RNA–Protein interactions for RNA: ENST00000494722.1

SNX8-209, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-209ENST00000494722 RBM17Q96I25 401 aaKnown RBP23.95■■□□□ 1.42
SNX8-209ENST00000494722 DDX21Q9NR30 783 aaKnown RBP eCLIP23.95■■□□□ 1.42
SNX8-209ENST00000494722 LAS1LQ9Y4W2 734 aaKnown RBP23.95■■□□□ 1.42
SNX8-209ENST00000494722 SCN4AP35499 1836 aa23.95■■□□□ 1.42
SNX8-209ENST00000494722 IQCA1LA6NCM1 817 aa23.94■■□□□ 1.42
SNX8-209ENST00000494722 PROSER3Q2NL68 480 aa23.94■■□□□ 1.42
SNX8-209ENST00000494722 CRAMP1Q96RY5 1269 aa23.94■■□□□ 1.42
SNX8-209ENST00000494722 UTP14AQ9BVJ6 771 aaKnown RBP23.94■■□□□ 1.42
SNX8-209ENST00000494722 DDNO94850 711 aaPredicted RBP23.93■■□□□ 1.42
SNX8-209ENST00000494722 NLRP3Q96P20 1036 aa23.93■■□□□ 1.42
SNX8-209ENST00000494722 PSMD1Q99460 953 aa23.93■■□□□ 1.42
SNX8-209ENST00000494722 ZNF277Q9NRM2 450 aaPredicted RBP23.93■■□□□ 1.42
SNX8-209ENST00000494722 ANXA1P04083 346 aa23.92■■□□□ 1.42
SNX8-209ENST00000494722 IARSP41252 1262 aaKnown RBP23.92■■□□□ 1.42
SNX8-209ENST00000494722 COPS6Q7L5N1 327 aa23.92■■□□□ 1.42
SNX8-209ENST00000494722 SYNE4Q8N205 404 aa23.92■■□□□ 1.42
SNX8-209ENST00000494722 KLRG1Q96E93 195 aa23.92■■□□□ 1.42
SNX8-209ENST00000494722 CFAP44Q96MT7 982 aa23.92■■□□□ 1.42
SNX8-209ENST00000494722 SLC10A5Q5PT55 438 aa23.91■■□□□ 1.42
SNX8-209ENST00000494722 OLFM4Q6UX06 510 aa23.91■■□□□ 1.42
SNX8-209ENST00000494722 XAGE3Q8WTP9 111 aa23.91■■□□□ 1.42
SNX8-209ENST00000494722 NECTIN2Q92692 538 aa23.91■■□□□ 1.42
SNX8-209ENST00000494722 L3MBTL3Q96JM7 780 aaPredicted RBP23.91■■□□□ 1.42
SNX8-209ENST00000494722 TMX4Q9H1E5 349 aaPredicted RBP23.91■■□□□ 1.42
SNX8-209ENST00000494722 CALD1Q05682 793 aaKnown RBP23.9■■□□□ 1.42
SNX8-209ENST00000494722 AIMP1Q12904 312 aaKnown RBP23.9■■□□□ 1.42
SNX8-209ENST00000494722 HDGFL1Q5TGJ6 251 aa23.89■■□□□ 1.41
SNX8-209ENST00000494722 JDP2Q8WYK2 163 aa23.89■■□□□ 1.41
SNX8-209ENST00000494722 SNED1Q8TER0 1413 aa23.89■■□□□ 1.41
SNX8-209ENST00000494722 PPEF1O14829 653 aaPredicted RBP23.88■■□□□ 1.41
SNX8-209ENST00000494722 TCIRG1Q13488 830 aa23.88■■□□□ 1.41
SNX8-209ENST00000494722 KRT24Q2M2I5 525 aa23.88■■□□□ 1.41
SNX8-209ENST00000494722 CHADLQ6NUI6 762 aa23.88■■□□□ 1.41
SNX8-209ENST00000494722 DBF4Q9UBU7 674 aaPredicted RBP23.88■■□□□ 1.41
SNX8-209ENST00000494722 HTRA3P83110 453 aa23.87■■□□□ 1.41
SNX8-209ENST00000494722 NLRP10Q86W26 655 aa23.87■■□□□ 1.41
SNX8-209ENST00000494722 CHPF2Q9P2E5 772 aa23.87■■□□□ 1.41
SNX8-209ENST00000494722 FZD9O00144 591 aa23.86■■□□□ 1.41
SNX8-209ENST00000494722 JMYQ8N9B5 988 aa23.86■■□□□ 1.41
SNX8-209ENST00000494722 PLBD2Q8NHP8 589 aa23.85■■□□□ 1.41
SNX8-209ENST00000494722 HYPKQ9NX55 129 aa23.85■■□□□ 1.41
SNX8-209ENST00000494722 TRMT112Q9UI30 125 aaKnown RBP23.85■■□□□ 1.41
SNX8-209ENST00000494722 SH3TC1Q8TE82 1336 aa23.84■■□□□ 1.41
SNX8-209ENST00000494722 ZNF541Q9H0D2 1346 aa23.84■■□□□ 1.41
SNX8-209ENST00000494722 LAMB2P55268 1798 aa23.84■■□□□ 1.41
SNX8-209ENST00000494722 APAF1O14727 1248 aa23.84■■□□□ 1.41
SNX8-209ENST00000494722 GNAI1P63096 354 aa23.84■■□□□ 1.41
SNX8-209ENST00000494722 DUSP27Q5VZP5 1158 aa23.84■■□□□ 1.41
SNX8-209ENST00000494722 LDHDQ86WU2 507 aa23.84■■□□□ 1.41
SNX8-209ENST00000494722 GPC2Q8N158 579 aa23.84■■□□□ 1.41
SNX8-209ENST00000494722 TAF1DQ9H5J8 278 aaPredicted RBP23.84■■□□□ 1.41
SNX8-209ENST00000494722 IFT57Q9NWB7 429 aa23.84■■□□□ 1.41
SNX8-209ENST00000494722 HACL1Q9UJ83 578 aa23.84■■□□□ 1.41
SNX8-209ENST00000494722 ZNF853P0CG23 659 aa23.83■■□□□ 1.41
SNX8-209ENST00000494722 EIF6P56537 245 aaKnown RBP23.83■■□□□ 1.41
SNX8-209ENST00000494722 ANKRD13DQ6ZTN6 518 aa23.83■■□□□ 1.41
SNX8-209ENST00000494722 C3orf67Q6ZVT6 689 aa23.83■■□□□ 1.41
SNX8-209ENST00000494722 CHMP4AQ9BY43 222 aa23.83■■□□□ 1.41
SNX8-209ENST00000494722 VPS33BQ9H267 617 aa23.83■■□□□ 1.41
SNX8-209ENST00000494722 MBIPQ9NS73 344 aa23.83■■□□□ 1.41
SNX8-209ENST00000494722 ATP6V0A2Q9Y487 856 aa23.83■■□□□ 1.41
SNX8-209ENST00000494722 BBOX1O75936 387 aa23.82■■□□□ 1.4
SNX8-209ENST00000494722 PNMA8AQ86V59 439 aaPredicted RBP23.81■■□□□ 1.4
SNX8-209ENST00000494722 LARGE2Q8N3Y3 721 aa23.81■■□□□ 1.4
SNX8-209ENST00000494722 ABCC4O15439 1325 aa23.81■■□□□ 1.4
SNX8-209ENST00000494722 TCERG1O14776 1098 aaKnown RBP23.8■■□□□ 1.4
SNX8-209ENST00000494722 IFFO2Q5TF58 517 aa23.8■■□□□ 1.4
SNX8-209ENST00000494722 DDX46Q7L014 1031 aaKnown RBP23.8■■□□□ 1.4
SNX8-209ENST00000494722 SUPT20HQ8NEM7 779 aa23.8■■□□□ 1.4
SNX8-209ENST00000494722 HCLS1P14317 486 aaPredicted RBP23.79■■□□□ 1.4
SNX8-209ENST00000494722 EPHX2P34913 555 aa23.79■■□□□ 1.4
SNX8-209ENST00000494722 TMC4Q7Z404 712 aa23.79■■□□□ 1.4
SNX8-209ENST00000494722 POTEIP0CG38 1075 aa23.78■■□□□ 1.4
SNX8-209ENST00000494722 POTEJP0CG39 1038 aa23.78■■□□□ 1.4
SNX8-209ENST00000494722 SP8Q8IXZ3 490 aa23.78■■□□□ 1.4
SNX8-209ENST00000494722 ISCA1Q9BUE6 129 aa23.78■■□□□ 1.4
SNX8-209ENST00000494722 CREBZFQ9NS37 354 aa23.78■■□□□ 1.4
SNX8-209ENST00000494722 EAPPQ56P03 285 aaPredicted RBP23.77■■□□□ 1.4
SNX8-209ENST00000494722 NIM1KQ8IY84 436 aa23.77■■□□□ 1.4
SNX8-209ENST00000494722 ZNF316A6NFI3 1004 aaPredicted RBP23.76■■□□□ 1.39
SNX8-209ENST00000494722 PPIP5K2O43314 1243 aa23.76■■□□□ 1.39
SNX8-209ENST00000494722 LMOD1P29536 600 aaPredicted RBP23.76■■□□□ 1.39
SNX8-209ENST00000494722 TRIM28Q13263 835 aaKnown RBP23.76■■□□□ 1.39
SNX8-209ENST00000494722 GRAPQ13588 217 aa23.76■■□□□ 1.39
SNX8-209ENST00000494722 GRAPLQ8TC17 118 aaPredicted RBP23.76■■□□□ 1.39
SNX8-209ENST00000494722 DDX60Q8IY21 1712 aaKnown RBP23.76■■□□□ 1.39
SNX8-209ENST00000494722 GOLGA2Q08379 1002 aa23.75■■□□□ 1.39
SNX8-209ENST00000494722 RTFDC1Q9BY42 306 aaPredicted RBP23.75■■□□□ 1.39
SNX8-209ENST00000494722 CLEC11AQ9Y240 323 aa23.75■■□□□ 1.39
SNX8-209ENST00000494722 GJA3Q9Y6H8 435 aa23.75■■□□□ 1.39
SNX8-209ENST00000494722 COL4A5P29400 1685 aa23.75■■□□□ 1.39
SNX8-209ENST00000494722 ADAMTSL1Q8N6G6 1762 aa23.75■■□□□ 1.39
SNX8-209ENST00000494722 DPP8Q6V1X1 898 aaPredicted RBP23.74■■□□□ 1.39
SNX8-209ENST00000494722 RIC3Q7Z5B4 369 aa23.74■■□□□ 1.39
SNX8-209ENST00000494722 PASKQ96RG2 1323 aa23.74■■□□□ 1.39
SNX8-209ENST00000494722 PCNTO95613 3336 aa23.73■■□□□ 1.39
SNX8-209ENST00000494722 ATP5J2-PTCD1G3V325 749 aa23.73■■□□□ 1.39
SNX8-209ENST00000494722 HSP90B1P14625 803 aaKnown RBP23.73■■□□□ 1.39
SNX8-209ENST00000494722 MPNDQ8N594 471 aa23.73■■□□□ 1.39
SNX8-209ENST00000494722 SF3B3Q15393 1217 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms