RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 MAP9Q49MG5 647 aa22.1■■□□□ 1.13
COL27A1-207ENST00000494090 ESYT1Q9BSJ8 1104 aa22.1■■□□□ 1.13
COL27A1-207ENST00000494090 IARSP41252 1262 aaKnown RBP22.1■■□□□ 1.13
COL27A1-207ENST00000494090 AMPD3Q01432 767 aa22.1■■□□□ 1.13
COL27A1-207ENST00000494090 PDE4BQ07343 736 aa22.1■■□□□ 1.13
COL27A1-207ENST00000494090 C16orf45Q96MC5 204 aaPredicted RBP22.1■■□□□ 1.13
COL27A1-207ENST00000494090 ADAMTS2O95450 1211 aa22.09■■□□□ 1.13
COL27A1-207ENST00000494090 CCDC82Q8N4S0 544 aa22.09■■□□□ 1.13
COL27A1-207ENST00000494090 UQCRFS1P1P0C7P4 283 aa22.09■■□□□ 1.13
COL27A1-207ENST00000494090 CETN1Q12798 172 aa22.09■■□□□ 1.13
COL27A1-207ENST00000494090 DDX46Q7L014 1031 aaKnown RBP22.09■■□□□ 1.13
COL27A1-207ENST00000494090 ORC3Q9UBD5 711 aaPredicted RBP22.09■■□□□ 1.13
COL27A1-207ENST00000494090 EIF2AK4Q9P2K8 1649 aaKnown RBP22.09■■□□□ 1.13
COL27A1-207ENST00000494090 TTC21AQ8NDW8 1320 aa22.09■■□□□ 1.13
COL27A1-207ENST00000494090 PUS7Q96PZ0 661 aaKnown RBP22.09■■□□□ 1.13
COL27A1-207ENST00000494090 TAF3Q5VWG9 929 aa22.08■■□□□ 1.13
COL27A1-207ENST00000494090 NCOA7Q8NI08 942 aa22.08■■□□□ 1.13
COL27A1-207ENST00000494090 ATP8B2P98198 1209 aa22.08■■□□□ 1.13
COL27A1-207ENST00000494090 LDHAL6AQ6ZMR3 332 aa22.08■■□□□ 1.13
COL27A1-207ENST00000494090 STXBP4Q6ZWJ1 553 aa22.08■■□□□ 1.13
COL27A1-207ENST00000494090 UBE3BQ7Z3V4 1068 aa22.08■■□□□ 1.12
COL27A1-207ENST00000494090 TMC6Q7Z403 805 aa22.08■■□□□ 1.12
COL27A1-207ENST00000494090 ZBTB3Q9H5J0 574 aa22.08■■□□□ 1.12
COL27A1-207ENST00000494090 TRMT1Q9NXH9 659 aaKnown RBP22.08■■□□□ 1.12
COL27A1-207ENST00000494090 TCOF1Q13428 1488 aaKnown RBP22.08■■□□□ 1.12
COL27A1-207ENST00000494090 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.12
COL27A1-207ENST00000494090 SNRPA1P09661 255 aaKnown RBP22.08■■□□□ 1.12
COL27A1-207ENST00000494090 YEATS4O95619 227 aa22.07■■□□□ 1.12
COL27A1-207ENST00000494090 PIK3C2GO75747 1445 aa22.07■■□□□ 1.12
COL27A1-207ENST00000494090 USO1O60763 962 aaKnown RBP22.07■■□□□ 1.12
COL27A1-207ENST00000494090 HLA-DOAP06340 250 aa22.07■■□□□ 1.12
COL27A1-207ENST00000494090 TCP11L1Q9NUJ3 509 aa22.07■■□□□ 1.12
COL27A1-207ENST00000494090 C6orf229H3BNL8 230 aa22.07■■□□□ 1.12
COL27A1-207ENST00000494090 NUP88Q99567 741 aaPredicted RBP22.07■■□□□ 1.12
COL27A1-207ENST00000494090 LRRC27Q9C0I9 530 aa22.07■■□□□ 1.12
COL27A1-207ENST00000494090 CABP5Q9NP86 173 aa22.07■■□□□ 1.12
COL27A1-207ENST00000494090 PLCH2O75038 1416 aa22.07■■□□□ 1.12
COL27A1-207ENST00000494090 ERICH4A6NGS2 130 aa22.06■■□□□ 1.12
COL27A1-207ENST00000494090 TMEM67Q5HYA8 995 aa22.06■■□□□ 1.12
COL27A1-207ENST00000494090 PPP4R3BQ5MIZ7 849 aa22.06■■□□□ 1.12
COL27A1-207ENST00000494090 CALML4Q96GE6 196 aa22.06■■□□□ 1.12
COL27A1-207ENST00000494090 GOLGA6L9A6NEM1 432 aa22.06■■□□□ 1.12
COL27A1-207ENST00000494090 CBX1P83916 185 aa22.06■■□□□ 1.12
COL27A1-207ENST00000494090 TRAF1Q13077 416 aa22.06■■□□□ 1.12
COL27A1-207ENST00000494090 KANK3Q6NY19 840 aa22.06■■□□□ 1.12
COL27A1-207ENST00000494090 GSTO1P78417 241 aa22.06■■□□□ 1.12
COL27A1-207ENST00000494090 C8orf58Q8NAV2 365 aa22.06■■□□□ 1.12
COL27A1-207ENST00000494090 USP8P40818 1118 aa22.06■■□□□ 1.12
COL27A1-207ENST00000494090 BIN1O00499 593 aa22.05■■□□□ 1.12
COL27A1-207ENST00000494090 CCDC178Q5BJE1 867 aa22.05■■□□□ 1.12
COL27A1-207ENST00000494090 PRIMPOLQ96LW4 560 aa22.05■■□□□ 1.12
COL27A1-207ENST00000494090 CCDC91Q7Z6B0 441 aa22.05■■□□□ 1.12
COL27A1-207ENST00000494090 HCLS1P14317 486 aaPredicted RBP22.05■■□□□ 1.12
COL27A1-207ENST00000494090 METAP2P50579 478 aaKnown RBP eCLIP22.05■■□□□ 1.12
COL27A1-207ENST00000494090 UBA5Q9GZZ9 404 aa22.05■■□□□ 1.12
COL27A1-207ENST00000494090 ATP5J2-PTCD1G3V325 749 aa22.05■■□□□ 1.12
COL27A1-207ENST00000494090 ALDH1L1O75891 902 aa22.05■■□□□ 1.12
COL27A1-207ENST00000494090 FBLN1P23142 703 aa22.04■■□□□ 1.12
COL27A1-207ENST00000494090 CCDC102BQ68D86 513 aa22.04■■□□□ 1.12
COL27A1-207ENST00000494090 ATP10BO94823 1461 aa22.04■■□□□ 1.12
COL27A1-207ENST00000494090 ANKRD13DQ6ZTN6 518 aa22.04■■□□□ 1.12
COL27A1-207ENST00000494090 TESK2Q96S53 571 aa22.04■■□□□ 1.12
COL27A1-207ENST00000494090 POTEB2H3BUK9 544 aa22.03■■□□□ 1.12
COL27A1-207ENST00000494090 GPTP24298 496 aa22.03■■□□□ 1.12
COL27A1-207ENST00000494090 GIMAP6Q6P9H5 292 aa22.03■■□□□ 1.12
COL27A1-207ENST00000494090 FAM114A1Q8IWE2 563 aa22.03■■□□□ 1.12
COL27A1-207ENST00000494090 ANKRD24Q8TF21 1146 aa22.03■■□□□ 1.12
COL27A1-207ENST00000494090 DYNC1I1O14576 645 aa22.03■■□□□ 1.12
COL27A1-207ENST00000494090 CPLX3Q8WVH0 158 aa22.03■■□□□ 1.12
COL27A1-207ENST00000494090 KAT14Q9H8E8 782 aa22.03■■□□□ 1.12
COL27A1-207ENST00000494090 SNRKQ9NRH2 765 aa22.03■■□□□ 1.12
COL27A1-207ENST00000494090 CHPF2Q9P2E5 772 aa22.03■■□□□ 1.12
COL27A1-207ENST00000494090 XRCC6P12956 609 aaKnown RBP eCLIP22.03■■□□□ 1.12
COL27A1-207ENST00000494090 ZFYP08048 801 aaPredicted RBP22.03■■□□□ 1.12
COL27A1-207ENST00000494090 SNW1Q13573 536 aaKnown RBP22.03■■□□□ 1.12
COL27A1-207ENST00000494090 PAXBP1Q9Y5B6 917 aa22.03■■□□□ 1.12
COL27A1-207ENST00000494090 USP48Q86UV5 1035 aa22.02■■□□□ 1.12
COL27A1-207ENST00000494090 BRF1Q92994 677 aa22.02■■□□□ 1.12
COL27A1-207ENST00000494090 FEZ1Q99689 392 aa22.02■■□□□ 1.12
COL27A1-207ENST00000494090 NUP153P49790 1475 aaKnown RBP22.02■■□□□ 1.12
COL27A1-207ENST00000494090 PAFAH1B1P43034 410 aa22.02■■□□□ 1.12
COL27A1-207ENST00000494090 MFSD6Q6ZSS7 791 aa22.02■■□□□ 1.12
COL27A1-207ENST00000494090 DCTPP1Q9H773 170 aa22.02■■□□□ 1.12
COL27A1-207ENST00000494090 PPIP5K1Q6PFW1 1433 aa22.02■■□□□ 1.12
COL27A1-207ENST00000494090 HAND2P61296 217 aa22.02■■□□□ 1.12
COL27A1-207ENST00000494090 MPHOSPH6Q99547 160 aaKnown RBP22.02■■□□□ 1.12
COL27A1-207ENST00000494090 RBM8AQ9Y5S9 174 aaKnown RBP22.02■■□□□ 1.12
COL27A1-207ENST00000494090 CCDC152Q4G0S7 254 aa22.02■■□□□ 1.11
COL27A1-207ENST00000494090 NECAB1Q8N987 351 aa22.02■■□□□ 1.11
COL27A1-207ENST00000494090 TTLL12Q14166 644 aaPredicted RBP22.01■■□□□ 1.11
COL27A1-207ENST00000494090 SMC5Q8IY18 1101 aa22.01■■□□□ 1.11
COL27A1-207ENST00000494090 CRNKL1Q9BZJ0 848 aaKnown RBP22.01■■□□□ 1.11
COL27A1-207ENST00000494090 CNPY2Q9Y2B0 182 aa22.01■■□□□ 1.11
COL27A1-207ENST00000494090 TSPY2A6NKD2 308 aa22.01■■□□□ 1.11
COL27A1-207ENST00000494090 MICU3Q86XE3 530 aa22.01■■□□□ 1.11
COL27A1-207ENST00000494090 ANXA1P04083 346 aa22■■□□□ 1.11
COL27A1-207ENST00000494090 CLCN1P35523 988 aa22■■□□□ 1.11
COL27A1-207ENST00000494090 ST5P78524 1137 aa22■■□□□ 1.11
COL27A1-207ENST00000494090 BMP15O95972 392 aa22■■□□□ 1.11
COL27A1-207ENST00000494090 ZGPATQ8N5A5 531 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms