RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 NLRP10Q86W26 655 aa25.65■■□□□ 1.7
KPNA1-210ENST00000494339 APBB1O00213 710 aa25.65■■□□□ 1.7
KPNA1-210ENST00000494339 PLSCR1O15162 318 aa25.65■■□□□ 1.7
KPNA1-210ENST00000494339 LNPKQ9C0E8 428 aa25.65■■□□□ 1.7
KPNA1-210ENST00000494339 MTX1Q13505 466 aa25.64■■□□□ 1.69
KPNA1-210ENST00000494339 POLA2Q14181 598 aa25.64■■□□□ 1.69
KPNA1-210ENST00000494339 ZNF34Q8IZ26 560 aa25.64■■□□□ 1.69
KPNA1-210ENST00000494339 EXOC6BQ9Y2D4 811 aa25.64■■□□□ 1.69
KPNA1-210ENST00000494339 PHF14O94880 888 aa25.63■■□□□ 1.69
KPNA1-210ENST00000494339 ILDR2Q71H61 639 aa25.63■■□□□ 1.69
KPNA1-210ENST00000494339 CHD1LQ86WJ1 897 aa25.63■■□□□ 1.69
KPNA1-210ENST00000494339 UBN2Q6ZU65 1347 aa25.63■■□□□ 1.69
KPNA1-210ENST00000494339 FAM89AQ96GI7 184 aa25.63■■□□□ 1.69
KPNA1-210ENST00000494339 BCL11AQ9H165 835 aa25.62■■□□□ 1.69
KPNA1-210ENST00000494339 ZNF652Q9Y2D9 606 aa25.62■■□□□ 1.69
KPNA1-210ENST00000494339 ZBTB38Q8NAP3 1195 aaPredicted RBP25.61■■□□□ 1.69
KPNA1-210ENST00000494339 PCCAP05165 728 aaPredicted RBP25.61■■□□□ 1.69
KPNA1-210ENST00000494339 ARHGEF1Q92888 912 aaKnown RBP25.61■■□□□ 1.69
KPNA1-210ENST00000494339 SRP68Q9UHB9 627 aaKnown RBP25.61■■□□□ 1.69
KPNA1-210ENST00000494339 SCN7AQ01118 1682 aa25.6■■□□□ 1.69
KPNA1-210ENST00000494339 NARFQ9UHQ1 456 aa25.6■■□□□ 1.69
KPNA1-210ENST00000494339 UBR3Q6ZT12 1888 aa25.6■■□□□ 1.69
KPNA1-210ENST00000494339 PDE4AP27815 886 aa25.59■■□□□ 1.69
KPNA1-210ENST00000494339 TRAPPC3LQ5T215 181 aa25.59■■□□□ 1.69
KPNA1-210ENST00000494339 USPL1Q5W0Q7 1092 aa25.59■■□□□ 1.69
KPNA1-210ENST00000494339 TRMT112Q9UI30 125 aaKnown RBP25.59■■□□□ 1.69
KPNA1-210ENST00000494339 NIP7Q9Y221 180 aaKnown RBP eCLIP25.59■■□□□ 1.69
KPNA1-210ENST00000494339 C4AP0C0L4 1744 aa25.59■■□□□ 1.69
KPNA1-210ENST00000494339 ZPR1O75312 459 aa25.59■■□□□ 1.69
KPNA1-210ENST00000494339 SURF6O75683 361 aaKnown RBP25.59■■□□□ 1.69
KPNA1-210ENST00000494339 CLEC4GQ6UXB4 293 aa25.59■■□□□ 1.69
KPNA1-210ENST00000494339 SYNE4Q8N205 404 aa25.59■■□□□ 1.69
KPNA1-210ENST00000494339 FAM177BA6PVY3 158 aa25.58■■□□□ 1.69
KPNA1-210ENST00000494339 FOXO4P98177 505 aa25.58■■□□□ 1.69
KPNA1-210ENST00000494339 RABL6Q3YEC7 729 aaPredicted RBP25.58■■□□□ 1.69
KPNA1-210ENST00000494339 ZBTB47Q9UFB7 747 aaPredicted RBP25.58■■□□□ 1.69
KPNA1-210ENST00000494339 SMARCA5O60264 1052 aaPredicted RBP25.57■■□□□ 1.68
KPNA1-210ENST00000494339 LMBR1LQ6UX01 489 aa25.57■■□□□ 1.68
KPNA1-210ENST00000494339 RFC4P35249 363 aa25.57■■□□□ 1.68
KPNA1-210ENST00000494339 SUSD4Q5VX71 490 aa25.57■■□□□ 1.68
KPNA1-210ENST00000494339 BCL2L12Q9HB09 334 aa25.57■■□□□ 1.68
KPNA1-210ENST00000494339 PA2G4Q9UQ80 394 aaKnown RBP25.57■■□□□ 1.68
KPNA1-210ENST00000494339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.56■■□□□ 1.68
KPNA1-210ENST00000494339 CHMP3Q9Y3E7 222 aa25.56■■□□□ 1.68
KPNA1-210ENST00000494339 PARP10Q53GL7 1025 aa25.55■■□□□ 1.68
KPNA1-210ENST00000494339 BICDL1Q6ZP65 573 aa25.55■■□□□ 1.68
KPNA1-210ENST00000494339 ADRA2BP18089 450 aa25.54■■□□□ 1.68
KPNA1-210ENST00000494339 UTP14AQ9BVJ6 771 aaKnown RBP25.54■■□□□ 1.68
KPNA1-210ENST00000494339 CDHR2Q9BYE9 1310 aa25.54■■□□□ 1.68
KPNA1-210ENST00000494339 USP42Q9H9J4 1324 aaKnown RBP25.54■■□□□ 1.68
KPNA1-210ENST00000494339 HMGB2P26583 209 aaKnown RBP25.53■■□□□ 1.68
KPNA1-210ENST00000494339 TBC1D9BQ66K14 1250 aa25.53■■□□□ 1.68
KPNA1-210ENST00000494339 KLHDC4Q8TBB5 520 aa25.53■■□□□ 1.68
KPNA1-210ENST00000494339 LRRCC1Q9C099 1032 aa25.53■■□□□ 1.68
KPNA1-210ENST00000494339 RBM19Q9Y4C8 960 aaKnown RBP25.53■■□□□ 1.68
KPNA1-210ENST00000494339 RGPD3A6NKT7 1758 aaPredicted RBP25.53■■□□□ 1.68
KPNA1-210ENST00000494339 RGPD4Q7Z3J3 1758 aa25.53■■□□□ 1.68
KPNA1-210ENST00000494339 RGL2O15211 777 aa25.53■■□□□ 1.68
KPNA1-210ENST00000494339 IRS4O14654 1257 aaPredicted RBP25.52■■□□□ 1.68
KPNA1-210ENST00000494339 PLA2G12BQ9BX93 195 aa25.52■■□□□ 1.68
KPNA1-210ENST00000494339 NOP58Q9Y2X3 529 aaKnown RBP25.52■■□□□ 1.68
KPNA1-210ENST00000494339 SSFA2P28290 1259 aa25.51■■□□□ 1.67
KPNA1-210ENST00000494339 OS9Q13438 667 aaPredicted RBP25.51■■□□□ 1.67
KPNA1-210ENST00000494339 ZNF827Q17R98 1081 aa25.51■■□□□ 1.67
KPNA1-210ENST00000494339 C16orf71Q8IYS4 520 aaPredicted RBP25.51■■□□□ 1.67
KPNA1-210ENST00000494339 SH3TC1Q8TE82 1336 aa25.51■■□□□ 1.67
KPNA1-210ENST00000494339 RAB11FIP3O75154 756 aa25.51■■□□□ 1.67
KPNA1-210ENST00000494339 EN1Q05925 392 aaPredicted RBP25.51■■□□□ 1.67
KPNA1-210ENST00000494339 SIL1Q9H173 461 aa25.51■■□□□ 1.67
KPNA1-210ENST00000494339 MYH3P11055 1940 aa25.5■■□□□ 1.67
KPNA1-210ENST00000494339 NTSR2O95665 410 aa25.5■■□□□ 1.67
KPNA1-210ENST00000494339 RFX5P48382 616 aaPredicted RBP25.5■■□□□ 1.67
KPNA1-210ENST00000494339 HSP90AB4PQ58FF6 505 aa25.5■■□□□ 1.67
KPNA1-210ENST00000494339 TFCP2L1Q9NZI6 479 aa25.5■■□□□ 1.67
KPNA1-210ENST00000494339 NUTM1Q86Y26 1132 aa25.49■■□□□ 1.67
KPNA1-210ENST00000494339 CCDC85AQ96PX6 553 aaPredicted RBP25.49■■□□□ 1.67
KPNA1-210ENST00000494339 EZH2Q15910 746 aaKnown RBP25.49■■□□□ 1.67
KPNA1-210ENST00000494339 RHPN1Q8TCX5 695 aa25.49■■□□□ 1.67
KPNA1-210ENST00000494339 AKT1S1Q96B36 256 aa25.49■■□□□ 1.67
KPNA1-210ENST00000494339 PTPN12Q05209 780 aaKnown RBP25.48■■□□□ 1.67
KPNA1-210ENST00000494339 OTUD7AQ8TE49 926 aaPredicted RBP25.48■■□□□ 1.67
KPNA1-210ENST00000494339 SETDB2Q96T68 719 aa25.48■■□□□ 1.67
KPNA1-210ENST00000494339 IL1RAPL2Q9NP60 686 aa25.48■■□□□ 1.67
KPNA1-210ENST00000494339 HCLS1P14317 486 aaPredicted RBP25.47■■□□□ 1.67
KPNA1-210ENST00000494339 G3BP1Q13283 466 aaKnown RBP eCLIP25.47■■□□□ 1.67
KPNA1-210ENST00000494339 KIF1BPQ96EK5 621 aa25.47■■□□□ 1.67
KPNA1-210ENST00000494339 CAMKK2Q96RR4 588 aa25.47■■□□□ 1.67
KPNA1-210ENST00000494339 COPRSQ9NQ92 184 aa25.47■■□□□ 1.67
KPNA1-210ENST00000494339 PDE8AO60658 829 aa25.47■■□□□ 1.67
KPNA1-210ENST00000494339 CTSWP56202 376 aa25.47■■□□□ 1.67
KPNA1-210ENST00000494339 SF3B2Q13435 895 aaKnown RBP25.47■■□□□ 1.67
KPNA1-210ENST00000494339 FAM161AQ3B820 660 aa25.47■■□□□ 1.67
KPNA1-210ENST00000494339 TUBGCP6Q96RT7 1819 aa25.45■■□□□ 1.67
KPNA1-210ENST00000494339 CSF1RP07333 972 aa25.45■■□□□ 1.67
KPNA1-210ENST00000494339 TTLL11Q8NHH1 800 aa25.45■■□□□ 1.67
KPNA1-210ENST00000494339 PLEKHM2Q8IWE5 1019 aa25.45■■□□□ 1.66
KPNA1-210ENST00000494339 DDX60Q8IY21 1712 aaKnown RBP25.45■■□□□ 1.66
KPNA1-210ENST00000494339 COL24A1Q17RW2 1714 aa25.44■■□□□ 1.66
KPNA1-210ENST00000494339 CCDC57Q2TAC2 916 aa25.44■■□□□ 1.66
KPNA1-210ENST00000494339 ERC1Q8IUD2 1116 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 207.8 ms