RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 KRT24Q2M2I5 525 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 TSHZ3Q63HK5 1081 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 SRLQ86TD4 932 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 CCDC83Q8IWF9 413 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 C10orf67Q8IYJ2 551 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 IQUBQ8NA54 791 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 FBXO18Q8NFZ0 1043 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 SMARCE1Q969G3 411 aa7.57□□□□□ -1.2
CCDC6-202ENST00000491922 TRMT1Q9NXH9 659 aaKnown RBP7.57□□□□□ -1.2
CCDC6-202ENST00000491922 CFAP65Q6ZU64 1925 aaKnown RBP7.56□□□□□ -1.2
CCDC6-202ENST00000491922 PSDA5PKW4 1024 aaPredicted RBP7.56□□□□□ -1.2
CCDC6-202ENST00000491922 KIF3BO15066 747 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 CCT4P50991 539 aaKnown RBP7.56□□□□□ -1.2
CCDC6-202ENST00000491922 IQCB1Q15051 598 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 VPS53Q5VIR6 699 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 UBXN4Q92575 508 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 SRRTQ9BXP5 876 aaKnown RBP7.56□□□□□ -1.2
CCDC6-202ENST00000491922 ATG3Q9NT62 314 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 HYPKQ9NX55 129 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 ORC3Q9UBD5 711 aaPredicted RBP7.56□□□□□ -1.2
CCDC6-202ENST00000491922 KCNG1Q9UIX4 513 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 EXOC6BQ9Y2D4 811 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 MAP2P11137 1827 aaKnown RBP7.56□□□□□ -1.2
CCDC6-202ENST00000491922 SGSM2O43147 1006 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 GNAI2P04899 355 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 HMOX1P09601 288 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 ARID5BQ14865 1188 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 HDGFL2Q7Z4V5 671 aaPredicted RBP7.56□□□□□ -1.2
CCDC6-202ENST00000491922 EXOC4Q96A65 974 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 SPATA32Q96LK8 384 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 MYCBPQ99417 103 aaPredicted RBP7.56□□□□□ -1.2
CCDC6-202ENST00000491922 IMPACTQ9P2X3 320 aa7.56□□□□□ -1.2
CCDC6-202ENST00000491922 SETD1AO15047 1707 aaKnown RBP7.55□□□□□ -1.2
CCDC6-202ENST00000491922 YTHDC2Q9H6S0 1430 aaKnown RBP7.55□□□□□ -1.2
CCDC6-202ENST00000491922 A0A1B0GUL7 405 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 CCP110O43303 1012 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 NRDCO43847 1150 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 CHGAP10645 457 aaKnown RBP7.55□□□□□ -1.2
CCDC6-202ENST00000491922 CASTP20810 708 aaKnown RBP7.55□□□□□ -1.2
CCDC6-202ENST00000491922 OAS2P29728 719 aaKnown RBP7.55□□□□□ -1.2
CCDC6-202ENST00000491922 ST5P78524 1137 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 STX1AQ16623 288 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 CCDC158Q5M9N0 1113 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 LARP1BQ659C4 914 aaKnown RBP7.55□□□□□ -1.2
CCDC6-202ENST00000491922 LSG1Q9H089 658 aaKnown RBP7.55□□□□□ -1.2
CCDC6-202ENST00000491922 RRP15Q9Y3B9 282 aaKnown RBP7.55□□□□□ -1.2
CCDC6-202ENST00000491922 PHLPP2Q6ZVD8 1323 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.55□□□□□ -1.2
CCDC6-202ENST00000491922 TRIM66O15016 1216 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 CTAGE5O15320 804 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 LARGE1O95461 756 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 IVLP07476 585 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 GUCY2CP25092 1073 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 AXDND1Q5T1B0 1012 aaPredicted RBP7.55□□□□□ -1.2
CCDC6-202ENST00000491922 UNC5CLQ8IV45 518 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 CCDC150Q8NCX0 1101 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 PPP1R13BQ96KQ4 1090 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 NCAPGQ9BPX3 1015 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 TM6SF1Q9BZW5 370 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 OSBPL5Q9H0X9 879 aaPredicted RBP7.55□□□□□ -1.2
CCDC6-202ENST00000491922 PDRG1Q9NUG6 133 aa7.55□□□□□ -1.2
CCDC6-202ENST00000491922 PLEKHG2Q9H7P9 1386 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 BECN2A8MW95 431 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 SMC1AQ14683 1233 aaKnown RBP7.54□□□□□ -1.2
CCDC6-202ENST00000491922 RASEFQ8IZ41 740 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 AFAP1Q8N556 730 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 MNS1Q8NEH6 495 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 LEO1Q8WVC0 666 aaPredicted RBP7.54□□□□□ -1.2
CCDC6-202ENST00000491922 ZBTB9Q96C00 473 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 IL25Q9H293 177 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 LCMT1Q9UIC8 334 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 USP16Q9Y5T5 823 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 EFCAB8A8MWE9 144 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 SOX12O15370 315 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 NR1I2O75469 434 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 E4F1Q66K89 784 aaPredicted RBP7.54□□□□□ -1.2
CCDC6-202ENST00000491922 LRRN4CLQ8ND94 238 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 BICD2Q8TD16 824 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 LARP6Q9BRS8 491 aaKnown RBP7.54□□□□□ -1.2
CCDC6-202ENST00000491922 NEXMIFQ5QGS0 1516 aa7.54□□□□□ -1.2
CCDC6-202ENST00000491922 CLGNO14967 610 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
CCDC6-202ENST00000491922 TADA3O75528 432 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 IL13P35225 146 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 ACTN2P35609 894 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 PSEN1P49768 467 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 TTC31Q49AM3 519 aaPredicted RBP7.53□□□□□ -1.2
CCDC6-202ENST00000491922 CDC37L1Q7L3B6 337 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 CYP46A1Q9Y6A2 500 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 ITSN1Q15811 1721 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 CRYBG1Q9Y4K1 1723 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 NPM3O75607 178 aaKnown RBP7.53□□□□□ -1.2
CCDC6-202ENST00000491922 TBC1D8O95759 1140 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 GNAI3P08754 354 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 MAGEA9P43362 315 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 ATP8B2P98198 1209 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 LEKR1Q6ZMV7 388 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 TMX1Q9H3N1 280 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 ZSWIM6Q9HCJ5 1215 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms