RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 HSP90AB3PQ58FF7 597 aa25.96■■□□□ 1.75
FGFR1-223ENST00000496296 HSCBQ8IWL3 235 aa25.96■■□□□ 1.75
FGFR1-223ENST00000496296 KAZALD1Q96I82 304 aa25.96■■□□□ 1.75
FGFR1-223ENST00000496296 UPF1Q92900 1129 aaKnown RBP eCLIP25.96■■□□□ 1.75
FGFR1-223ENST00000496296 NHSQ6T4R5 1651 aa25.95■■□□□ 1.75
FGFR1-223ENST00000496296 H7C1W4 665 aa25.95■■□□□ 1.74
FGFR1-223ENST00000496296 FRAT2O75474 233 aaPredicted RBP25.95■■□□□ 1.74
FGFR1-223ENST00000496296 ITPK1Q13572 414 aa25.95■■□□□ 1.74
FGFR1-223ENST00000496296 GIGYF2Q6Y7W6 1299 aaKnown RBP25.95■■□□□ 1.74
FGFR1-223ENST00000496296 OTUD7AQ8TE49 926 aaPredicted RBP25.95■■□□□ 1.74
FGFR1-223ENST00000496296 ISCA1Q9BUE6 129 aa25.95■■□□□ 1.74
FGFR1-223ENST00000496296 ZNF831Q5JPB2 1677 aa25.94■■□□□ 1.74
FGFR1-223ENST00000496296 TRIM28Q13263 835 aaKnown RBP25.94■■□□□ 1.74
FGFR1-223ENST00000496296 INTS5Q6P9B9 1019 aaKnown RBP25.94■■□□□ 1.74
FGFR1-223ENST00000496296 DZIP3Q86Y13 1208 aaKnown RBP25.94■■□□□ 1.74
FGFR1-223ENST00000496296 ERVV-1B6SEH8 477 aa25.94■■□□□ 1.74
FGFR1-223ENST00000496296 FAM182BQ5T319 152 aa25.94■■□□□ 1.74
FGFR1-223ENST00000496296 OS9Q13438 667 aaPredicted RBP25.93■■□□□ 1.74
FGFR1-223ENST00000496296 KIF1BPQ96EK5 621 aa25.93■■□□□ 1.74
FGFR1-223ENST00000496296 SLKQ9H2G2 1235 aaPredicted RBP25.93■■□□□ 1.74
FGFR1-223ENST00000496296 EIF5P55010 431 aaKnown RBP25.92■■□□□ 1.74
FGFR1-223ENST00000496296 SDSP20132 328 aa25.91■■□□□ 1.74
FGFR1-223ENST00000496296 CASP7P55210 303 aa25.91■■□□□ 1.74
FGFR1-223ENST00000496296 KRT27Q7Z3Y8 459 aa25.91■■□□□ 1.74
FGFR1-223ENST00000496296 ERC1Q8IUD2 1116 aa25.91■■□□□ 1.74
FGFR1-223ENST00000496296 PDE1AP54750 535 aa25.91■■□□□ 1.74
FGFR1-223ENST00000496296 RHPN1Q8TCX5 695 aa25.91■■□□□ 1.74
FGFR1-223ENST00000496296 JARID2Q92833 1246 aaPredicted RBP25.91■■□□□ 1.74
FGFR1-223ENST00000496296 RABL6Q3YEC7 729 aaPredicted RBP25.9■■□□□ 1.74
FGFR1-223ENST00000496296 DDIT3P35638 169 aa25.89■■□□□ 1.74
FGFR1-223ENST00000496296 CHMP5Q9NZZ3 219 aa25.89■■□□□ 1.74
FGFR1-223ENST00000496296 TBC1D2BQ9UPU7 963 aa25.89■■□□□ 1.74
FGFR1-223ENST00000496296 BTAF1O14981 1849 aa25.89■■□□□ 1.74
FGFR1-223ENST00000496296 RREB1Q92766 1687 aa25.89■■□□□ 1.74
FGFR1-223ENST00000496296 EPHA10Q5JZY3 1008 aa25.89■■□□□ 1.73
FGFR1-223ENST00000496296 STAP2Q9UGK3 403 aa25.89■■□□□ 1.73
FGFR1-223ENST00000496296 AOX1Q06278 1338 aa25.89■■□□□ 1.73
FGFR1-223ENST00000496296 HLFQ16534 295 aa25.88■■□□□ 1.73
FGFR1-223ENST00000496296 PTF1AQ7RTS3 328 aa25.88■■□□□ 1.73
FGFR1-223ENST00000496296 G3BP1Q13283 466 aaKnown RBP eCLIP25.87■■□□□ 1.73
FGFR1-223ENST00000496296 CASC1Q6TDU7 716 aa25.87■■□□□ 1.73
FGFR1-223ENST00000496296 USP26Q9BXU7 913 aa25.87■■□□□ 1.73
FGFR1-223ENST00000496296 COL5A3P25940 1745 aaPredicted RBP25.86■■□□□ 1.73
FGFR1-223ENST00000496296 FAM196AQ6ZSG2 479 aa25.86■■□□□ 1.73
FGFR1-223ENST00000496296 PCCAP05165 728 aaPredicted RBP25.85■■□□□ 1.73
FGFR1-223ENST00000496296 GSE1Q14687 1217 aa25.85■■□□□ 1.73
FGFR1-223ENST00000496296 ZBTB38Q8NAP3 1195 aaPredicted RBP25.85■■□□□ 1.73
FGFR1-223ENST00000496296 LINC00116Q8NCU8 138 aa25.85■■□□□ 1.73
FGFR1-223ENST00000496296 BCL11BQ9C0K0 894 aaPredicted RBP25.85■■□□□ 1.73
FGFR1-223ENST00000496296 IL1RAPL2Q9NP60 686 aa25.85■■□□□ 1.73
FGFR1-223ENST00000496296 PA2G4Q9UQ80 394 aaKnown RBP25.85■■□□□ 1.73
FGFR1-223ENST00000496296 CNTNAP4Q9C0A0 1308 aa25.85■■□□□ 1.73
FGFR1-223ENST00000496296 MX1P20591 662 aa25.85■■□□□ 1.73
FGFR1-223ENST00000496296 FOXO4P98177 505 aa25.84■■□□□ 1.73
FGFR1-223ENST00000496296 LMBR1LQ6UX01 489 aa25.84■■□□□ 1.73
FGFR1-223ENST00000496296 CCNL1Q9UK58 526 aaPredicted RBP25.84■■□□□ 1.73
FGFR1-223ENST00000496296 CIZ1Q9ULV3 898 aaPredicted RBP25.84■■□□□ 1.73
FGFR1-223ENST00000496296 SBF2Q86WG5 1849 aa25.83■■□□□ 1.73
FGFR1-223ENST00000496296 NLRP10Q86W26 655 aa25.83■■□□□ 1.73
FGFR1-223ENST00000496296 CLASRPQ8N2M8 674 aaKnown RBP25.83■■□□□ 1.73
FGFR1-223ENST00000496296 GPTP24298 496 aa25.83■■□□□ 1.72
FGFR1-223ENST00000496296 COPRSQ9NQ92 184 aa25.83■■□□□ 1.72
FGFR1-223ENST00000496296 RABEP1Q15276 862 aa25.82■■□□□ 1.72
FGFR1-223ENST00000496296 RC3H1Q5TC82 1133 aaKnown RBP25.82■■□□□ 1.72
FGFR1-223ENST00000496296 CHMP3Q9Y3E7 222 aa25.82■■□□□ 1.72
FGFR1-223ENST00000496296 ANKRD36CQ5JPF3 1778 aa25.82■■□□□ 1.72
FGFR1-223ENST00000496296 REC8O95072 547 aa25.81■■□□□ 1.72
FGFR1-223ENST00000496296 ZNF34Q8IZ26 560 aa25.81■■□□□ 1.72
FGFR1-223ENST00000496296 ZNF652Q9Y2D9 606 aa25.81■■□□□ 1.72
FGFR1-223ENST00000496296 NUP98P52948 1817 aa25.81■■□□□ 1.72
FGFR1-223ENST00000496296 MYH14Q7Z406 1995 aaKnown RBP25.8■■□□□ 1.72
FGFR1-223ENST00000496296 CDHR2Q9BYE9 1310 aa25.8■■□□□ 1.72
FGFR1-223ENST00000496296 RFX5P48382 616 aaPredicted RBP25.8■■□□□ 1.72
FGFR1-223ENST00000496296 FAM89AQ96GI7 184 aa25.8■■□□□ 1.72
FGFR1-223ENST00000496296 SIL1Q9H173 461 aa25.8■■□□□ 1.72
FGFR1-223ENST00000496296 CAMTA2O94983 1202 aa25.79■■□□□ 1.72
FGFR1-223ENST00000496296 KCNQ4P56696 695 aa25.79■■□□□ 1.72
FGFR1-223ENST00000496296 PLA2G12BQ9BX93 195 aa25.79■■□□□ 1.72
FGFR1-223ENST00000496296 K7ELQ4 463 aaPredicted RBP25.79■■□□□ 1.72
FGFR1-223ENST00000496296 ERC2O15083 957 aa25.79■■□□□ 1.72
FGFR1-223ENST00000496296 TRMT112Q9UI30 125 aaKnown RBP25.79■■□□□ 1.72
FGFR1-223ENST00000496296 PTPN12Q05209 780 aaKnown RBP25.78■■□□□ 1.72
FGFR1-223ENST00000496296 NUTM1Q86Y26 1132 aa25.78■■□□□ 1.72
FGFR1-223ENST00000496296 KLHDC4Q8TBB5 520 aa25.78■■□□□ 1.72
FGFR1-223ENST00000496296 AK9Q5TCS8 1911 aa25.77■■□□□ 1.72
FGFR1-223ENST00000496296 LY75O60449 1722 aa25.77■■□□□ 1.72
FGFR1-223ENST00000496296 IFIT2P09913 472 aaKnown RBP25.77■■□□□ 1.72
FGFR1-223ENST00000496296 PARP10Q53GL7 1025 aa25.77■■□□□ 1.72
FGFR1-223ENST00000496296 RPS6KA4O75676 772 aa25.76■■□□□ 1.71
FGFR1-223ENST00000496296 SASH1O94885 1247 aa25.76■■□□□ 1.71
FGFR1-223ENST00000496296 CLEC4GQ6UXB4 293 aa25.76■■□□□ 1.71
FGFR1-223ENST00000496296 RGL2O15211 777 aa25.75■■□□□ 1.71
FGFR1-223ENST00000496296 GPATCH3Q96I76 525 aa25.75■■□□□ 1.71
FGFR1-223ENST00000496296 CD2BP2O95400 341 aaKnown RBP25.74■■□□□ 1.71
FGFR1-223ENST00000496296 TTC41PQ6P2S7 1318 aa25.74■■□□□ 1.71
FGFR1-223ENST00000496296 UBN2Q6ZU65 1347 aa25.74■■□□□ 1.71
FGFR1-223ENST00000496296 EPB41L2O43491 1005 aaKnown RBP25.74■■□□□ 1.71
FGFR1-223ENST00000496296 CCDC57Q2TAC2 916 aa25.74■■□□□ 1.71
FGFR1-223ENST00000496296 CCDC125Q86Z20 511 aa25.74■■□□□ 1.71
FGFR1-223ENST00000496296 USP42Q9H9J4 1324 aaKnown RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms