RNA–Protein interactions for RNA: ENST00000494586.5

CCSER2-208, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2

Gene CCSER2, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-208ENST00000494586 RPAP2Q8IXW5 612 aaPredicted RBP11.46□□□□□ -0.57
CCSER2-208ENST00000494586 NIP7Q9Y221 180 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCSER2-208ENST00000494586 NUP188Q5SRE5 1749 aa11.46□□□□□ -0.58
CCSER2-208ENST00000494586 UBN2Q6ZU65 1347 aa11.45□□□□□ -0.58
CCSER2-208ENST00000494586 GNAI2P04899 355 aa11.45□□□□□ -0.58
CCSER2-208ENST00000494586 NBPF7P0C2Y1 421 aaPredicted RBP11.45□□□□□ -0.58
CCSER2-208ENST00000494586 UBTFL1P0CB47 393 aaPredicted RBP11.45□□□□□ -0.58
CCSER2-208ENST00000494586 MTX1Q13505 466 aa11.45□□□□□ -0.58
CCSER2-208ENST00000494586 SUSD4Q5VX71 490 aa11.45□□□□□ -0.58
CCSER2-208ENST00000494586 TBC1D9BQ66K14 1250 aa11.45□□□□□ -0.58
CCSER2-208ENST00000494586 TPTE2Q6XPS3 522 aa11.45□□□□□ -0.58
CCSER2-208ENST00000494586 MEIS3Q99687 375 aa11.45□□□□□ -0.58
CCSER2-208ENST00000494586 UTP14AQ9BVJ6 771 aaKnown RBP11.45□□□□□ -0.58
CCSER2-208ENST00000494586 NYXQ9GZU5 481 aa11.45□□□□□ -0.58
CCSER2-208ENST00000494586 SRP68Q9UHB9 627 aaKnown RBP11.45□□□□□ -0.58
CCSER2-208ENST00000494586 QSER1Q2KHR3 1735 aa11.45□□□□□ -0.58
CCSER2-208ENST00000494586 SH3TC1Q8TE82 1336 aa11.44□□□□□ -0.58
CCSER2-208ENST00000494586 NFIXQ14938 502 aa11.44□□□□□ -0.58
CCSER2-208ENST00000494586 SMIM5Q71RC9 77 aa11.44□□□□□ -0.58
CCSER2-208ENST00000494586 N4BP2Q86UW6 1770 aaPredicted RBP11.44□□□□□ -0.58
CCSER2-208ENST00000494586 ARFGEF2Q9Y6D5 1785 aa11.44□□□□□ -0.58
CCSER2-208ENST00000494586 NTSR2O95665 410 aa11.43□□□□□ -0.58
CCSER2-208ENST00000494586 CSF1RP07333 972 aa11.43□□□□□ -0.58
CCSER2-208ENST00000494586 ATP8B2P98198 1209 aa11.43□□□□□ -0.58
CCSER2-208ENST00000494586 HDAC1Q13547 482 aaPredicted RBP11.43□□□□□ -0.58
CCSER2-208ENST00000494586 RABL6Q3YEC7 729 aaPredicted RBP11.43□□□□□ -0.58
CCSER2-208ENST00000494586 KAZALD1Q96I82 304 aa11.43□□□□□ -0.58
CCSER2-208ENST00000494586 PPP4R2Q9NY27 417 aa11.43□□□□□ -0.58
CCSER2-208ENST00000494586 TRMT112Q9UI30 125 aaKnown RBP11.43□□□□□ -0.58
CCSER2-208ENST00000494586 CARMIL3Q8ND23 1372 aa11.42□□□□□ -0.58
CCSER2-208ENST00000494586 NUP98P52948 1817 aa11.42□□□□□ -0.58
CCSER2-208ENST00000494586 BCORQ6W2J9 1755 aa11.42□□□□□ -0.58
CCSER2-208ENST00000494586 GPTP24298 496 aa11.42□□□□□ -0.58
CCSER2-208ENST00000494586 IRX6P78412 446 aaPredicted RBP11.42□□□□□ -0.58
CCSER2-208ENST00000494586 ANKRD44Q8N8A2 993 aa11.42□□□□□ -0.58
CCSER2-208ENST00000494586 SCN7AQ01118 1682 aa11.42□□□□□ -0.58
CCSER2-208ENST00000494586 POLRMTO00411 1230 aaKnown RBP11.41□□□□□ -0.58
CCSER2-208ENST00000494586 PDE8AO60658 829 aa11.41□□□□□ -0.58
CCSER2-208ENST00000494586 FOXO4P98177 505 aa11.41□□□□□ -0.58
CCSER2-208ENST00000494586 UBE3BQ7Z3V4 1068 aa11.41□□□□□ -0.58
CCSER2-208ENST00000494586 FAM89AQ96GI7 184 aa11.41□□□□□ -0.58
CCSER2-208ENST00000494586 PCDHB15Q9Y5E8 787 aa11.41□□□□□ -0.58
CCSER2-208ENST00000494586 RIC1Q4ADV7 1423 aa11.41□□□□□ -0.58
CCSER2-208ENST00000494586 C4AP0C0L4 1744 aa11.4□□□□□ -0.58
CCSER2-208ENST00000494586 KLRG2A4D1S0 409 aaPredicted RBP11.4□□□□□ -0.58
CCSER2-208ENST00000494586 IRS4O14654 1257 aaPredicted RBP11.4□□□□□ -0.58
CCSER2-208ENST00000494586 MSH5O43196 834 aa11.4□□□□□ -0.58
CCSER2-208ENST00000494586 SERPINB2P05120 415 aa11.4□□□□□ -0.58
CCSER2-208ENST00000494586 POLA2Q14181 598 aa11.4□□□□□ -0.58
CCSER2-208ENST00000494586 SF3B3Q15393 1217 aaKnown RBP11.4□□□□□ -0.58
CCSER2-208ENST00000494586 CEP85Q6P2H3 762 aa11.4□□□□□ -0.58
CCSER2-208ENST00000494586 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.58
CCSER2-208ENST00000494586 SSH3Q8TE77 659 aa11.4□□□□□ -0.58
CCSER2-208ENST00000494586 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
CCSER2-208ENST00000494586 RWDD1Q9H446 243 aaPredicted RBP11.4□□□□□ -0.58
CCSER2-208ENST00000494586 LRRFIP2Q9Y608 721 aaKnown RBP11.4□□□□□ -0.58
CCSER2-208ENST00000494586 HMMRO75330 724 aa11.39□□□□□ -0.59
CCSER2-208ENST00000494586 SIRT2Q8IXJ6 389 aa11.39□□□□□ -0.59
CCSER2-208ENST00000494586 MTFR1LQ9H019 292 aa11.39□□□□□ -0.59
CCSER2-208ENST00000494586 FBXO3Q9UK99 471 aa11.39□□□□□ -0.59
CCSER2-208ENST00000494586 PDZRN3Q9UPQ7 1066 aa11.39□□□□□ -0.59
CCSER2-208ENST00000494586 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
CCSER2-208ENST00000494586 PARP3Q9Y6F1 533 aa11.39□□□□□ -0.59
CCSER2-208ENST00000494586 RTL9Q8NET4 1388 aa11.39□□□□□ -0.59
CCSER2-208ENST00000494586 ANKRD36CQ5JPF3 1778 aa11.39□□□□□ -0.59
CCSER2-208ENST00000494586 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
CCSER2-208ENST00000494586 DDR1Q08345 913 aa11.38□□□□□ -0.59
CCSER2-208ENST00000494586 EPHA10Q5JZY3 1008 aa11.38□□□□□ -0.59
CCSER2-208ENST00000494586 BICDL1Q6ZP65 573 aa11.38□□□□□ -0.59
CCSER2-208ENST00000494586 CNBD1Q8NA66 436 aa11.38□□□□□ -0.59
CCSER2-208ENST00000494586 TTLL11Q8NHH1 800 aa11.38□□□□□ -0.59
CCSER2-208ENST00000494586 NLRP3Q96P20 1036 aa11.38□□□□□ -0.59
CCSER2-208ENST00000494586 BRIP1Q9BX63 1249 aa11.38□□□□□ -0.59
CCSER2-208ENST00000494586 BICC1Q9H694 974 aaKnown RBP11.38□□□□□ -0.59
CCSER2-208ENST00000494586 NOP58Q9Y2X3 529 aaKnown RBP11.38□□□□□ -0.59
CCSER2-208ENST00000494586 SOCS7O14512 581 aa11.37□□□□□ -0.59
CCSER2-208ENST00000494586 MMP10P09238 476 aa11.37□□□□□ -0.59
CCSER2-208ENST00000494586 CTSWP56202 376 aa11.37□□□□□ -0.59
CCSER2-208ENST00000494586 ST5P78524 1137 aa11.37□□□□□ -0.59
CCSER2-208ENST00000494586 CRY2Q49AN0 593 aa11.37□□□□□ -0.59
CCSER2-208ENST00000494586 ERFEQ4G0M1 354 aa11.37□□□□□ -0.59
CCSER2-208ENST00000494586 PRR5LQ6MZQ0 368 aa11.37□□□□□ -0.59
CCSER2-208ENST00000494586 GCC1Q96CN9 775 aa11.37□□□□□ -0.59
CCSER2-208ENST00000494586 DCTPP1Q9H773 170 aa11.37□□□□□ -0.59
CCSER2-208ENST00000494586 COPRSQ9NQ92 184 aa11.37□□□□□ -0.59
CCSER2-208ENST00000494586 TUBGCP6Q96RT7 1819 aa11.37□□□□□ -0.59
CCSER2-208ENST00000494586 COL24A1Q17RW2 1714 aa11.36□□□□□ -0.59
CCSER2-208ENST00000494586 SRGAP3O43295 1099 aa11.36□□□□□ -0.59
CCSER2-208ENST00000494586 RFX5P48382 616 aaPredicted RBP11.36□□□□□ -0.59
CCSER2-208ENST00000494586 R3HDM1Q15032 1099 aaKnown RBP11.36□□□□□ -0.59
CCSER2-208ENST00000494586 CCDC152Q4G0S7 254 aa11.36□□□□□ -0.59
CCSER2-208ENST00000494586 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
CCSER2-208ENST00000494586 LMBR1LQ6UX01 489 aa11.36□□□□□ -0.59
CCSER2-208ENST00000494586 NUTM1Q86Y26 1132 aa11.36□□□□□ -0.59
CCSER2-208ENST00000494586 SMC5Q8IY18 1101 aa11.36□□□□□ -0.59
CCSER2-208ENST00000494586 SYNE4Q8N205 404 aa11.36□□□□□ -0.59
CCSER2-208ENST00000494586 CCDC136Q96JN2 1154 aa11.36□□□□□ -0.59
CCSER2-208ENST00000494586 PDGFDQ9GZP0 370 aaPredicted RBP11.36□□□□□ -0.59
CCSER2-208ENST00000494586 PNMA6EA0A0J9YXQ4 647 aa11.35□□□□□ -0.59
CCSER2-208ENST00000494586 IGHDP01880 384 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms