RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 RAPGEF4Q8WZA2 1011 aa9.29□□□□□ -0.92
VPS45-209ENST00000491789 RTF1Q92541 710 aaKnown RBP9.29□□□□□ -0.92
VPS45-209ENST00000491789 CHMP4AQ9BY43 222 aa9.29□□□□□ -0.92
VPS45-209ENST00000491789 API5Q9BZZ5 524 aaKnown RBP9.29□□□□□ -0.92
VPS45-209ENST00000491789 MBIPQ9NS73 344 aa9.29□□□□□ -0.92
VPS45-209ENST00000491789 WDR70Q9NW82 654 aa9.29□□□□□ -0.92
VPS45-209ENST00000491789 COG6Q9Y2V7 657 aa9.29□□□□□ -0.92
VPS45-209ENST00000491789 NCAPD2Q15021 1401 aa9.29□□□□□ -0.92
VPS45-209ENST00000491789 UBR3Q6ZT12 1888 aa9.28□□□□□ -0.92
VPS45-209ENST00000491789 PTPREP23469 700 aa9.28□□□□□ -0.92
VPS45-209ENST00000491789 ANP32AP39687 249 aaKnown RBP9.28□□□□□ -0.92
VPS45-209ENST00000491789 EYA1Q99502 592 aa9.28□□□□□ -0.92
VPS45-209ENST00000491789 TFCP2L1Q9NZI6 479 aa9.28□□□□□ -0.92
VPS45-209ENST00000491789 CCNL1Q9UK58 526 aaPredicted RBP9.28□□□□□ -0.92
VPS45-209ENST00000491789 DLG5Q8TDM6 1919 aa9.27□□□□□ -0.93
VPS45-209ENST00000491789 MAP3K5Q99683 1374 aa9.27□□□□□ -0.93
VPS45-209ENST00000491789 TK2O00142 265 aa9.27□□□□□ -0.93
VPS45-209ENST00000491789 CHL1O00533 1208 aa9.27□□□□□ -0.93
VPS45-209ENST00000491789 VAMP4O75379 141 aa9.27□□□□□ -0.93
VPS45-209ENST00000491789 TRIM27P14373 513 aa9.27□□□□□ -0.93
VPS45-209ENST00000491789 TWISTNBQ3B726 338 aaPredicted RBP9.27□□□□□ -0.93
VPS45-209ENST00000491789 MPRIPQ6WCQ1 1025 aa9.27□□□□□ -0.93
VPS45-209ENST00000491789 AEBP1Q8IUX7 1158 aa9.27□□□□□ -0.93
VPS45-209ENST00000491789 EMILIN3Q9NT22 766 aa9.27□□□□□ -0.93
VPS45-209ENST00000491789 FOSBP53539 338 aa9.26□□□□□ -0.93
VPS45-209ENST00000491789 HDAC1Q13547 482 aaPredicted RBP9.26□□□□□ -0.93
VPS45-209ENST00000491789 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
VPS45-209ENST00000491789 SMIM5Q71RC9 77 aa9.26□□□□□ -0.93
VPS45-209ENST00000491789 AMIGO3Q86WK7 504 aa9.26□□□□□ -0.93
VPS45-209ENST00000491789 MRPL50Q8N5N7 158 aaKnown RBP9.26□□□□□ -0.93
VPS45-209ENST00000491789 ZNF784Q8NCA9 323 aaPredicted RBP9.26□□□□□ -0.93
VPS45-209ENST00000491789 NLGN2Q8NFZ4 835 aa9.26□□□□□ -0.93
VPS45-209ENST00000491789 ZDHHC16Q969W1 377 aa9.26□□□□□ -0.93
VPS45-209ENST00000491789 BCL2L13Q9BXK5 485 aa9.26□□□□□ -0.93
VPS45-209ENST00000491789 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
VPS45-209ENST00000491789 NOB1Q9ULX3 412 aaKnown RBP9.26□□□□□ -0.93
VPS45-209ENST00000491789 LAS1LQ9Y4W2 734 aaKnown RBP9.26□□□□□ -0.93
VPS45-209ENST00000491789 PTPRCP08575 1304 aa9.26□□□□□ -0.93
VPS45-209ENST00000491789 PCDH11XQ9BZA7 1347 aa9.26□□□□□ -0.93
VPS45-209ENST00000491789 PCDH11YQ9BZA8 1340 aa9.26□□□□□ -0.93
VPS45-209ENST00000491789 C4BP0C0L5 1744 aa9.25□□□□□ -0.93
VPS45-209ENST00000491789 ITPRIPQ8IWB1 547 aa9.25□□□□□ -0.93
VPS45-209ENST00000491789 PIGBQ92521 554 aa9.25□□□□□ -0.93
VPS45-209ENST00000491789 BACH2Q9BYV9 841 aa9.25□□□□□ -0.93
VPS45-209ENST00000491789 ABCC4O15439 1325 aa9.25□□□□□ -0.93
VPS45-209ENST00000491789 PALLDQ8WX93 1383 aa9.24□□□□□ -0.93
VPS45-209ENST00000491789 GNAT3A8MTJ3 354 aa9.24□□□□□ -0.93
VPS45-209ENST00000491789 RLBP1P12271 317 aa9.24□□□□□ -0.93
VPS45-209ENST00000491789 POLD1P28340 1107 aa9.24□□□□□ -0.93
VPS45-209ENST00000491789 MTHFSDQ2M296 383 aaKnown RBP9.24□□□□□ -0.93
VPS45-209ENST00000491789 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
VPS45-209ENST00000491789 AMOTQ4VCS5 1084 aa9.24□□□□□ -0.93
VPS45-209ENST00000491789 THUMPD2Q9BTF0 503 aaKnown RBP9.24□□□□□ -0.93
VPS45-209ENST00000491789 VIRMAQ69YN4 1812 aaKnown RBP9.24□□□□□ -0.93
VPS45-209ENST00000491789 DPYSL4O14531 572 aa9.23□□□□□ -0.93
VPS45-209ENST00000491789 MSL1Q68DK7 614 aa9.23□□□□□ -0.93
VPS45-209ENST00000491789 HOXB7P09629 217 aa9.22□□□□□ -0.93
VPS45-209ENST00000491789 PHKG2P15735 406 aa9.22□□□□□ -0.93
VPS45-209ENST00000491789 GPR162Q16538 588 aa9.22□□□□□ -0.93
VPS45-209ENST00000491789 DDRGK1Q96HY6 314 aa9.22□□□□□ -0.93
VPS45-209ENST00000491789 ZBTB40Q9NUA8 1239 aa9.22□□□□□ -0.93
VPS45-209ENST00000491789 TSPYL4Q9UJ04 414 aa9.22□□□□□ -0.93
VPS45-209ENST00000491789 ASAP1Q9ULH1 1129 aa9.22□□□□□ -0.93
VPS45-209ENST00000491789 SPG7Q9UQ90 795 aa9.22□□□□□ -0.93
VPS45-209ENST00000491789 MYH14Q7Z406 1995 aaKnown RBP9.22□□□□□ -0.93
VPS45-209ENST00000491789 CEMIPQ8WUJ3 1361 aa9.22□□□□□ -0.93
VPS45-209ENST00000491789 PXDNLA1KZ92 1463 aa9.21□□□□□ -0.93
VPS45-209ENST00000491789 EIF5BO60841 1220 aaKnown RBP9.21□□□□□ -0.94
VPS45-209ENST00000491789 YBX3P16989 372 aaKnown RBP eCLIP9.21□□□□□ -0.94
VPS45-209ENST00000491789 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
VPS45-209ENST00000491789 ITPK1Q13572 414 aa9.21□□□□□ -0.94
VPS45-209ENST00000491789 PLEKHO1Q53GL0 409 aaPredicted RBP9.21□□□□□ -0.94
VPS45-209ENST00000491789 MCM10Q7L590 875 aa9.21□□□□□ -0.94
VPS45-209ENST00000491789 IFNL2Q8IZJ0 200 aa9.21□□□□□ -0.94
VPS45-209ENST00000491789 TMEM57Q8N5G2 664 aa9.21□□□□□ -0.94
VPS45-209ENST00000491789 C8orf58Q8NAV2 365 aa9.21□□□□□ -0.94
VPS45-209ENST00000491789 LINC00116Q8NCU8 138 aa9.21□□□□□ -0.94
VPS45-209ENST00000491789 SMARCC1Q92922 1105 aaPredicted RBP9.21□□□□□ -0.94
VPS45-209ENST00000491789 FBXW7Q969H0 707 aa9.21□□□□□ -0.94
VPS45-209ENST00000491789 ATG3Q9NT62 314 aa9.21□□□□□ -0.94
VPS45-209ENST00000491789 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.94
VPS45-209ENST00000491789 LOC102724428A0A0B4J2F2 783 aa9.2□□□□□ -0.94
VPS45-209ENST00000491789 IGHDP01880 384 aa9.2□□□□□ -0.94
VPS45-209ENST00000491789 SIK1P57059 783 aa9.2□□□□□ -0.94
VPS45-209ENST00000491789 TAF7Q15545 349 aaPredicted RBP9.2□□□□□ -0.94
VPS45-209ENST00000491789 INTS3Q68E01 1043 aaKnown RBP9.2□□□□□ -0.94
VPS45-209ENST00000491789 ERICH6Q7L0X2 663 aa9.2□□□□□ -0.94
VPS45-209ENST00000491789 SMC5Q8IY18 1101 aa9.2□□□□□ -0.94
VPS45-209ENST00000491789 TSPYL6Q8N831 410 aa9.2□□□□□ -0.94
VPS45-209ENST00000491789 GCC1Q96CN9 775 aa9.2□□□□□ -0.94
VPS45-209ENST00000491789 SLC4A9Q96Q91 983 aa9.2□□□□□ -0.94
VPS45-209ENST00000491789 STK31Q9BXU1 1019 aa9.2□□□□□ -0.94
VPS45-209ENST00000491789 GOLGB1Q14789 3259 aaKnown RBP9.2□□□□□ -0.94
VPS45-209ENST00000491789 COL5A3P25940 1745 aaPredicted RBP9.19□□□□□ -0.94
VPS45-209ENST00000491789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.19□□□□□ -0.94
VPS45-209ENST00000491789 GOLGA8CPA6NN73 597 aa9.19□□□□□ -0.94
VPS45-209ENST00000491789 PHF14O94880 888 aa9.19□□□□□ -0.94
VPS45-209ENST00000491789 DCTN1Q14203 1278 aa9.19□□□□□ -0.94
VPS45-209ENST00000491789 E2F4Q16254 413 aa9.19□□□□□ -0.94
VPS45-209ENST00000491789 AKAP4Q5JQC9 854 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms