RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 NPHP1O15259 732 aa14.88□□□□□ -0.03
CTSA-209ENST00000493522 LRP10Q7Z4F1 713 aa14.88□□□□□ -0.03
CTSA-209ENST00000493522 XAGE3Q8WTP9 111 aa14.88□□□□□ -0.03
CTSA-209ENST00000493522 HYPKQ9NX55 129 aa14.88□□□□□ -0.03
CTSA-209ENST00000493522 COL13A1Q5TAT6 717 aaPredicted RBP14.87□□□□□ -0.03
CTSA-209ENST00000493522 PRR5LQ6MZQ0 368 aa14.87□□□□□ -0.03
CTSA-209ENST00000493522 COPS6Q7L5N1 327 aa14.87□□□□□ -0.03
CTSA-209ENST00000493522 CNBD1Q8NA66 436 aa14.87□□□□□ -0.03
CTSA-209ENST00000493522 COL11A2P13942 1736 aaPredicted RBP14.86□□□□□ -0.03
CTSA-209ENST00000493522 LAMB2P55268 1798 aa14.86□□□□□ -0.03
CTSA-209ENST00000493522 C21orf2O43822 256 aa14.86□□□□□ -0.03
CTSA-209ENST00000493522 VAMP4O75379 141 aa14.86□□□□□ -0.03
CTSA-209ENST00000493522 ERFEQ4G0M1 354 aa14.86□□□□□ -0.03
CTSA-209ENST00000493522 SETDB2Q96T68 719 aa14.86□□□□□ -0.03
CTSA-209ENST00000493522 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
CTSA-209ENST00000493522 ST5P78524 1137 aa14.85□□□□□ -0.03
CTSA-209ENST00000493522 HLFQ16534 295 aa14.85□□□□□ -0.03
CTSA-209ENST00000493522 CNKSR1Q969H4 720 aa14.85□□□□□ -0.03
CTSA-209ENST00000493522 TAOK3Q9H2K8 898 aa14.85□□□□□ -0.03
CTSA-209ENST00000493522 PHAXQ9H814 394 aaKnown RBP14.85□□□□□ -0.03
CTSA-209ENST00000493522 LTBP3Q9NS15 1303 aa14.85□□□□□ -0.03
CTSA-209ENST00000493522 ERVV-1B6SEH8 477 aa14.84□□□□□ -0.03
CTSA-209ENST00000493522 RGL2O15211 777 aa14.84□□□□□ -0.03
CTSA-209ENST00000493522 SOGA3Q5TF21 947 aa14.84□□□□□ -0.03
CTSA-209ENST00000493522 CLEC4GQ6UXB4 293 aa14.84□□□□□ -0.03
CTSA-209ENST00000493522 TRMT2AQ8IZ69 625 aaKnown RBP14.84□□□□□ -0.03
CTSA-209ENST00000493522 CCDC24Q8N4L8 307 aa14.84□□□□□ -0.03
CTSA-209ENST00000493522 DDX60Q8IY21 1712 aaKnown RBP14.83□□□□□ -0.03
CTSA-209ENST00000493522 POTECB2RU33 542 aa14.83□□□□□ -0.04
CTSA-209ENST00000493522 STYK1Q6J9G0 422 aa14.83□□□□□ -0.04
CTSA-209ENST00000493522 TNS4Q8IZW8 715 aa14.83□□□□□ -0.04
CTSA-209ENST00000493522 YTHDC1Q96MU7 727 aaKnown RBP14.83□□□□□ -0.04
CTSA-209ENST00000493522 NIP7Q9Y221 180 aaKnown RBP eCLIP14.83□□□□□ -0.04
CTSA-209ENST00000493522 MYH3P11055 1940 aa14.83□□□□□ -0.04
CTSA-209ENST00000493522 CCDC88AQ3V6T2 1871 aa14.82□□□□□ -0.04
CTSA-209ENST00000493522 DDX58O95786 925 aaKnown RBP14.82□□□□□ -0.04
CTSA-209ENST00000493522 SLC4A2P04920 1241 aa14.82□□□□□ -0.04
CTSA-209ENST00000493522 GPTP24298 496 aa14.82□□□□□ -0.04
CTSA-209ENST00000493522 PRPF40BQ6NWY9 871 aaKnown RBP14.82□□□□□ -0.04
CTSA-209ENST00000493522 GIGYF2Q6Y7W6 1299 aaKnown RBP14.82□□□□□ -0.04
CTSA-209ENST00000493522 PLBD2Q8NHP8 589 aa14.82□□□□□ -0.04
CTSA-209ENST00000493522 MASTLQ96GX5 879 aa14.82□□□□□ -0.04
CTSA-209ENST00000493522 FER1L6Q2WGJ9 1857 aa14.82□□□□□ -0.04
CTSA-209ENST00000493522 FAM177BA6PVY3 158 aa14.81□□□□□ -0.04
CTSA-209ENST00000493522 HSPA1AP0DMV8 641 aaKnown RBP14.81□□□□□ -0.04
CTSA-209ENST00000493522 HSPA1BP0DMV9 641 aaKnown RBP14.81□□□□□ -0.04
CTSA-209ENST00000493522 SRGNP10124 158 aa14.81□□□□□ -0.04
CTSA-209ENST00000493522 HSP90AB3PQ58FF7 597 aa14.81□□□□□ -0.04
CTSA-209ENST00000493522 ANKRD13DQ6ZTN6 518 aa14.81□□□□□ -0.04
CTSA-209ENST00000493522 G2E3Q7L622 706 aa14.81□□□□□ -0.04
CTSA-209ENST00000493522 RIC3Q7Z5B4 369 aa14.81□□□□□ -0.04
CTSA-209ENST00000493522 DICER1Q9UPY3 1922 aaKnown RBP14.8□□□□□ -0.04
CTSA-209ENST00000493522 FLIIQ13045 1269 aa14.8□□□□□ -0.04
CTSA-209ENST00000493522 CHADLQ6NUI6 762 aa14.8□□□□□ -0.04
CTSA-209ENST00000493522 NBPF5PQ86XG9 351 aaPredicted RBP14.8□□□□□ -0.04
CTSA-209ENST00000493522 IQCA1LA6NCM1 817 aa14.79□□□□□ -0.04
CTSA-209ENST00000493522 CAPN15O75808 1086 aa14.79□□□□□ -0.04
CTSA-209ENST00000493522 CT47B1P0C2W7 299 aaPredicted RBP14.79□□□□□ -0.04
CTSA-209ENST00000493522 FKBP5Q13451 457 aaPredicted RBP14.79□□□□□ -0.04
CTSA-209ENST00000493522 UBN2Q6ZU65 1347 aa14.79□□□□□ -0.04
CTSA-209ENST00000493522 BCL2L13Q9BXK5 485 aa14.79□□□□□ -0.04
CTSA-209ENST00000493522 CREBZFQ9NS37 354 aa14.79□□□□□ -0.04
CTSA-209ENST00000493522 IBTKQ9P2D0 1353 aaPredicted RBP14.79□□□□□ -0.04
CTSA-209ENST00000493522 DDNO94850 711 aaPredicted RBP14.78□□□□□ -0.04
CTSA-209ENST00000493522 CCDC93Q567U6 631 aa14.78□□□□□ -0.04
CTSA-209ENST00000493522 ZNF34Q8IZ26 560 aa14.78□□□□□ -0.04
CTSA-209ENST00000493522 SSH1Q8WYL5 1049 aa14.78□□□□□ -0.04
CTSA-209ENST00000493522 ZNF428Q96B54 188 aa14.78□□□□□ -0.04
CTSA-209ENST00000493522 SMC4Q9NTJ3 1288 aa14.78□□□□□ -0.04
CTSA-209ENST00000493522 MAP3K2Q9Y2U5 619 aa14.78□□□□□ -0.04
CTSA-209ENST00000493522 NPR1P16066 1061 aa14.77□□□□□ -0.05
CTSA-209ENST00000493522 TCIRG1Q13488 830 aa14.77□□□□□ -0.05
CTSA-209ENST00000493522 PARP10Q53GL7 1025 aa14.77□□□□□ -0.05
CTSA-209ENST00000493522 KSR2Q6VAB6 950 aa14.77□□□□□ -0.05
CTSA-209ENST00000493522 MYD88Q99836 296 aa14.77□□□□□ -0.05
CTSA-209ENST00000493522 NYXQ9GZU5 481 aa14.77□□□□□ -0.05
CTSA-209ENST00000493522 SLX4Q8IY92 1834 aa14.77□□□□□ -0.05
CTSA-209ENST00000493522 ABCC12Q96J65 1359 aa14.76□□□□□ -0.05
CTSA-209ENST00000493522 SPEF2Q9C093 1822 aa14.76□□□□□ -0.05
CTSA-209ENST00000493522 PI4KAP2A4QPH2 592 aa14.76□□□□□ -0.05
CTSA-209ENST00000493522 ATP5J2-PTCD1G3V325 749 aa14.76□□□□□ -0.05
CTSA-209ENST00000493522 GTF2E1P29083 439 aaPredicted RBP14.76□□□□□ -0.05
CTSA-209ENST00000493522 ALDH1L2Q3SY69 923 aa14.76□□□□□ -0.05
CTSA-209ENST00000493522 TPTE2Q6XPS3 522 aa14.76□□□□□ -0.05
CTSA-209ENST00000493522 MRPL50Q8N5N7 158 aaKnown RBP14.76□□□□□ -0.05
CTSA-209ENST00000493522 PI4KAP1Q8N8J0 262 aa14.76□□□□□ -0.05
CTSA-209ENST00000493522 L3MBTL3Q96JM7 780 aaPredicted RBP14.76□□□□□ -0.05
CTSA-209ENST00000493522 NTSR2O95665 410 aa14.75□□□□□ -0.05
CTSA-209ENST00000493522 POTEIP0CG38 1075 aa14.75□□□□□ -0.05
CTSA-209ENST00000493522 POTEJP0CG39 1038 aa14.75□□□□□ -0.05
CTSA-209ENST00000493522 NEXNQ0ZGT2 675 aa14.75□□□□□ -0.05
CTSA-209ENST00000493522 SUSD4Q5VX71 490 aa14.75□□□□□ -0.05
CTSA-209ENST00000493522 PPP1R42Q7Z4L9 355 aa14.75□□□□□ -0.05
CTSA-209ENST00000493522 NLRP10Q86W26 655 aa14.75□□□□□ -0.05
CTSA-209ENST00000493522 LDHDQ86WU2 507 aa14.75□□□□□ -0.05
CTSA-209ENST00000493522 NUTM1Q86Y26 1132 aa14.75□□□□□ -0.05
CTSA-209ENST00000493522 ISCA1Q9BUE6 129 aa14.75□□□□□ -0.05
CTSA-209ENST00000493522 METTL22Q9BUU2 404 aaPredicted RBP14.75□□□□□ -0.05
CTSA-209ENST00000493522 MKRN1Q9UHC7 482 aaKnown RBP14.75□□□□□ -0.05
CTSA-209ENST00000493522 TAF1P21675 1872 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms