RNA–Protein interactions for RNA: ENST00000495728.1

RPL35-205, Transcript of ribosomal protein L35, humanhuman

TSL 2

Gene RPL35, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-205ENST00000495728 TCIRG1Q13488 830 aa20.81■□□□□ 0.92
RPL35-205ENST00000495728 NCBP3Q53F19 620 aaKnown RBP20.81■□□□□ 0.92
RPL35-205ENST00000495728 UTP14AQ9BVJ6 771 aaKnown RBP20.81■□□□□ 0.92
RPL35-205ENST00000495728 MRS2Q9HD23 443 aa20.81■□□□□ 0.92
RPL35-205ENST00000495728 CCDC93Q567U6 631 aa20.8■□□□□ 0.92
RPL35-205ENST00000495728 HYPKQ9NX55 129 aa20.8■□□□□ 0.92
RPL35-205ENST00000495728 RNF123Q5XPI4 1314 aa20.79■□□□□ 0.92
RPL35-205ENST00000495728 NLRP10Q86W26 655 aa20.79■□□□□ 0.92
RPL35-205ENST00000495728 PLBD2Q8NHP8 589 aa20.79■□□□□ 0.92
RPL35-205ENST00000495728 RRAGCQ9HB90 399 aa20.79■□□□□ 0.92
RPL35-205ENST00000495728 TNRC6CQ9HCJ0 1690 aaKnown RBP20.79■□□□□ 0.92
RPL35-205ENST00000495728 CCDC88AQ3V6T2 1871 aa20.79■□□□□ 0.92
RPL35-205ENST00000495728 HSPA6P17066 643 aa20.78■□□□□ 0.92
RPL35-205ENST00000495728 ANKRD13DQ6ZTN6 518 aa20.78■□□□□ 0.92
RPL35-205ENST00000495728 RTKN2Q8IZC4 609 aa20.78■□□□□ 0.92
RPL35-205ENST00000495728 OLFM4Q6UX06 510 aa20.77■□□□□ 0.92
RPL35-205ENST00000495728 C3orf67Q6ZVT6 689 aa20.77■□□□□ 0.92
RPL35-205ENST00000495728 WWC1Q8IX03 1113 aa20.77■□□□□ 0.92
RPL35-205ENST00000495728 C8orf58Q8NAV2 365 aa20.77■□□□□ 0.92
RPL35-205ENST00000495728 RBM46Q8TBY0 533 aaKnown RBP20.77■□□□□ 0.92
RPL35-205ENST00000495728 RPGRQ92834 1020 aaKnown RBP20.77■□□□□ 0.92
RPL35-205ENST00000495728 NLRP3Q96P20 1036 aa20.77■□□□□ 0.92
RPL35-205ENST00000495728 CRAMP1Q96RY5 1269 aa20.77■□□□□ 0.92
RPL35-205ENST00000495728 CACNA1SQ13698 1873 aa20.77■□□□□ 0.92
RPL35-205ENST00000495728 FKBP4Q02790 459 aaKnown RBP eCLIP20.76■□□□□ 0.91
RPL35-205ENST00000495728 CC2D2BQ6DHV5 1058 aa20.76■□□□□ 0.91
RPL35-205ENST00000495728 RBM17Q96I25 401 aaKnown RBP20.76■□□□□ 0.91
RPL35-205ENST00000495728 DICER1Q9UPY3 1922 aaKnown RBP20.76■□□□□ 0.91
RPL35-205ENST00000495728 ELL2O00472 640 aaPredicted RBP20.75■□□□□ 0.91
RPL35-205ENST00000495728 DPY19L2Q6NUT2 758 aa20.75■□□□□ 0.91
RPL35-205ENST00000495728 ISCA1Q9BUE6 129 aa20.75■□□□□ 0.91
RPL35-205ENST00000495728 CHMP4AQ9BY43 222 aa20.75■□□□□ 0.91
RPL35-205ENST00000495728 VEGFAP15692 232 aaPredicted RBP20.74■□□□□ 0.91
RPL35-205ENST00000495728 C16orf71Q8IYS4 520 aaPredicted RBP20.74■□□□□ 0.91
RPL35-205ENST00000495728 SNED1Q8TER0 1413 aa20.74■□□□□ 0.91
RPL35-205ENST00000495728 TRMT112Q9UI30 125 aaKnown RBP20.74■□□□□ 0.91
RPL35-205ENST00000495728 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
RPL35-205ENST00000495728 TRIM28Q13263 835 aaKnown RBP20.73■□□□□ 0.91
RPL35-205ENST00000495728 GRIPAP1Q4V328 841 aa20.73■□□□□ 0.91
RPL35-205ENST00000495728 IL16Q14005 1332 aa20.73■□□□□ 0.91
RPL35-205ENST00000495728 SH3TC1Q8TE82 1336 aa20.73■□□□□ 0.91
RPL35-205ENST00000495728 ANKRD36CQ5JPF3 1778 aa20.72■□□□□ 0.91
RPL35-205ENST00000495728 POTECB2RU33 542 aa20.72■□□□□ 0.91
RPL35-205ENST00000495728 FSTL1Q12841 308 aa20.72■□□□□ 0.91
RPL35-205ENST00000495728 SYNE4Q8N205 404 aa20.72■□□□□ 0.91
RPL35-205ENST00000495728 PSMD1Q99460 953 aa20.72■□□□□ 0.91
RPL35-205ENST00000495728 ZNF277Q9NRM2 450 aaPredicted RBP20.72■□□□□ 0.91
RPL35-205ENST00000495728 HCLS1P14317 486 aaPredicted RBP20.71■□□□□ 0.91
RPL35-205ENST00000495728 CCDC30Q5VVM6 783 aa20.71■□□□□ 0.91
RPL35-205ENST00000495728 TSPYL6Q8N831 410 aa20.71■□□□□ 0.91
RPL35-205ENST00000495728 PHAXQ9H814 394 aaKnown RBP20.71■□□□□ 0.91
RPL35-205ENST00000495728 TSR2Q969E8 191 aaKnown RBP20.7■□□□□ 0.9
RPL35-205ENST00000495728 ATP5J2-PTCD1G3V325 749 aa20.69■□□□□ 0.9
RPL35-205ENST00000495728 PPEF1O14829 653 aaPredicted RBP20.69■□□□□ 0.9
RPL35-205ENST00000495728 WDR90Q96KV7 1748 aa20.68■□□□□ 0.9
RPL35-205ENST00000495728 BBOX1O75936 387 aa20.68■□□□□ 0.9
RPL35-205ENST00000495728 IARSP41252 1262 aaKnown RBP20.68■□□□□ 0.9
RPL35-205ENST00000495728 GOLGA2Q08379 1002 aa20.68■□□□□ 0.9
RPL35-205ENST00000495728 RIC3Q7Z5B4 369 aa20.68■□□□□ 0.9
RPL35-205ENST00000495728 WDR63Q8IWG1 891 aa20.68■□□□□ 0.9
RPL35-205ENST00000495728 ATP6V0A2Q9Y487 856 aa20.68■□□□□ 0.9
RPL35-205ENST00000495728 ABCC4O15439 1325 aa20.68■□□□□ 0.9
RPL35-205ENST00000495728 DDNO94850 711 aaPredicted RBP20.67■□□□□ 0.9
RPL35-205ENST00000495728 APLP1P51693 650 aa20.67■□□□□ 0.9
RPL35-205ENST00000495728 SMC1BQ8NDV3 1235 aa20.67■□□□□ 0.9
RPL35-205ENST00000495728 FZD9O00144 591 aa20.66■□□□□ 0.9
RPL35-205ENST00000495728 FAM89AQ96GI7 184 aa20.66■□□□□ 0.9
RPL35-205ENST00000495728 SF3B3Q15393 1217 aaKnown RBP20.65■□□□□ 0.9
RPL35-205ENST00000495728 DDX46Q7L014 1031 aaKnown RBP20.65■□□□□ 0.9
RPL35-205ENST00000495728 L3MBTL3Q96JM7 780 aaPredicted RBP20.65■□□□□ 0.9
RPL35-205ENST00000495728 TCERG1O14776 1098 aaKnown RBP20.64■□□□□ 0.89
RPL35-205ENST00000495728 DDX58O95786 925 aaKnown RBP20.64■□□□□ 0.89
RPL35-205ENST00000495728 TWISTNBQ3B726 338 aaPredicted RBP20.64■□□□□ 0.89
RPL35-205ENST00000495728 SLC51AQ86UW1 340 aa20.64■□□□□ 0.89
RPL35-205ENST00000495728 SP8Q8IXZ3 490 aa20.64■□□□□ 0.89
RPL35-205ENST00000495728 ZNF428Q96B54 188 aa20.64■□□□□ 0.89
RPL35-205ENST00000495728 TMX4Q9H1E5 349 aaPredicted RBP20.64■□□□□ 0.89
RPL35-205ENST00000495728 GRAPQ13588 217 aa20.63■□□□□ 0.89
RPL35-205ENST00000495728 ZBTB38Q8NAP3 1195 aaPredicted RBP20.63■□□□□ 0.89
RPL35-205ENST00000495728 CCDC191Q8NCU4 936 aa20.63■□□□□ 0.89
RPL35-205ENST00000495728 GRAPLQ8TC17 118 aaPredicted RBP20.63■□□□□ 0.89
RPL35-205ENST00000495728 JDP2Q8WYK2 163 aa20.63■□□□□ 0.89
RPL35-205ENST00000495728 MYD88Q99836 296 aa20.63■□□□□ 0.89
RPL35-205ENST00000495728 METTL22Q9BUU2 404 aaPredicted RBP20.63■□□□□ 0.89
RPL35-205ENST00000495728 VPS33BQ9H267 617 aa20.63■□□□□ 0.89
RPL35-205ENST00000495728 LAMB2P55268 1798 aa20.62■□□□□ 0.89
RPL35-205ENST00000495728 ZNF541Q9H0D2 1346 aa20.62■□□□□ 0.89
RPL35-205ENST00000495728 FANCIQ9NVI1 1328 aa20.62■□□□□ 0.89
RPL35-205ENST00000495728 TMC4Q7Z404 712 aa20.62■□□□□ 0.89
RPL35-205ENST00000495728 FAM9BQ8IZU0 186 aa20.62■□□□□ 0.89
RPL35-205ENST00000495728 STK31Q9BXU1 1019 aa20.62■□□□□ 0.89
RPL35-205ENST00000495728 RTFDC1Q9BY42 306 aaPredicted RBP20.62■□□□□ 0.89
RPL35-205ENST00000495728 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
RPL35-205ENST00000495728 IQCA1LA6NCM1 817 aa20.61■□□□□ 0.89
RPL35-205ENST00000495728 IRS4O14654 1257 aaPredicted RBP20.61■□□□□ 0.89
RPL35-205ENST00000495728 KSR2Q6VAB6 950 aa20.61■□□□□ 0.89
RPL35-205ENST00000495728 DNAJC5GQ8N7S2 189 aa20.6■□□□□ 0.89
RPL35-205ENST00000495728 MAP3K2Q9Y2U5 619 aa20.6■□□□□ 0.89
RPL35-205ENST00000495728 DDX60Q8IY21 1712 aaKnown RBP20.6■□□□□ 0.89
RPL35-205ENST00000495728 COL4A5P29400 1685 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms