RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 OLFM4Q6UX06 510 aa18.37■□□□□ 0.53
ATG3-206ENST00000492886 COPS6Q7L5N1 327 aa18.37■□□□□ 0.53
ATG3-206ENST00000492886 DNAJC5GQ8N7S2 189 aa18.37■□□□□ 0.53
ATG3-206ENST00000492886 RNF123Q5XPI4 1314 aa18.37■□□□□ 0.53
ATG3-206ENST00000492886 APAF1O14727 1248 aa18.36■□□□□ 0.53
ATG3-206ENST00000492886 DPY19L2Q6NUT2 758 aa18.36■□□□□ 0.53
ATG3-206ENST00000492886 PPP1R42Q7Z4L9 355 aa18.36■□□□□ 0.53
ATG3-206ENST00000492886 RTKN2Q8IZC4 609 aa18.36■□□□□ 0.53
ATG3-206ENST00000492886 XAGE3Q8WTP9 111 aa18.36■□□□□ 0.53
ATG3-206ENST00000492886 TAF1P21675 1872 aa18.35■□□□□ 0.53
ATG3-206ENST00000492886 ADAMTSL1Q8N6G6 1762 aa18.35■□□□□ 0.53
ATG3-206ENST00000492886 COL4A5P29400 1685 aa18.35■□□□□ 0.53
ATG3-206ENST00000492886 CCDC184Q52MB2 194 aa18.35■□□□□ 0.53
ATG3-206ENST00000492886 C3orf67Q6ZVT6 689 aa18.35■□□□□ 0.53
ATG3-206ENST00000492886 NECTIN2Q92692 538 aa18.35■□□□□ 0.53
ATG3-206ENST00000492886 CRAMP1Q96RY5 1269 aa18.35■□□□□ 0.53
ATG3-206ENST00000492886 MBIPQ9NS73 344 aa18.35■□□□□ 0.53
ATG3-206ENST00000492886 CHPF2Q9P2E5 772 aa18.35■□□□□ 0.53
ATG3-206ENST00000492886 ZEB1P37275 1124 aaPredicted RBP18.34■□□□□ 0.53
ATG3-206ENST00000492886 HSP90AB3PQ58FF7 597 aa18.34■□□□□ 0.53
ATG3-206ENST00000492886 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
ATG3-206ENST00000492886 SMC1BQ8NDV3 1235 aa18.34■□□□□ 0.53
ATG3-206ENST00000492886 PSMD1Q99460 953 aa18.34■□□□□ 0.53
ATG3-206ENST00000492886 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
ATG3-206ENST00000492886 LAS1LQ9Y4W2 734 aaKnown RBP18.34■□□□□ 0.53
ATG3-206ENST00000492886 LRRC37AA6NMS7 1700 aa18.34■□□□□ 0.53
ATG3-206ENST00000492886 TCIRG1Q13488 830 aa18.33■□□□□ 0.52
ATG3-206ENST00000492886 CC2D2BQ6DHV5 1058 aa18.33■□□□□ 0.52
ATG3-206ENST00000492886 L3MBTL3Q96JM7 780 aaPredicted RBP18.33■□□□□ 0.52
ATG3-206ENST00000492886 UTP14AQ9BVJ6 771 aaKnown RBP18.33■□□□□ 0.52
ATG3-206ENST00000492886 DDNO94850 711 aaPredicted RBP18.32■□□□□ 0.52
ATG3-206ENST00000492886 AIMP1Q12904 312 aaKnown RBP18.32■□□□□ 0.52
ATG3-206ENST00000492886 HDGFL1Q5TGJ6 251 aa18.32■□□□□ 0.52
ATG3-206ENST00000492886 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
ATG3-206ENST00000492886 ZNF277Q9NRM2 450 aaPredicted RBP18.32■□□□□ 0.52
ATG3-206ENST00000492886 DBF4Q9UBU7 674 aaPredicted RBP18.32■□□□□ 0.52
ATG3-206ENST00000492886 IARSP41252 1262 aaKnown RBP18.31■□□□□ 0.52
ATG3-206ENST00000492886 SYNE4Q8N205 404 aa18.31■□□□□ 0.52
ATG3-206ENST00000492886 PLBD2Q8NHP8 589 aa18.31■□□□□ 0.52
ATG3-206ENST00000492886 RPGRQ92834 1020 aaKnown RBP18.31■□□□□ 0.52
ATG3-206ENST00000492886 FZD9O00144 591 aa18.3■□□□□ 0.52
ATG3-206ENST00000492886 GNAI1P63096 354 aa18.3■□□□□ 0.52
ATG3-206ENST00000492886 GRIPAP1Q4V328 841 aa18.3■□□□□ 0.52
ATG3-206ENST00000492886 SLC51AQ86UW1 340 aa18.3■□□□□ 0.52
ATG3-206ENST00000492886 RBM17Q96I25 401 aaKnown RBP18.3■□□□□ 0.52
ATG3-206ENST00000492886 NLRP3Q96P20 1036 aa18.3■□□□□ 0.52
ATG3-206ENST00000492886 ISCA1Q9BUE6 129 aa18.3■□□□□ 0.52
ATG3-206ENST00000492886 ZNF541Q9H0D2 1346 aa18.29■□□□□ 0.52
ATG3-206ENST00000492886 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
ATG3-206ENST00000492886 HYPKQ9NX55 129 aa18.29■□□□□ 0.52
ATG3-206ENST00000492886 LTBP1Q14766 1721 aa18.29■□□□□ 0.52
ATG3-206ENST00000492886 ABCC4O15439 1325 aa18.28■□□□□ 0.52
ATG3-206ENST00000492886 ANKRD13DQ6ZTN6 518 aa18.28■□□□□ 0.52
ATG3-206ENST00000492886 COL4A1P02462 1669 aa18.28■□□□□ 0.52
ATG3-206ENST00000492886 DUOX1Q9NRD9 1551 aa18.27■□□□□ 0.52
ATG3-206ENST00000492886 PPEF1O14829 653 aaPredicted RBP18.27■□□□□ 0.52
ATG3-206ENST00000492886 TRIM28Q13263 835 aaKnown RBP18.27■□□□□ 0.52
ATG3-206ENST00000492886 CCDC27Q2M243 656 aa18.27■□□□□ 0.52
ATG3-206ENST00000492886 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
ATG3-206ENST00000492886 CACNA1FO60840 1977 aa18.27■□□□□ 0.52
ATG3-206ENST00000492886 SH3TC1Q8TE82 1336 aa18.26■□□□□ 0.51
ATG3-206ENST00000492886 HTRA3P83110 453 aa18.26■□□□□ 0.51
ATG3-206ENST00000492886 ATP6V0A2Q9Y487 856 aa18.26■□□□□ 0.51
ATG3-206ENST00000492886 POTEIP0CG38 1075 aa18.25■□□□□ 0.51
ATG3-206ENST00000492886 POTEJP0CG39 1038 aa18.25■□□□□ 0.51
ATG3-206ENST00000492886 HCLS1P14317 486 aaPredicted RBP18.25■□□□□ 0.51
ATG3-206ENST00000492886 JMYQ8N9B5 988 aa18.25■□□□□ 0.51
ATG3-206ENST00000492886 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
ATG3-206ENST00000492886 KLRG1Q96E93 195 aa18.25■□□□□ 0.51
ATG3-206ENST00000492886 RTFDC1Q9BY42 306 aaPredicted RBP18.25■□□□□ 0.51
ATG3-206ENST00000492886 TAF1DQ9H5J8 278 aaPredicted RBP18.25■□□□□ 0.51
ATG3-206ENST00000492886 TRMT112Q9UI30 125 aaKnown RBP18.25■□□□□ 0.51
ATG3-206ENST00000492886 IQCA1LA6NCM1 817 aa18.24■□□□□ 0.51
ATG3-206ENST00000492886 ZNF316A6NFI3 1004 aaPredicted RBP18.24■□□□□ 0.51
ATG3-206ENST00000492886 BBOX1O75936 387 aa18.23■□□□□ 0.51
ATG3-206ENST00000492886 CHADLQ6NUI6 762 aa18.23■□□□□ 0.51
ATG3-206ENST00000492886 SP8Q8IXZ3 490 aa18.23■□□□□ 0.51
ATG3-206ENST00000492886 GPC2Q8N158 579 aa18.23■□□□□ 0.51
ATG3-206ENST00000492886 VPS33BQ9H267 617 aa18.23■□□□□ 0.51
ATG3-206ENST00000492886 PHAXQ9H814 394 aaKnown RBP18.23■□□□□ 0.51
ATG3-206ENST00000492886 MYH3P11055 1940 aa18.22■□□□□ 0.51
ATG3-206ENST00000492886 WWC1Q8IX03 1113 aa18.22■□□□□ 0.51
ATG3-206ENST00000492886 ATP5J2-PTCD1G3V325 749 aa18.21■□□□□ 0.51
ATG3-206ENST00000492886 ELL2O00472 640 aaPredicted RBP18.21■□□□□ 0.51
ATG3-206ENST00000492886 GRAPQ13588 217 aa18.21■□□□□ 0.51
ATG3-206ENST00000492886 SF3B3Q15393 1217 aaKnown RBP18.21■□□□□ 0.51
ATG3-206ENST00000492886 LDHDQ86WU2 507 aa18.21■□□□□ 0.51
ATG3-206ENST00000492886 TSPYL6Q8N831 410 aa18.21■□□□□ 0.51
ATG3-206ENST00000492886 GRAPLQ8TC17 118 aaPredicted RBP18.21■□□□□ 0.51
ATG3-206ENST00000492886 JDP2Q8WYK2 163 aa18.21■□□□□ 0.51
ATG3-206ENST00000492886 IL16Q14005 1332 aa18.21■□□□□ 0.51
ATG3-206ENST00000492886 PASKQ96RG2 1323 aa18.21■□□□□ 0.51
ATG3-206ENST00000492886 FAM89AQ96GI7 184 aa18.2■□□□□ 0.5
ATG3-206ENST00000492886 HACL1Q9UJ83 578 aa18.2■□□□□ 0.5
ATG3-206ENST00000492886 TCERG1O14776 1098 aaKnown RBP18.19■□□□□ 0.5
ATG3-206ENST00000492886 DDX46Q7L014 1031 aaKnown RBP18.19■□□□□ 0.5
ATG3-206ENST00000492886 TMC4Q7Z404 712 aa18.19■□□□□ 0.5
ATG3-206ENST00000492886 LARGE2Q8N3Y3 721 aa18.19■□□□□ 0.5
ATG3-206ENST00000492886 EPHX2P34913 555 aa18.18■□□□□ 0.5
ATG3-206ENST00000492886 EIF6P56537 245 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms