RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 NBPF14Q5TI25 921 aa21.86■■□□□ 1.09
EXD3-212ENST00000491734 NBPF10Q6P3W6 841 aaKnown RBP21.86■■□□□ 1.09
EXD3-212ENST00000491734 NBPF15Q8N660 670 aa21.86■■□□□ 1.09
EXD3-212ENST00000491734 PI4K2BQ8TCG2 481 aa21.86■■□□□ 1.09
EXD3-212ENST00000491734 HDAC5Q9UQL6 1122 aa21.86■■□□□ 1.09
EXD3-212ENST00000491734 CHMLP26374 656 aa21.85■■□□□ 1.09
EXD3-212ENST00000491734 CAVIN1Q6NZI2 390 aaKnown RBP21.85■■□□□ 1.09
EXD3-212ENST00000491734 ST18O60284 1047 aa21.85■■□□□ 1.09
EXD3-212ENST00000491734 REC8O95072 547 aa21.85■■□□□ 1.09
EXD3-212ENST00000491734 EPHA10Q5JZY3 1008 aa21.85■■□□□ 1.09
EXD3-212ENST00000491734 ESYT1Q9BSJ8 1104 aa21.85■■□□□ 1.09
EXD3-212ENST00000491734 TNS2Q63HR2 1409 aa21.85■■□□□ 1.09
EXD3-212ENST00000491734 AK9Q5TCS8 1911 aa21.84■■□□□ 1.09
EXD3-212ENST00000491734 ATP5J2-PTCD1G3V325 749 aa21.84■■□□□ 1.09
EXD3-212ENST00000491734 RBSNQ9H1K0 784 aa21.84■■□□□ 1.09
EXD3-212ENST00000491734 A1BGP04217 495 aa21.83■■□□□ 1.09
EXD3-212ENST00000491734 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.83■■□□□ 1.09
EXD3-212ENST00000491734 ITGB4P16144 1822 aa21.82■■□□□ 1.08
EXD3-212ENST00000491734 MAP7D2Q96T17 732 aa21.82■■□□□ 1.08
EXD3-212ENST00000491734 NWD2Q9ULI1 1742 aa21.82■■□□□ 1.08
EXD3-212ENST00000491734 TUBGCP6Q96RT7 1819 aa21.82■■□□□ 1.08
EXD3-212ENST00000491734 LRP6O75581 1613 aa21.82■■□□□ 1.08
EXD3-212ENST00000491734 KLHDC4Q8TBB5 520 aa21.81■■□□□ 1.08
EXD3-212ENST00000491734 ADAMTS2O95450 1211 aa21.81■■□□□ 1.08
EXD3-212ENST00000491734 TTLL7Q6ZT98 887 aa21.81■■□□□ 1.08
EXD3-212ENST00000491734 PLBD2Q8NHP8 589 aa21.81■■□□□ 1.08
EXD3-212ENST00000491734 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.81■■□□□ 1.08
EXD3-212ENST00000491734 CLASRPQ8N2M8 674 aaKnown RBP21.8■■□□□ 1.08
EXD3-212ENST00000491734 GPT2Q8TD30 523 aa21.8■■□□□ 1.08
EXD3-212ENST00000491734 SASH1O94885 1247 aa21.8■■□□□ 1.08
EXD3-212ENST00000491734 PRIM1P49642 420 aaKnown RBP21.8■■□□□ 1.08
EXD3-212ENST00000491734 LRSAM1Q6UWE0 723 aa21.8■■□□□ 1.08
EXD3-212ENST00000491734 SIL1Q9H173 461 aa21.8■■□□□ 1.08
EXD3-212ENST00000491734 IL25Q9H293 177 aa21.8■■□□□ 1.08
EXD3-212ENST00000491734 ZDHHC9Q9Y397 364 aa21.8■■□□□ 1.08
EXD3-212ENST00000491734 PKP1Q13835 747 aa21.79■■□□□ 1.08
EXD3-212ENST00000491734 CSPP1Q1MSJ5 1256 aa21.79■■□□□ 1.08
EXD3-212ENST00000491734 UBE3BQ7Z3V4 1068 aa21.78■■□□□ 1.08
EXD3-212ENST00000491734 ERC1Q8IUD2 1116 aa21.78■■□□□ 1.08
EXD3-212ENST00000491734 TMOD3Q9NYL9 352 aa21.78■■□□□ 1.08
EXD3-212ENST00000491734 ZKSCAN5Q9Y2L8 839 aa21.78■■□□□ 1.08
EXD3-212ENST00000491734 USP42Q9H9J4 1324 aaKnown RBP21.78■■□□□ 1.08
EXD3-212ENST00000491734 G3BP1Q13283 466 aaKnown RBP eCLIP21.78■■□□□ 1.08
EXD3-212ENST00000491734 SLIT2O94813 1529 aa21.78■■□□□ 1.08
EXD3-212ENST00000491734 ARFGEF2Q9Y6D5 1785 aa21.77■■□□□ 1.08
EXD3-212ENST00000491734 SPATA31A1Q5TZJ5 1347 aa21.77■■□□□ 1.08
EXD3-212ENST00000491734 NCLP19338 710 aaKnown RBP21.77■■□□□ 1.08
EXD3-212ENST00000491734 AACSQ86V21 672 aa21.77■■□□□ 1.08
EXD3-212ENST00000491734 ANO2Q9NQ90 1003 aa21.77■■□□□ 1.08
EXD3-212ENST00000491734 A0A087WZG4 1122 aa21.77■■□□□ 1.07
EXD3-212ENST00000491734 PRPF40AO75400 957 aaKnown RBP21.77■■□□□ 1.07
EXD3-212ENST00000491734 MBD3O95983 291 aa21.77■■□□□ 1.07
EXD3-212ENST00000491734 THRAP3Q9Y2W1 955 aaKnown RBP21.77■■□□□ 1.07
EXD3-212ENST00000491734 IFIT2P09913 472 aaKnown RBP21.76■■□□□ 1.07
EXD3-212ENST00000491734 PIGBQ92521 554 aa21.76■■□□□ 1.07
EXD3-212ENST00000491734 CDCA7Q9BWT1 371 aaPredicted RBP21.76■■□□□ 1.07
EXD3-212ENST00000491734 ASAP1Q9ULH1 1129 aa21.76■■□□□ 1.07
EXD3-212ENST00000491734 TTC41PQ6P2S7 1318 aa21.76■■□□□ 1.07
EXD3-212ENST00000491734 EXOC5O00471 708 aa21.75■■□□□ 1.07
EXD3-212ENST00000491734 EAF2Q96CJ1 260 aaPredicted RBP21.75■■□□□ 1.07
EXD3-212ENST00000491734 ZGPATQ8N5A5 531 aaKnown RBP21.75■■□□□ 1.07
EXD3-212ENST00000491734 ZBTB3Q9H5J0 574 aa21.75■■□□□ 1.07
EXD3-212ENST00000491734 ECHDC1Q9NTX5 307 aa21.75■■□□□ 1.07
EXD3-212ENST00000491734 NUTM2BA6NNL0 878 aaPredicted RBP21.74■■□□□ 1.07
EXD3-212ENST00000491734 NUTM2EB1AL46 878 aaPredicted RBP21.74■■□□□ 1.07
EXD3-212ENST00000491734 GLRX3O76003 335 aaKnown RBP21.74■■□□□ 1.07
EXD3-212ENST00000491734 MCM2P49736 904 aa21.74■■□□□ 1.07
EXD3-212ENST00000491734 CASP7P55210 303 aa21.74■■□□□ 1.07
EXD3-212ENST00000491734 NUTM2AQ8IVF1 878 aaPredicted RBP21.74■■□□□ 1.07
EXD3-212ENST00000491734 CNTROBQ8N137 903 aa21.74■■□□□ 1.07
EXD3-212ENST00000491734 CCDC8Q9H0W5 538 aaPredicted RBP21.74■■□□□ 1.07
EXD3-212ENST00000491734 CCDC39Q9UFE4 941 aa21.74■■□□□ 1.07
EXD3-212ENST00000491734 PALD1Q9ULE6 856 aa21.74■■□□□ 1.07
EXD3-212ENST00000491734 TLR7Q9NYK1 1049 aaKnown RBP21.74■■□□□ 1.07
EXD3-212ENST00000491734 RFX5P48382 616 aaPredicted RBP21.73■■□□□ 1.07
EXD3-212ENST00000491734 TMEM63CQ9P1W3 806 aa21.73■■□□□ 1.07
EXD3-212ENST00000491734 BCL9O00512 1426 aa21.72■■□□□ 1.07
EXD3-212ENST00000491734 MTERF4Q7Z6M4 381 aaKnown RBP21.72■■□□□ 1.07
EXD3-212ENST00000491734 AFDNP55196 1824 aaKnown RBP21.72■■□□□ 1.07
EXD3-212ENST00000491734 ATG3Q9NT62 314 aa21.72■■□□□ 1.07
EXD3-212ENST00000491734 SPATA31A5Q5VU36 1347 aa21.72■■□□□ 1.07
EXD3-212ENST00000491734 SPATA31A7Q8IWB4 1347 aa21.72■■□□□ 1.07
EXD3-212ENST00000491734 NUP188Q5SRE5 1749 aa21.72■■□□□ 1.07
EXD3-212ENST00000491734 RABL6Q3YEC7 729 aaPredicted RBP21.71■■□□□ 1.07
EXD3-212ENST00000491734 DNAJC10Q8IXB1 793 aa21.71■■□□□ 1.07
EXD3-212ENST00000491734 R3HCC1Q9Y3T6 440 aaKnown RBP21.71■■□□□ 1.07
EXD3-212ENST00000491734 DOT1LQ8TEK3 1739 aa21.71■■□□□ 1.07
EXD3-212ENST00000491734 PTPN12Q05209 780 aaKnown RBP21.71■■□□□ 1.07
EXD3-212ENST00000491734 RBM27Q9P2N5 1060 aaKnown RBP21.71■■□□□ 1.07
EXD3-212ENST00000491734 H7C1W4 665 aa21.7■■□□□ 1.06
EXD3-212ENST00000491734 CUL4AQ13619 759 aa21.7■■□□□ 1.06
EXD3-212ENST00000491734 GPATCH3Q96I76 525 aa21.7■■□□□ 1.06
EXD3-212ENST00000491734 DYNC1I1O14576 645 aa21.7■■□□□ 1.06
EXD3-212ENST00000491734 IL17RAQ96F46 866 aa21.7■■□□□ 1.06
EXD3-212ENST00000491734 COPRSQ9NQ92 184 aa21.7■■□□□ 1.06
EXD3-212ENST00000491734 ZNF330Q9Y3S2 320 aaPredicted RBP21.7■■□□□ 1.06
EXD3-212ENST00000491734 JCADQ9P266 1359 aa21.69■■□□□ 1.06
EXD3-212ENST00000491734 SGSM2O43147 1006 aa21.69■■□□□ 1.06
EXD3-212ENST00000491734 BRD1O95696 1058 aa21.69■■□□□ 1.06
EXD3-212ENST00000491734 CWC25Q9NXE8 425 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms