RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 NEUROD6Q96NK8 337 aa13.88□□□□□ -0.19
CDCA7-208ENST00000496441 FMNL2Q96PY5 1086 aa13.88□□□□□ -0.19
CDCA7-208ENST00000496441 METTL22Q9BUU2 404 aaPredicted RBP13.88□□□□□ -0.19
CDCA7-208ENST00000496441 PDRG1Q9NUG6 133 aa13.88□□□□□ -0.19
CDCA7-208ENST00000496441 RBM8AQ9Y5S9 174 aaKnown RBP13.88□□□□□ -0.19
CDCA7-208ENST00000496441 FIBPO43427 364 aa13.87□□□□□ -0.19
CDCA7-208ENST00000496441 A1BGP04217 495 aa13.87□□□□□ -0.19
CDCA7-208ENST00000496441 NAP1L5Q96NT1 182 aaPredicted RBP13.87□□□□□ -0.19
CDCA7-208ENST00000496441 SMC3Q9UQE7 1217 aa13.87□□□□□ -0.19
CDCA7-208ENST00000496441 CNPY2Q9Y2B0 182 aa13.87□□□□□ -0.19
CDCA7-208ENST00000496441 NCAPD2Q15021 1401 aa13.87□□□□□ -0.19
CDCA7-208ENST00000496441 HEG1Q9ULI3 1381 aa13.87□□□□□ -0.19
CDCA7-208ENST00000496441 VPS37CA5D8V6 355 aaPredicted RBP13.87□□□□□ -0.19
CDCA7-208ENST00000496441 DCAF5Q96JK2 942 aa13.87□□□□□ -0.19
CDCA7-208ENST00000496441 LIMCH1Q9UPQ0 1083 aa13.87□□□□□ -0.19
CDCA7-208ENST00000496441 SLIT3O75094 1523 aa13.87□□□□□ -0.19
CDCA7-208ENST00000496441 CCDC129Q6ZRS4 1044 aa13.87□□□□□ -0.19
CDCA7-208ENST00000496441 ZNF589Q86UQ0 364 aaPredicted RBP13.87□□□□□ -0.19
CDCA7-208ENST00000496441 USP48Q86UV5 1035 aa13.87□□□□□ -0.19
CDCA7-208ENST00000496441 ZNF142P52746 1687 aaPredicted RBP13.86□□□□□ -0.19
CDCA7-208ENST00000496441 ESPNB1AK53 854 aa13.86□□□□□ -0.19
CDCA7-208ENST00000496441 ZKSCAN1P17029 563 aaPredicted RBP13.86□□□□□ -0.19
CDCA7-208ENST00000496441 LMBR1LQ6UX01 489 aa13.86□□□□□ -0.19
CDCA7-208ENST00000496441 TTLL7Q6ZT98 887 aa13.86□□□□□ -0.19
CDCA7-208ENST00000496441 DDX46Q7L014 1031 aaKnown RBP13.86□□□□□ -0.19
CDCA7-208ENST00000496441 FERMT3Q86UX7 667 aa13.86□□□□□ -0.19
CDCA7-208ENST00000496441 SEC62Q99442 399 aaKnown RBP13.86□□□□□ -0.19
CDCA7-208ENST00000496441 HDAC5Q9UQL6 1122 aa13.86□□□□□ -0.19
CDCA7-208ENST00000496441 CYP46A1Q9Y6A2 500 aa13.86□□□□□ -0.19
CDCA7-208ENST00000496441 A0A0G2JS52 829 aa13.85□□□□□ -0.19
CDCA7-208ENST00000496441 PPFIA3O75145 1194 aa13.85□□□□□ -0.19
CDCA7-208ENST00000496441 SYT1P21579 422 aa13.85□□□□□ -0.19
CDCA7-208ENST00000496441 CADPS2Q86UW7 1296 aa13.85□□□□□ -0.19
CDCA7-208ENST00000496441 INTS4Q96HW7 963 aaKnown RBP13.85□□□□□ -0.19
CDCA7-208ENST00000496441 TTC14Q96N46 770 aa13.85□□□□□ -0.19
CDCA7-208ENST00000496441 ADAMTSL3P82987 1691 aa13.85□□□□□ -0.19
CDCA7-208ENST00000496441 CCDC171Q6TFL3 1326 aa13.85□□□□□ -0.19
CDCA7-208ENST00000496441 GJB2P29033 226 aa13.85□□□□□ -0.19
CDCA7-208ENST00000496441 CREB3L3Q68CJ9 461 aa13.85□□□□□ -0.19
CDCA7-208ENST00000496441 ZNF594Q96JF6 807 aaPredicted RBP13.85□□□□□ -0.19
CDCA7-208ENST00000496441 DBNDD2Q9BQY9 259 aa13.85□□□□□ -0.19
CDCA7-208ENST00000496441 DBNLQ9UJU6 430 aaKnown RBP13.85□□□□□ -0.19
CDCA7-208ENST00000496441 MST1RQ04912 1400 aa13.85□□□□□ -0.19
CDCA7-208ENST00000496441 WDR33Q9C0J8 1336 aaKnown RBP13.84□□□□□ -0.19
CDCA7-208ENST00000496441 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
CDCA7-208ENST00000496441 N4BP2Q86UW6 1770 aaPredicted RBP13.84□□□□□ -0.19
CDCA7-208ENST00000496441 STX6O43752 255 aa13.84□□□□□ -0.19
CDCA7-208ENST00000496441 TIMM10P62072 90 aa13.84□□□□□ -0.19
CDCA7-208ENST00000496441 PTPN12Q05209 780 aaKnown RBP13.84□□□□□ -0.19
CDCA7-208ENST00000496441 FAM173BQ6P4H8 233 aa13.84□□□□□ -0.19
CDCA7-208ENST00000496441 TRPM3Q9HCF6 1732 aaPredicted RBP13.83□□□□□ -0.19
CDCA7-208ENST00000496441 NBPF26B4DH59 902 aa13.83□□□□□ -0.2
CDCA7-208ENST00000496441 ME3Q16798 604 aa13.83□□□□□ -0.2
CDCA7-208ENST00000496441 NBPF14Q5TI25 921 aa13.83□□□□□ -0.2
CDCA7-208ENST00000496441 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.2
CDCA7-208ENST00000496441 NBPF15Q8N660 670 aa13.83□□□□□ -0.2
CDCA7-208ENST00000496441 LRRC2Q9BYS8 371 aa13.83□□□□□ -0.2
CDCA7-208ENST00000496441 C5P01031 1676 aa13.83□□□□□ -0.2
CDCA7-208ENST00000496441 ZNF445P59923 1031 aa13.83□□□□□ -0.2
CDCA7-208ENST00000496441 FOSBP53539 338 aa13.82□□□□□ -0.2
CDCA7-208ENST00000496441 EVA1CP58658 441 aa13.82□□□□□ -0.2
CDCA7-208ENST00000496441 ZCRB1Q8TBF4 217 aaKnown RBP13.82□□□□□ -0.2
CDCA7-208ENST00000496441 TPCN1Q9ULQ1 816 aa13.82□□□□□ -0.2
CDCA7-208ENST00000496441 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.82□□□□□ -0.2
CDCA7-208ENST00000496441 RPAP1Q9BWH6 1393 aaPredicted RBP13.82□□□□□ -0.2
CDCA7-208ENST00000496441 SLC27A2O14975 620 aa13.82□□□□□ -0.2
CDCA7-208ENST00000496441 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
CDCA7-208ENST00000496441 NECTIN1Q15223 517 aa13.82□□□□□ -0.2
CDCA7-208ENST00000496441 TNNI3KQ59H18 835 aa13.82□□□□□ -0.2
CDCA7-208ENST00000496441 TAOK2Q9UL54 1235 aa13.82□□□□□ -0.2
CDCA7-208ENST00000496441 FPGT-TNNI3KV9GXZ4 949 aa13.82□□□□□ -0.2
CDCA7-208ENST00000496441 USP42Q9H9J4 1324 aaKnown RBP13.82□□□□□ -0.2
CDCA7-208ENST00000496441 ZSCAN22P10073 491 aaPredicted RBP13.81□□□□□ -0.2
CDCA7-208ENST00000496441 DNM1Q05193 864 aaKnown RBP13.81□□□□□ -0.2
CDCA7-208ENST00000496441 BRINP3Q76B58 766 aa13.81□□□□□ -0.2
CDCA7-208ENST00000496441 NAP1L2Q9ULW6 460 aaPredicted RBP13.81□□□□□ -0.2
CDCA7-208ENST00000496441 SPATA31A3Q5VYP0 1347 aa13.81□□□□□ -0.2
CDCA7-208ENST00000496441 CCDC173Q0VFZ6 552 aa13.8□□□□□ -0.2
CDCA7-208ENST00000496441 LRSAM1Q6UWE0 723 aa13.8□□□□□ -0.2
CDCA7-208ENST00000496441 LRP10Q7Z4F1 713 aa13.8□□□□□ -0.2
CDCA7-208ENST00000496441 UTYO14607 1347 aa13.8□□□□□ -0.2
CDCA7-208ENST00000496441 BLOC1S2Q6QNY1 142 aa13.8□□□□□ -0.2
CDCA7-208ENST00000496441 PHRF1Q9P1Y6 1649 aaKnown RBP13.8□□□□□ -0.2
CDCA7-208ENST00000496441 GOLIM4O00461 696 aa13.8□□□□□ -0.2
CDCA7-208ENST00000496441 MBD3O95983 291 aa13.8□□□□□ -0.2
CDCA7-208ENST00000496441 FGD1P98174 961 aa13.8□□□□□ -0.2
CDCA7-208ENST00000496441 MAP4K1Q92918 833 aa13.8□□□□□ -0.2
CDCA7-208ENST00000496441 ZSWIM6Q9HCJ5 1215 aa13.8□□□□□ -0.2
CDCA7-208ENST00000496441 LRRC24Q50LG9 513 aa13.79□□□□□ -0.2
CDCA7-208ENST00000496441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.79□□□□□ -0.2
CDCA7-208ENST00000496441 F13A1P00488 732 aa13.79□□□□□ -0.2
CDCA7-208ENST00000496441 HSP90B1P14625 803 aaKnown RBP13.79□□□□□ -0.2
CDCA7-208ENST00000496441 ST3GAL1Q11201 340 aa13.79□□□□□ -0.2
CDCA7-208ENST00000496441 VPS53Q5VIR6 699 aa13.79□□□□□ -0.2
CDCA7-208ENST00000496441 LARP1BQ659C4 914 aaKnown RBP13.79□□□□□ -0.2
CDCA7-208ENST00000496441 PLBD2Q8NHP8 589 aa13.79□□□□□ -0.2
CDCA7-208ENST00000496441 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
CDCA7-208ENST00000496441 SNRKQ9NRH2 765 aa13.79□□□□□ -0.2
CDCA7-208ENST00000496441 TNS3Q68CZ2 1445 aa13.79□□□□□ -0.2
CDCA7-208ENST00000496441 CLCN1P35523 988 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms