RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 RAI14Q9P0K7 980 aa14.27□□□□□ -0.13
BRCA1-222ENST00000493919 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.13
BRCA1-222ENST00000493919 SOS1Q07889 1333 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-222ENST00000493919 RFC4P35249 363 aa14.26□□□□□ -0.13
BRCA1-222ENST00000493919 OTUD6BQ8N6M0 293 aa14.26□□□□□ -0.13
BRCA1-222ENST00000493919 ELL2O00472 640 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-222ENST00000493919 ADRA2BP18089 450 aa14.25□□□□□ -0.13
BRCA1-222ENST00000493919 SEMA3FQ13275 785 aa14.25□□□□□ -0.13
BRCA1-222ENST00000493919 ARHGEF1Q92888 912 aaKnown RBP14.25□□□□□ -0.13
BRCA1-222ENST00000493919 PPP4R2Q9NY27 417 aa14.25□□□□□ -0.13
BRCA1-222ENST00000493919 MTFR1LQ9H019 292 aa14.25□□□□□ -0.13
BRCA1-222ENST00000493919 ZNF521Q96K83 1311 aa14.24□□□□□ -0.13
BRCA1-222ENST00000493919 DUSP27Q5VZP5 1158 aa14.24□□□□□ -0.13
BRCA1-222ENST00000493919 SPON1Q9HCB6 807 aa14.24□□□□□ -0.13
BRCA1-222ENST00000493919 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-222ENST00000493919 MYL6BP14649 208 aa14.23□□□□□ -0.13
BRCA1-222ENST00000493919 ZSCAN20P17040 1043 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-222ENST00000493919 IL6STP40189 918 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-222ENST00000493919 HDGFL1Q5TGJ6 251 aa14.23□□□□□ -0.13
BRCA1-222ENST00000493919 SLC16A10Q8TF71 515 aa14.23□□□□□ -0.13
BRCA1-222ENST00000493919 SRP68Q9UHB9 627 aaKnown RBP14.23□□□□□ -0.13
BRCA1-222ENST00000493919 LRP5O75197 1615 aa14.23□□□□□ -0.13
BRCA1-222ENST00000493919 GOLGA2Q08379 1002 aa14.23□□□□□ -0.13
BRCA1-222ENST00000493919 C8orf58Q8NAV2 365 aa14.23□□□□□ -0.13
BRCA1-222ENST00000493919 MYH16Q9H6N6 1097 aa14.23□□□□□ -0.13
BRCA1-222ENST00000493919 BSDC1Q9NW68 430 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-222ENST00000493919 SCN7AQ01118 1682 aa14.22□□□□□ -0.13
BRCA1-222ENST00000493919 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
BRCA1-222ENST00000493919 EIF5P55010 431 aaKnown RBP14.22□□□□□ -0.13
BRCA1-222ENST00000493919 SATB1Q01826 763 aa14.22□□□□□ -0.13
BRCA1-222ENST00000493919 NBPF10Q6P3W6 841 aaKnown RBP14.22□□□□□ -0.13
BRCA1-222ENST00000493919 NBPF15Q8N660 670 aa14.22□□□□□ -0.13
BRCA1-222ENST00000493919 TSPYL1Q9H0U9 437 aa14.22□□□□□ -0.13
BRCA1-222ENST00000493919 USP42Q9H9J4 1324 aaKnown RBP14.22□□□□□ -0.13
BRCA1-222ENST00000493919 GOLGB1Q14789 3259 aaKnown RBP14.22□□□□□ -0.13
BRCA1-222ENST00000493919 ZPR1O75312 459 aa14.21□□□□□ -0.13
BRCA1-222ENST00000493919 ANXA1P04083 346 aa14.21□□□□□ -0.13
BRCA1-222ENST00000493919 SSR1P43307 286 aaKnown RBP14.21□□□□□ -0.13
BRCA1-222ENST00000493919 EXOC8Q8IYI6 725 aa14.21□□□□□ -0.13
BRCA1-222ENST00000493919 TBC1D2BQ9UPU7 963 aa14.21□□□□□ -0.13
BRCA1-222ENST00000493919 E9PSI1 815 aa14.21□□□□□ -0.14
BRCA1-222ENST00000493919 IRF6O14896 467 aa14.21□□□□□ -0.14
BRCA1-222ENST00000493919 HOXB7P09629 217 aa14.21□□□□□ -0.14
BRCA1-222ENST00000493919 MAP2K1Q02750 393 aaPredicted RBP14.21□□□□□ -0.14
BRCA1-222ENST00000493919 USPL1Q5W0Q7 1092 aa14.21□□□□□ -0.14
BRCA1-222ENST00000493919 TSPYL6Q8N831 410 aa14.21□□□□□ -0.14
BRCA1-222ENST00000493919 A0A087WZG4 1122 aa14.2□□□□□ -0.14
BRCA1-222ENST00000493919 POLD1P28340 1107 aa14.2□□□□□ -0.14
BRCA1-222ENST00000493919 EXOSC9Q06265 439 aaKnown RBP14.2□□□□□ -0.14
BRCA1-222ENST00000493919 TSHZ1Q6ZSZ6 1077 aa14.2□□□□□ -0.14
BRCA1-222ENST00000493919 DZIP3Q86Y13 1208 aaKnown RBP14.2□□□□□ -0.14
BRCA1-222ENST00000493919 BANK1Q8NDB2 785 aa14.2□□□□□ -0.14
BRCA1-222ENST00000493919 CHPF2Q9P2E5 772 aa14.2□□□□□ -0.14
BRCA1-222ENST00000493919 PPP1R1BQ9UD71 204 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-222ENST00000493919 BCORQ6W2J9 1755 aa14.2□□□□□ -0.14
BRCA1-222ENST00000493919 GYS1P13807 737 aa14.19□□□□□ -0.14
BRCA1-222ENST00000493919 PROSER3Q2NL68 480 aa14.19□□□□□ -0.14
BRCA1-222ENST00000493919 TWISTNBQ3B726 338 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-222ENST00000493919 CDCA7LQ96GN5 454 aa14.19□□□□□ -0.14
BRCA1-222ENST00000493919 ERBB4Q15303 1308 aa14.19□□□□□ -0.14
BRCA1-222ENST00000493919 NBPF5PQ86XG9 351 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-222ENST00000493919 NARFQ9UHQ1 456 aa14.19□□□□□ -0.14
BRCA1-222ENST00000493919 PTGER2P43116 358 aa14.18□□□□□ -0.14
BRCA1-222ENST00000493919 RBM28Q9NW13 759 aaKnown RBP14.18□□□□□ -0.14
BRCA1-222ENST00000493919 COL24A1Q17RW2 1714 aa14.17□□□□□ -0.14
BRCA1-222ENST00000493919 ZNF500O60304 480 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-222ENST00000493919 MMP10P09238 476 aa14.17□□□□□ -0.14
BRCA1-222ENST00000493919 SLFN5Q08AF3 891 aa14.17□□□□□ -0.14
BRCA1-222ENST00000493919 AIMP1Q12904 312 aaKnown RBP14.17□□□□□ -0.14
BRCA1-222ENST00000493919 PDIA6Q15084 440 aa14.17□□□□□ -0.14
BRCA1-222ENST00000493919 KIF6Q6ZMV9 814 aa14.17□□□□□ -0.14
BRCA1-222ENST00000493919 TTLL7Q6ZT98 887 aa14.17□□□□□ -0.14
BRCA1-222ENST00000493919 NLGN1Q8N2Q7 840 aa14.17□□□□□ -0.14
BRCA1-222ENST00000493919 DBF4Q9UBU7 674 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-222ENST00000493919 NRDCO43847 1150 aa14.16□□□□□ -0.14
BRCA1-222ENST00000493919 CCDC30Q5VVM6 783 aa14.16□□□□□ -0.14
BRCA1-222ENST00000493919 BICDL1Q6ZP65 573 aa14.16□□□□□ -0.14
BRCA1-222ENST00000493919 SGIP1Q9BQI5 828 aa14.16□□□□□ -0.14
BRCA1-222ENST00000493919 DDX21Q9NR30 783 aaKnown RBP eCLIP14.16□□□□□ -0.14
BRCA1-222ENST00000493919 CAMTA2O94983 1202 aa14.15□□□□□ -0.14
BRCA1-222ENST00000493919 ZKSCAN8Q15776 578 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-222ENST00000493919 RINLQ6ZS11 566 aa14.15□□□□□ -0.14
BRCA1-222ENST00000493919 STK31Q9BXU1 1019 aa14.15□□□□□ -0.14
BRCA1-222ENST00000493919 ZBTB3Q9H5J0 574 aa14.15□□□□□ -0.14
BRCA1-222ENST00000493919 BCL2L12Q9HB09 334 aa14.15□□□□□ -0.14
BRCA1-222ENST00000493919 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.15□□□□□ -0.144e-6■■■■■ 85.3
BRCA1-222ENST00000493919 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.14
BRCA1-222ENST00000493919 GOLIM4O00461 696 aa14.15□□□□□ -0.14
BRCA1-222ENST00000493919 XAGE3Q8WTP9 111 aa14.15□□□□□ -0.14
BRCA1-222ENST00000493919 EFCC1Q9HA90 598 aa14.15□□□□□ -0.14
BRCA1-222ENST00000493919 CCDC96Q2M329 555 aa14.14□□□□□ -0.15
BRCA1-222ENST00000493919 LRP10Q7Z4F1 713 aa14.14□□□□□ -0.15
BRCA1-222ENST00000493919 ZNF652Q9Y2D9 606 aa14.14□□□□□ -0.15
BRCA1-222ENST00000493919 UTRNP46939 3433 aa14.14□□□□□ -0.15
BRCA1-222ENST00000493919 COPS6Q7L5N1 327 aa14.13□□□□□ -0.15
BRCA1-222ENST00000493919 PARP3Q9Y6F1 533 aa14.13□□□□□ -0.15
BRCA1-222ENST00000493919 MAP3K15Q6ZN16 1313 aa14.13□□□□□ -0.15
BRCA1-222ENST00000493919 ARID4AP29374 1257 aaPredicted RBP14.13□□□□□ -0.15
BRCA1-222ENST00000493919 IRX5P78411 483 aaPredicted RBP14.13□□□□□ -0.15
BRCA1-222ENST00000493919 TBC1D9BQ66K14 1250 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms