP eCLIP12.51□□□□□ -0.41not detected■□□□□ 9.7
C4A-258ENST00000496659 NUP98P52948 1817 aa12.51□□□□□ -0.41
C4A-258ENST00000496659 NLRP10Q86W26 655 aa12.5□□□□□ -0.41
C4A-258ENST00000496659 NLGN2Q8NFZ4 835 aa12.5□□□□□ -0.41
C4A-258ENST00000496659 SETDB2Q96T68 719 aa12.5□□□□□ -0.41
C4A-258ENST00000496659 MEIS3Q99687 375 aa12.5□□□□□ -0.41
C4A-258ENST00000496659 NYXQ9GZU5 481 aa12.5□□□□□ -0.41
C4A-258ENST00000496659 ZBTB40Q9NUA8 1239 aa12.5□□□□□ -0.41
C4A-258ENST00000496659 SRP68Q9UHB9 627 aaKnown RBP12.5□□□□□ -0.41
C4A-258ENST00000496659 GTF3C3Q9Y5Q9 886 aa12.5□□□□□ -0.41
C4A-258ENST00000496659 UTYO14607 1347 aa12.5□□□□□ -0.41
C4A-258ENST00000496659 CARMIL3Q8ND23 1372 aa12.5□□□□□ -0.41
C4A-258ENST00000496659 PCCAP05165 728 aaPredicted RBP12.49□□□□□ -0.41
C4A-258ENST00000496659 GPTP24298 496 aa12.49□□□□□ -0.41
C4A-258ENST00000496659 POLD1P28340 1107 aa12.49□□□□□ -0.41
C4A-258ENST00000496659 NLGN1Q8N2Q7 840 aa12.49□□□□□ -0.41
C4A-258ENST00000496659 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
C4A-258ENST00000496659 USP44Q9H0E7 712 aa12.49□□□□□ -0.41
C4A-258ENST00000496659 PPP4R2Q9NY27 417 aa12.49□□□□□ -0.41
C4A-258ENST00000496659 CDHR2Q9BYE9 1310 aa12.48□□□□□ -0.41
C4A-258ENST00000496659 NPHP1O15259 732 aa12.48□□□□□ -0.41
C4A-258ENST00000496659 GYS1P13807 737 aa12.48□□□□□ -0.41
C4A-258ENST00000496659 UBE3BQ7Z3V4 1068 aa12.48□□□□□ -0.41
C4A-258ENST00000496659 UTP14AQ9BVJ6 771 aaKnown RBP12.48□□□□□ -0.41
C4A-258ENST00000496659 BCL2L12Q9HB09 334 aa12.48□□□□□ -0.41
C4A-258ENST00000496659 TRMT112Q9UI30 125 aaKnown RBP12.48□□□□□ -0.41
C4A-258ENST00000496659 UBN2Q6ZU65 1347 aa12.47□□□□□ -0.41
C4A-258ENST00000496659 SH3TC1Q8TE82 1336 aa12.47□□□□□ -0.41
C4A-258ENST00000496659 HMMRO75330 724 aa12.47□□□□□ -0.41
C4A-258ENST00000496659 NBPF7P0C2Y1 421 aaPredicted RBP12.47□□□□□ -0.41
C4A-258ENST00000496659 GTF2E1P29083 439 aaPredicted RBP12.47□□□□□ -0.41
C4A-258ENST00000496659 TBC1D9BQ66K14 1250 aa12.47□□□□□ -0.41
C4A-258ENST00000496659 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
C4A-258ENST00000496659 RPAP2Q8IXW5 612 aaPredicted RBP12.47□□□□□ -0.41
C4A-258ENST00000496659 CCDC136Q96JN2 1154 aa12.47□□□□□ -0.41
C4A-258ENST00000496659 UTRNP46939 3433 aa12.46□□□□□ -0.41
C4A-258ENST00000496659 H7C1W4 665 aa12.46□□□□□ -0.41
C4A-258ENST00000496659 GPR162Q16538 588 aa12.46□□□□□ -0.41
C4A-258ENST00000496659 TPTE2Q6XPS3 522 aa12.46□□□□□ -0.41
C4A-258ENST00000496659 NBPF5PQ86XG9 351 aaPredicted RBP12.46□□□□□ -0.41
C4A-258ENST00000496659 LRRFIP2Q9Y608 721 aaKnown RBP12.46□□□□□ -0.41
C4A-258ENST00000496659 CHD4Q14839 1912 aa12.46□□□□□ -0.42
C4A-258ENST00000496659 NTSR2O95665 410 aa12.45□□□□□ -0.42
C4A-258ENST00000496659 ST5P78524 1137 aa12.45□□□□□ -0.42
C4A-258ENST00000496659 NFIXQ14938 502 aa12.45□□□□□ -0.42
C4A-258ENST00000496659 SUSD4Q5VX71 490 aa12.45□□□□□ -0.42
C4A-258ENST00000496659 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
C4A-258ENST00000496659 RWDD1Q9H446 243 aaPredicted RBP12.45□□□□□ -0.42
C4A-258ENST00000496659 C1orf115Q9H7X2 142 aa12.45□□□□□ -0.42
C4A-258ENST00000496659 LAMB2P55268 1798 aa12.45□□□□□ -0.42
C4A-258ENST00000496659 IRS4O14654 1257 aaPredicted RBP12.44□□□□□ -0.42
C4A-258ENST00000496659 ANKRD44Q8N8A2 993 aa12.44□□□□□ -0.42
C4A-258ENST00000496659 CNBD1Q8NA66 436 aa12.44□□□□□ -0.42
C4A-258ENST00000496659 ZNF784Q8NCA9 323 aaPredicted RBP12.44□□□□□ -0.42
C4A-258ENST00000496659 FAM89AQ96GI7 184 aa12.44□□□□□ -0.42
C4A-258ENST00000496659 SUCLG2Q96I99 432 aa12.44□□□□□ -0.42
C4A-258ENST00000496659 PLA2G12BQ9BX93 195 aa12.44□□□□□ -0.42
C4A-258ENST00000496659 PARP3Q9Y6F1 533 aa12.44□□□□□ -0.42
C4A-258ENST00000496659 RIC1Q4ADV7 1423 aa12.44□□□□□ -0.42
C4A-258ENST00000496659 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
C4A-258ENST00000496659 PDE8AO60658 829 aa12.43□□□□□ -0.42
C4A-258ENST00000496659 YBX3P16989 372 aaKnown RBP eCLIP12.43□□□□□ -0.42
C4A-258ENST00000496659 CASP7P55210 303 aa12.43□□□□□ -0.42
C4A-258ENST00000496659 MTX1Q13505 466 aa12.43□□□□□ -0.42
C4A-258ENST00000496659 CEP85Q6P2H3 762 aa12.43□□□□□ -0.42
C4A-258ENST00000496659 SERPINB2P05120 415 aa12.42□□□□□ -0.42
C4A-258ENST00000496659 TM4SF1P30408 202 aa12.42□□□□□ -0.42
C4A-258ENST00000496659 CTSWP56202 376 aa12.42□□□□□ -0.42
C4A-258ENST00000496659 HDAC1Q13547 482 aaPredicted RBP12.42□□□□□ -0.42
C4A-258ENST00000496659 RTL5Q5HYW3 569 aaPredicted RBP12.42□□□□□ -0.42
C4A-258ENST00000496659 BICC1Q9H694 974 aaKnown RBP12.42□□□□□ -0.42
C4A-258ENST00000496659 CHMP3Q9Y3E7 222 aa12.42□□□□□ -0.42
C4A-258ENST00000496659 POLRMTO00411 1230 aaKnown RBP12.41□□□□□ -0.42
C4A-258ENST00000496659 SRGAP3O43295 1099 aa12.41□□□□□ -0.42
C4A-258ENST00000496659 MMP10P09238 476 aa12.41□□□□□ -0.42
C4A-258ENST00000496659 ATP8B2P98198 1209 aa12.41□□□□□ -0.42
C4A-258ENST00000496659 RABL6Q3YEC7 729 aaPredicted RBP12.41□□□□□ -0.42
C4A-258ENST00000496659 CENPQQ7L2Z9 268 aaPredicted RBP12.41□□□□□ -0.42
C4A-258ENST00000496659 PCDHB15Q9Y5E8 787 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms