RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ERVV-2B6SEH9 535 aa12.68□□□□□ -0.38
SAMM50-206ENST00000494795 IFIT2P09913 472 aaKnown RBP12.68□□□□□ -0.38
SAMM50-206ENST00000494795 PIP4K2BP78356 416 aa12.68□□□□□ -0.38
SAMM50-206ENST00000494795 RABEP1Q15276 862 aa12.68□□□□□ -0.38
SAMM50-206ENST00000494795 G3BP1Q13283 466 aaKnown RBP eCLIP12.67□□□□□ -0.38
SAMM50-206ENST00000494795 PLBD2Q8NHP8 589 aa12.67□□□□□ -0.38
SAMM50-206ENST00000494795 TMOD3Q9NYL9 352 aa12.67□□□□□ -0.38
SAMM50-206ENST00000494795 ARFGEF2Q9Y6D5 1785 aa12.67□□□□□ -0.38
SAMM50-206ENST00000494795 TAF6LQ9Y6J9 622 aa12.67□□□□□ -0.38
SAMM50-206ENST00000494795 PARP4Q9UKK3 1724 aaKnown RBP12.67□□□□□ -0.38
SAMM50-206ENST00000494795 FOXO4P98177 505 aa12.67□□□□□ -0.38
SAMM50-206ENST00000494795 ROBO1Q9Y6N7 1651 aa12.67□□□□□ -0.38
SAMM50-206ENST00000494795 SGSM2O43147 1006 aa12.66□□□□□ -0.38
SAMM50-206ENST00000494795 ECHDC1Q9NTX5 307 aa12.66□□□□□ -0.38
SAMM50-206ENST00000494795 DBNLQ9UJU6 430 aaKnown RBP12.66□□□□□ -0.38
SAMM50-206ENST00000494795 AFDNP55196 1824 aaKnown RBP12.66□□□□□ -0.38
SAMM50-206ENST00000494795 HLFQ16534 295 aa12.66□□□□□ -0.38
SAMM50-206ENST00000494795 ACSBG1Q96GR2 724 aa12.66□□□□□ -0.38
SAMM50-206ENST00000494795 CHMP4AQ9BY43 222 aa12.66□□□□□ -0.38
SAMM50-206ENST00000494795 PUS3Q9BZE2 481 aaKnown RBP12.66□□□□□ -0.38
SAMM50-206ENST00000494795 LSG1Q9H089 658 aaKnown RBP12.66□□□□□ -0.38
SAMM50-206ENST00000494795 ABCC6O95255 1503 aa12.66□□□□□ -0.38
SAMM50-206ENST00000494795 LRRC24Q50LG9 513 aa12.66□□□□□ -0.38
SAMM50-206ENST00000494795 RAB3GAP1Q15042 981 aa12.65□□□□□ -0.38
SAMM50-206ENST00000494795 BRPF3Q9ULD4 1205 aa12.65□□□□□ -0.38
SAMM50-206ENST00000494795 GPTP24298 496 aa12.65□□□□□ -0.38
SAMM50-206ENST00000494795 ADCK5Q3MIX3 580 aa12.65□□□□□ -0.38
SAMM50-206ENST00000494795 FAM89AQ96GI7 184 aa12.65□□□□□ -0.38
SAMM50-206ENST00000494795 DBNDD2Q9BQY9 259 aa12.65□□□□□ -0.38
SAMM50-206ENST00000494795 PRIM1P49642 420 aaKnown RBP12.64□□□□□ -0.39
SAMM50-206ENST00000494795 SMIM5Q71RC9 77 aa12.64□□□□□ -0.39
SAMM50-206ENST00000494795 IFNLR1Q8IU57 520 aaPredicted RBP12.64□□□□□ -0.39
SAMM50-206ENST00000494795 ZDHHC9Q9Y397 364 aa12.64□□□□□ -0.39
SAMM50-206ENST00000494795 A0A0D9SFI3 127 aa12.64□□□□□ -0.39
SAMM50-206ENST00000494795 KCNQ4P56696 695 aa12.64□□□□□ -0.39
SAMM50-206ENST00000494795 TIMM10P62072 90 aa12.64□□□□□ -0.39
SAMM50-206ENST00000494795 CNTROBQ8N137 903 aa12.64□□□□□ -0.39
SAMM50-206ENST00000494795 TMX3Q96JJ7 454 aa12.64□□□□□ -0.39
SAMM50-206ENST00000494795 ANO8Q9HCE9 1232 aaPredicted RBP12.64□□□□□ -0.39
SAMM50-206ENST00000494795 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
SAMM50-206ENST00000494795 GLRX3O76003 335 aaKnown RBP12.64□□□□□ -0.39
SAMM50-206ENST00000494795 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
SAMM50-206ENST00000494795 HSP90AB4PQ58FF6 505 aa12.64□□□□□ -0.39
SAMM50-206ENST00000494795 AOX1Q06278 1338 aa12.63□□□□□ -0.39
SAMM50-206ENST00000494795 USP42Q9H9J4 1324 aaKnown RBP12.63□□□□□ -0.39
SAMM50-206ENST00000494795 H7C1W4 665 aa12.63□□□□□ -0.39
SAMM50-206ENST00000494795 RABL6Q3YEC7 729 aaPredicted RBP12.63□□□□□ -0.39
SAMM50-206ENST00000494795 ZNF589Q86UQ0 364 aaPredicted RBP12.63□□□□□ -0.39
SAMM50-206ENST00000494795 IL27Q8NEV9 243 aa12.63□□□□□ -0.39
SAMM50-206ENST00000494795 SEC62Q99442 399 aaKnown RBP12.63□□□□□ -0.39
SAMM50-206ENST00000494795 SNX14Q9Y5W7 946 aa12.63□□□□□ -0.39
SAMM50-206ENST00000494795 TNS2Q63HR2 1409 aa12.63□□□□□ -0.39
SAMM50-206ENST00000494795 NMIQ13287 307 aaPredicted RBP12.63□□□□□ -0.39
SAMM50-206ENST00000494795 FOXD4L6Q3SYB3 417 aaPredicted RBP12.63□□□□□ -0.39
SAMM50-206ENST00000494795 FOXD4L3Q6VB84 417 aaPredicted RBP12.63□□□□□ -0.39
SAMM50-206ENST00000494795 COL16A1Q07092 1604 aaPredicted RBP12.63□□□□□ -0.39
SAMM50-206ENST00000494795 HSPA4P34932 840 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 ATG9AQ7Z3C6 839 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 ZBTB1Q9Y2K1 713 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 TRAK2O60296 914 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 TNNI3KQ59H18 835 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 CCDC129Q6ZRS4 1044 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 TCEANC2Q96MN5 208 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 FPGT-TNNI3KV9GXZ4 949 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 TTC41PQ6P2S7 1318 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 COL15A1P39059 1388 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 PRPF40BQ6NWY9 871 aaKnown RBP12.62□□□□□ -0.39
SAMM50-206ENST00000494795 PTF1AQ7RTS3 328 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 COPRSQ9NQ92 184 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
SAMM50-206ENST00000494795 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
SAMM50-206ENST00000494795 LAMB4A4D0S4 1761 aa12.61□□□□□ -0.39
SAMM50-206ENST00000494795 LARGE1O95461 756 aa12.61□□□□□ -0.39
SAMM50-206ENST00000494795 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
SAMM50-206ENST00000494795 DIAPH3Q9NSV4 1193 aa12.61□□□□□ -0.39
SAMM50-206ENST00000494795 RAD50Q92878 1312 aa12.61□□□□□ -0.39
SAMM50-206ENST00000494795 ST18O60284 1047 aa12.61□□□□□ -0.39
SAMM50-206ENST00000494795 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
SAMM50-206ENST00000494795 PAPPAQ13219 1627 aa12.61□□□□□ -0.39
SAMM50-206ENST00000494795 KCNQ2O43526 872 aa12.6□□□□□ -0.39
SAMM50-206ENST00000494795 DDX46Q7L014 1031 aaKnown RBP12.6□□□□□ -0.39
SAMM50-206ENST00000494795 DISP2A7MBM2 1401 aa12.6□□□□□ -0.39
SAMM50-206ENST00000494795 ITGB4P16144 1822 aa12.6□□□□□ -0.39
SAMM50-206ENST00000494795 TJP1Q07157 1748 aa12.6□□□□□ -0.39
SAMM50-206ENST00000494795 FAM177BA6PVY3 158 aa12.6□□□□□ -0.39
SAMM50-206ENST00000494795 ERC1Q8IUD2 1116 aa12.6□□□□□ -0.39
SAMM50-206ENST00000494795 NEUROD6Q96NK8 337 aa12.6□□□□□ -0.39
SAMM50-206ENST00000494795 NUP188Q5SRE5 1749 aa12.6□□□□□ -0.39
SAMM50-206ENST00000494795 A0A0G2JLW4 131 aa12.6□□□□□ -0.39
SAMM50-206ENST00000494795 EXOC5O00471 708 aa12.6□□□□□ -0.39
SAMM50-206ENST00000494795 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.59□□□□□ -0.39
SAMM50-206ENST00000494795 FAM182BQ5T319 152 aa12.59□□□□□ -0.39
SAMM50-206ENST00000494795 FSD1Q9BTV5 496 aa12.59□□□□□ -0.39
SAMM50-206ENST00000494795 CYP19A1P11511 503 aaPredicted RBP12.58□□□□□ -0.39
SAMM50-206ENST00000494795 MARCH10Q8NA82 808 aaPredicted RBP12.58□□□□□ -0.39
SAMM50-206ENST00000494795 BCL9O00512 1426 aa12.58□□□□□ -0.4
SAMM50-206ENST00000494795 TCIRG1Q13488 830 aa12.58□□□□□ -0.4
SAMM50-206ENST00000494795 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
SAMM50-206ENST00000494795 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
SAMM50-206ENST00000494795 CYP2E1P05181 493 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms