RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 ERFEQ4G0M1 354 aa26.65■■□□□ 1.86
CCDC12-207ENST00000494655 PHAXQ9H814 394 aaKnown RBP26.65■■□□□ 1.86
CCDC12-207ENST00000494655 NPR1P16066 1061 aa26.64■■□□□ 1.86
CCDC12-207ENST00000494655 E9PSI1 815 aa26.63■■□□□ 1.85
CCDC12-207ENST00000494655 NLRP10Q86W26 655 aa26.63■■□□□ 1.85
CCDC12-207ENST00000494655 RPGRQ92834 1020 aaKnown RBP26.62■■□□□ 1.85
CCDC12-207ENST00000494655 SPINK5Q9NQ38 1064 aaPredicted RBP26.62■■□□□ 1.85
CCDC12-207ENST00000494655 TRMT112Q9UI30 125 aaKnown RBP26.62■■□□□ 1.85
CCDC12-207ENST00000494655 TCERG1O14776 1098 aaKnown RBP26.61■■□□□ 1.85
CCDC12-207ENST00000494655 SLC4A2P04920 1241 aa26.61■■□□□ 1.85
CCDC12-207ENST00000494655 SH3TC1Q8TE82 1336 aa26.61■■□□□ 1.85
CCDC12-207ENST00000494655 KLRG2A4D1S0 409 aaPredicted RBP26.6■■□□□ 1.85
CCDC12-207ENST00000494655 SOGA3Q5TF21 947 aa26.6■■□□□ 1.85
CCDC12-207ENST00000494655 PRPF40BQ6NWY9 871 aaKnown RBP26.59■■□□□ 1.85
CCDC12-207ENST00000494655 NLRP3Q96P20 1036 aa26.59■■□□□ 1.85
CCDC12-207ENST00000494655 ATP5J2-PTCD1G3V325 749 aa26.58■■□□□ 1.85
CCDC12-207ENST00000494655 VAMP4O75379 141 aa26.58■■□□□ 1.85
CCDC12-207ENST00000494655 ALDH1B1P30837 517 aa26.58■■□□□ 1.85
CCDC12-207ENST00000494655 NEXNQ0ZGT2 675 aa26.58■■□□□ 1.85
CCDC12-207ENST00000494655 ISCA1Q9BUE6 129 aa26.58■■□□□ 1.85
CCDC12-207ENST00000494655 LAMB2P55268 1798 aa26.58■■□□□ 1.85
CCDC12-207ENST00000494655 CRY2Q49AN0 593 aa26.57■■□□□ 1.84
CCDC12-207ENST00000494655 MYD88Q99836 296 aa26.57■■□□□ 1.84
CCDC12-207ENST00000494655 SLX4Q8IY92 1834 aa26.57■■□□□ 1.84
CCDC12-207ENST00000494655 KSR2Q6VAB6 950 aa26.56■■□□□ 1.84
CCDC12-207ENST00000494655 ZNF219Q9P2Y4 722 aaPredicted RBP26.56■■□□□ 1.84
CCDC12-207ENST00000494655 MAP3K2Q9Y2U5 619 aa26.56■■□□□ 1.84
CCDC12-207ENST00000494655 C21orf2O43822 256 aa26.55■■□□□ 1.84
CCDC12-207ENST00000494655 HSP90B1P14625 803 aaKnown RBP26.55■■□□□ 1.84
CCDC12-207ENST00000494655 FLIIQ13045 1269 aa26.55■■□□□ 1.84
CCDC12-207ENST00000494655 FKBP5Q13451 457 aaPredicted RBP26.55■■□□□ 1.84
CCDC12-207ENST00000494655 RBM17Q96I25 401 aaKnown RBP26.55■■□□□ 1.84
CCDC12-207ENST00000494655 DDX60Q8IY21 1712 aaKnown RBP26.54■■□□□ 1.84
CCDC12-207ENST00000494655 TRIM28Q13263 835 aaKnown RBP26.54■■□□□ 1.84
CCDC12-207ENST00000494655 SLC10A5Q5PT55 438 aa26.54■■□□□ 1.84
CCDC12-207ENST00000494655 METTL22Q9BUU2 404 aaPredicted RBP26.54■■□□□ 1.84
CCDC12-207ENST00000494655 PI4KAP2A4QPH2 592 aa26.53■■□□□ 1.84
CCDC12-207ENST00000494655 PI4KAP1Q8N8J0 262 aa26.53■■□□□ 1.84
CCDC12-207ENST00000494655 ZNF784Q8NCA9 323 aaPredicted RBP26.53■■□□□ 1.84
CCDC12-207ENST00000494655 CCDC191Q8NCU4 936 aa26.53■■□□□ 1.84
CCDC12-207ENST00000494655 CWC25Q9NXE8 425 aaPredicted RBP26.53■■□□□ 1.84
CCDC12-207ENST00000494655 ADCY9O60503 1353 aa26.53■■□□□ 1.84
CCDC12-207ENST00000494655 FER1L6Q2WGJ9 1857 aa26.53■■□□□ 1.84
CCDC12-207ENST00000494655 SLFN5Q08AF3 891 aa26.52■■□□□ 1.84
CCDC12-207ENST00000494655 SBF1O95248 1867 aa26.51■■□□□ 1.83
CCDC12-207ENST00000494655 CCDC93Q567U6 631 aa26.51■■□□□ 1.83
CCDC12-207ENST00000494655 TMX4Q9H1E5 349 aaPredicted RBP26.51■■□□□ 1.83
CCDC12-207ENST00000494655 RNF181Q9P0P0 153 aa26.51■■□□□ 1.83
CCDC12-207ENST00000494655 HCLS1P14317 486 aaPredicted RBP26.5■■□□□ 1.83
CCDC12-207ENST00000494655 HOXA10P31260 410 aaPredicted RBP26.5■■□□□ 1.83
CCDC12-207ENST00000494655 C9orf131Q5VYM1 1079 aa26.5■■□□□ 1.83
CCDC12-207ENST00000494655 G2E3Q7L622 706 aa26.5■■□□□ 1.83
CCDC12-207ENST00000494655 TIAM2Q8IVF5 1701 aa26.5■■□□□ 1.83
CCDC12-207ENST00000494655 RASSF7Q02833 373 aa26.49■■□□□ 1.83
CCDC12-207ENST00000494655 ZBTB38Q8NAP3 1195 aaPredicted RBP26.49■■□□□ 1.83
CCDC12-207ENST00000494655 ZNF428Q96B54 188 aa26.49■■□□□ 1.83
CCDC12-207ENST00000494655 FAM89AQ96GI7 184 aa26.49■■□□□ 1.83
CCDC12-207ENST00000494655 CRAMP1Q96RY5 1269 aa26.49■■□□□ 1.83
CCDC12-207ENST00000494655 TAOK3Q9H2K8 898 aa26.49■■□□□ 1.83
CCDC12-207ENST00000494655 LMNB1P20700 586 aa26.48■■□□□ 1.83
CCDC12-207ENST00000494655 CCDC88AQ3V6T2 1871 aa26.47■■□□□ 1.83
CCDC12-207ENST00000494655 HNRNPUQ00839 825 aaKnown RBP eCLIP26.47■■□□□ 1.833e-6■□□□□ 9.8
CCDC12-207ENST00000494655 RTL5Q5HYW3 569 aaPredicted RBP26.47■■□□□ 1.83
CCDC12-207ENST00000494655 DDX46Q7L014 1031 aaKnown RBP26.47■■□□□ 1.83
CCDC12-207ENST00000494655 DNAAF4Q8WXU2 420 aa26.47■■□□□ 1.83
CCDC12-207ENST00000494655 LTBP3Q9NS15 1303 aa26.46■■□□□ 1.83
CCDC12-207ENST00000494655 IRS4O14654 1257 aaPredicted RBP26.46■■□□□ 1.83
CCDC12-207ENST00000494655 PPEF1O14829 653 aaPredicted RBP26.46■■□□□ 1.83
CCDC12-207ENST00000494655 CC2D2BQ6DHV5 1058 aa26.46■■□□□ 1.83
CCDC12-207ENST00000494655 C3orf67Q6ZVT6 689 aa26.46■■□□□ 1.83
CCDC12-207ENST00000494655 RTKN2Q8IZC4 609 aa26.46■■□□□ 1.83
CCDC12-207ENST00000494655 CDCA7LQ96GN5 454 aa26.46■■□□□ 1.83
CCDC12-207ENST00000494655 ZC3H4Q9UPT8 1303 aaKnown RBP26.45■■□□□ 1.83
CCDC12-207ENST00000494655 NFKBIEO00221 500 aa26.45■■□□□ 1.82
CCDC12-207ENST00000494655 PCCAP05165 728 aaPredicted RBP26.45■■□□□ 1.82
CCDC12-207ENST00000494655 SYNE4Q8N205 404 aa26.45■■□□□ 1.82
CCDC12-207ENST00000494655 GRIPAP1Q4V328 841 aa26.44■■□□□ 1.82
CCDC12-207ENST00000494655 GPBP1L1Q9HC44 474 aaPredicted RBP26.44■■□□□ 1.82
CCDC12-207ENST00000494655 ABCC4O15439 1325 aa26.43■■□□□ 1.82
CCDC12-207ENST00000494655 CT47B1P0C2W7 299 aaPredicted RBP26.43■■□□□ 1.82
CCDC12-207ENST00000494655 DICER1Q9UPY3 1922 aaKnown RBP26.43■■□□□ 1.82
CCDC12-207ENST00000494655 MYH3P11055 1940 aa26.42■■□□□ 1.82
CCDC12-207ENST00000494655 NEURL1BA8MQ27 555 aa26.42■■□□□ 1.82
CCDC12-207ENST00000494655 LINS1Q8NG48 757 aa26.42■■□□□ 1.82
CCDC12-207ENST00000494655 ZNF526Q8TF50 670 aaPredicted RBP26.42■■□□□ 1.82
CCDC12-207ENST00000494655 C7orf43Q8WVR3 580 aa26.42■■□□□ 1.82
CCDC12-207ENST00000494655 IGKV5-2P06315 115 aa26.41■■□□□ 1.82
CCDC12-207ENST00000494655 CWF19L2Q2TBE0 894 aaKnown RBP26.41■■□□□ 1.82
CCDC12-207ENST00000494655 CDHR2Q9BYE9 1310 aa26.4■■□□□ 1.82
CCDC12-207ENST00000494655 FKBP4Q02790 459 aaKnown RBP eCLIP26.4■■□□□ 1.82
CCDC12-207ENST00000494655 GRAPQ13588 217 aa26.4■■□□□ 1.82
CCDC12-207ENST00000494655 TMC4Q7Z404 712 aa26.4■■□□□ 1.82
CCDC12-207ENST00000494655 TRMT2AQ8IZ69 625 aaKnown RBP26.4■■□□□ 1.82
CCDC12-207ENST00000494655 GRAPLQ8TC17 118 aaPredicted RBP26.4■■□□□ 1.82
CCDC12-207ENST00000494655 PDE8AO60658 829 aa26.39■■□□□ 1.82
CCDC12-207ENST00000494655 BBOX1O75936 387 aa26.39■■□□□ 1.82
CCDC12-207ENST00000494655 SF3B3Q15393 1217 aaKnown RBP26.39■■□□□ 1.82
CCDC12-207ENST00000494655 ALDH1L2Q3SY69 923 aa26.39■■□□□ 1.82
CCDC12-207ENST00000494655 KDM2BQ8NHM5 1336 aa26.39■■□□□ 1.81
CCDC12-207ENST00000494655 CCDC152Q4G0S7 254 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms